Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.66□□□□□ -1.82
CHMP4CQ96CF2 AC104260.1-201ENST00000616660 539 ntBASIC3.66□□□□□ -1.82
CHMP4CQ96CF2 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.66□□□□□ -1.82
CHMP4CQ96CF2 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.66□□□□□ -1.82
CHMP4CQ96CF2 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
CHMP4CQ96CF2 GABRG2-229ENST00000641017 3628 ntBASIC3.65□□□□□ -1.82
CHMP4CQ96CF2 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.65□□□□□ -1.83
CHMP4CQ96CF2 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
CHMP4CQ96CF2 SNORD73A-201ENST00000386062 65 ntBASIC3.65□□□□□ -1.83
CHMP4CQ96CF2 RNU6-750P-201ENST00000390946 107 ntBASIC3.65□□□□□ -1.83
CHMP4CQ96CF2 SNORD56-201ENST00000413522 71 ntBASIC3.65□□□□□ -1.83
CHMP4CQ96CF2 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.65□□□□□ -1.83
CHMP4CQ96CF2 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
CHMP4CQ96CF2 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.65□□□□□ -1.83
CHMP4CQ96CF2 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC3.65□□□□□ -1.83
CHMP4CQ96CF2 AL049873.1-201ENST00000480540 376 ntBASIC3.65□□□□□ -1.83
CHMP4CQ96CF2 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC3.65□□□□□ -1.83
CHMP4CQ96CF2 RPS27P26-201ENST00000494583 239 ntBASIC3.65□□□□□ -1.83
CHMP4CQ96CF2 RNU6-875P-201ENST00000516488 106 ntBASIC3.65□□□□□ -1.83
CHMP4CQ96CF2 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC3.65□□□□□ -1.83
CHMP4CQ96CF2 AP005597.4-201ENST00000526762 229 ntBASIC3.65□□□□□ -1.83
CHMP4CQ96CF2 AC026371.1-201ENST00000551867 419 ntBASIC3.65□□□□□ -1.83
CHMP4CQ96CF2 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.65□□□□□ -1.83
CHMP4CQ96CF2 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.65□□□□□ -1.83
CHMP4CQ96CF2 MIR4506-201ENST00000584693 77 ntBASIC3.65□□□□□ -1.83
CHMP4CQ96CF2 Y_RNA.804-201ENST00000615262 101 ntBASIC3.65□□□□□ -1.83
CHMP4CQ96CF2 AL137790.1-201ENST00000634283 177 ntBASIC3.65□□□□□ -1.83
CHMP4CQ96CF2 AC110079.1-202ENST00000635213 138 ntBASIC3.65□□□□□ -1.83
CHMP4CQ96CF2 AC010889.1-201ENST00000566193 2666 ntBASIC3.65□□□□□ -1.83
CHMP4CQ96CF2 AC091564.4-201ENST00000533934 2194 ntBASIC3.65□□□□□ -1.83
CHMP4CQ96CF2 AC009487.2-201ENST00000420969 6821 ntBASIC3.64□□□□□ -1.83
CHMP4CQ96CF2 Y_RNA.70-201ENST00000362886 110 ntBASIC3.64□□□□□ -1.83
CHMP4CQ96CF2 RNU6-78P-201ENST00000362897 107 ntBASIC3.64□□□□□ -1.83
CHMP4CQ96CF2 SNORD81.2-201ENST00000365153 76 ntBASIC3.64□□□□□ -1.83
CHMP4CQ96CF2 AL445529.1-201ENST00000398713 389 ntBASIC3.64□□□□□ -1.83
CHMP4CQ96CF2 PDCL2P1-201ENST00000419302 352 ntBASIC3.64□□□□□ -1.83
CHMP4CQ96CF2 AL139396.1-201ENST00000421137 167 ntBASIC3.64□□□□□ -1.83
CHMP4CQ96CF2 AL139281.1-201ENST00000422120 335 ntBASIC3.64□□□□□ -1.83
CHMP4CQ96CF2 AC022018.1-201ENST00000430685 241 ntBASIC3.64□□□□□ -1.83
CHMP4CQ96CF2 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.64□□□□□ -1.83
CHMP4CQ96CF2 AC093019.1-201ENST00000443135 252 ntBASIC3.64□□□□□ -1.83
CHMP4CQ96CF2 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC3.64□□□□□ -1.83
CHMP4CQ96CF2 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.64□□□□□ -1.83
CHMP4CQ96CF2 MRPL42P6-201ENST00000486397 371 ntBASIC3.64□□□□□ -1.83
CHMP4CQ96CF2 RNU6-377P-201ENST00000515965 102 ntBASIC3.64□□□□□ -1.83
CHMP4CQ96CF2 RNU6-507P-201ENST00000516045 100 ntBASIC3.64□□□□□ -1.83
CHMP4CQ96CF2 AC104576.1-201ENST00000524225 88 ntBASIC3.64□□□□□ -1.83
CHMP4CQ96CF2 AC007151.1-201ENST00000572774 483 ntBASIC3.64□□□□□ -1.83
CHMP4CQ96CF2 MIR4325-201ENST00000583049 90 ntBASIC3.64□□□□□ -1.83
CHMP4CQ96CF2 AC023043.2-201ENST00000589678 1026 ntBASIC3.64□□□□□ -1.83
CHMP4CQ96CF2 AC243960.4-201ENST00000600532 288 ntBASIC3.64□□□□□ -1.83
CHMP4CQ96CF2 AC004832.5-201ENST00000608677 401 ntBASIC3.64□□□□□ -1.83
CHMP4CQ96CF2 RMST_7.1-201ENST00000621935 268 ntBASIC3.64□□□□□ -1.83
CHMP4CQ96CF2 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.64□□□□□ -1.83
CHMP4CQ96CF2 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CHMP4CQ96CF2 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.63□□□□□ -1.83
CHMP4CQ96CF2 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CHMP4CQ96CF2 RNU6-562P-201ENST00000362731 107 ntBASIC3.63□□□□□ -1.83
CHMP4CQ96CF2 Y_RNA.142-201ENST00000363491 102 ntBASIC3.63□□□□□ -1.83
CHMP4CQ96CF2 SNORA54-201ENST00000384281 123 ntBASIC3.63□□□□□ -1.83
CHMP4CQ96CF2 RNU6-19P-201ENST00000384718 107 ntBASIC3.63□□□□□ -1.83
CHMP4CQ96CF2 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
CHMP4CQ96CF2 FTH1P15-201ENST00000406984 280 ntBASIC3.63□□□□□ -1.83
CHMP4CQ96CF2 RN7SKP58-201ENST00000411010 305 ntBASIC3.63□□□□□ -1.83
CHMP4CQ96CF2 AC096664.2-201ENST00000411843 406 ntBASIC3.63□□□□□ -1.83
CHMP4CQ96CF2 NCOR1P3-201ENST00000420479 303 ntBASIC3.63□□□□□ -1.83
CHMP4CQ96CF2 PTGES3P4-201ENST00000426243 356 ntBASIC3.63□□□□□ -1.83
CHMP4CQ96CF2 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.63□□□□□ -1.83
CHMP4CQ96CF2 SNAP23P1-201ENST00000433229 246 ntBASIC3.63□□□□□ -1.83
CHMP4CQ96CF2 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC3.63□□□□□ -1.83
CHMP4CQ96CF2 AC107626.1-201ENST00000471084 183 ntBASIC3.63□□□□□ -1.83
CHMP4CQ96CF2 RPL23AP49-201ENST00000492925 468 ntBASIC3.63□□□□□ -1.83
CHMP4CQ96CF2 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC3.63□□□□□ -1.83
CHMP4CQ96CF2 AC103851.1-201ENST00000506833 274 ntBASIC3.63□□□□□ -1.83
CHMP4CQ96CF2 AC008526.1-201ENST00000509149 338 ntBASIC3.63□□□□□ -1.83
CHMP4CQ96CF2 RAC1P5-201ENST00000512182 576 ntBASIC3.63□□□□□ -1.83
CHMP4CQ96CF2 SNORA43.2-201ENST00000516652 128 ntBASIC3.63□□□□□ -1.83
CHMP4CQ96CF2 ACA59.2-201ENST00000517061 156 ntBASIC3.63□□□□□ -1.83
CHMP4CQ96CF2 AC010186.2-204ENST00000537668 439 ntBASIC3.63□□□□□ -1.83
CHMP4CQ96CF2 UBE2Q2P8-201ENST00000560644 102 ntBASIC3.63□□□□□ -1.83
CHMP4CQ96CF2 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.63□□□□□ -1.83
CHMP4CQ96CF2 AC138761.3-201ENST00000579993 334 ntBASIC3.63□□□□□ -1.83
CHMP4CQ96CF2 AC100830.2-201ENST00000581636 240 ntBASIC3.63□□□□□ -1.83
CHMP4CQ96CF2 AC005261.5-201ENST00000596280 355 ntBASIC3.63□□□□□ -1.83
CHMP4CQ96CF2 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.63□□□□□ -1.83
CHMP4CQ96CF2 AC024153.1-201ENST00000603103 365 ntBASIC3.63□□□□□ -1.83
CHMP4CQ96CF2 AL137843.1-201ENST00000605078 385 ntBASIC3.63□□□□□ -1.83
CHMP4CQ96CF2 AC025253.1-201ENST00000613623 543 ntBASIC3.63□□□□□ -1.83
CHMP4CQ96CF2 AL138726.1-201ENST00000614873 333 ntBASIC3.63□□□□□ -1.83
CHMP4CQ96CF2 uc_338.15-201ENST00000615470 191 ntBASIC3.63□□□□□ -1.83
CHMP4CQ96CF2 AC010378.1-201ENST00000619270 362 ntBASIC3.63□□□□□ -1.83
CHMP4CQ96CF2 AL035425.3-201ENST00000564206 4996 ntBASIC3.63□□□□□ -1.83
CHMP4CQ96CF2 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
CHMP4CQ96CF2 ATP8A2P2-201ENST00000437678 1568 ntBASIC3.63□□□□□ -1.83
CHMP4CQ96CF2 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
CHMP4CQ96CF2 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CHMP4CQ96CF2 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CHMP4CQ96CF2 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.62□□□□□ -1.83
CHMP4CQ96CF2 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
CHMP4CQ96CF2 Y_RNA.212-201ENST00000364177 102 ntBASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 115.3 ms