Protein–RNA interactions for Protein: Q92541

RTF1, RNA polymerase-associated protein RTF1 homolog, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1Q92541 Y_RNA.711-201ENST00000516993 102 ntBASIC3.93□□□□□ -1.78
RTF1Q92541 AC009902.1-201ENST00000519351 183 ntBASIC3.93□□□□□ -1.78
RTF1Q92541 AP000654.2-201ENST00000605633 586 ntBASIC3.93□□□□□ -1.78
RTF1Q92541 AL161423.1-201ENST00000613700 262 ntBASIC3.93□□□□□ -1.78
RTF1Q92541 PISRT1.1-201ENST00000616930 107 ntBASIC3.93□□□□□ -1.78
RTF1Q92541 ZNF826P-207ENST00000622273 1910 ntBASIC3.93□□□□□ -1.78
RTF1Q92541 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
RTF1Q92541 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.93□□□□□ -1.78
RTF1Q92541 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.93□□□□□ -1.78
RTF1Q92541 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
RTF1Q92541 MTND5P19-201ENST00000424872 1794 ntBASIC3.92□□□□□ -1.78
RTF1Q92541 RNA5SP383-201ENST00000362934 120 ntBASIC3.92□□□□□ -1.78
RTF1Q92541 Y_RNA.111-201ENST00000363248 100 ntBASIC3.92□□□□□ -1.78
RTF1Q92541 Y_RNA.132-201ENST00000363421 102 ntBASIC3.92□□□□□ -1.78
RTF1Q92541 SNORD56.3-201ENST00000363507 71 ntBASIC3.92□□□□□ -1.78
RTF1Q92541 RNU6-805P-201ENST00000365643 106 ntBASIC3.92□□□□□ -1.78
RTF1Q92541 RNU6-1197P-201ENST00000391183 107 ntBASIC3.92□□□□□ -1.78
RTF1Q92541 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.92□□□□□ -1.78
RTF1Q92541 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
RTF1Q92541 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC3.92□□□□□ -1.78
RTF1Q92541 AC092047.1-201ENST00000424997 240 ntBASIC3.92□□□□□ -1.78
RTF1Q92541 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.92□□□□□ -1.78
RTF1Q92541 AC107083.1-201ENST00000439643 279 ntBASIC3.92□□□□□ -1.78
RTF1Q92541 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.92□□□□□ -1.78
RTF1Q92541 CECR9-201ENST00000453421 199 ntBASIC3.92□□□□□ -1.78
RTF1Q92541 SNORD5.1-201ENST00000458800 75 ntBASIC3.92□□□□□ -1.78
RTF1Q92541 RN7SL20P-201ENST00000488827 297 ntBASIC3.92□□□□□ -1.78
RTF1Q92541 RPL30P5-201ENST00000494923 336 ntBASIC3.92□□□□□ -1.78
RTF1Q92541 AC097473.1-201ENST00000508142 408 ntBASIC3.92□□□□□ -1.78
RTF1Q92541 RNU4ATAC7P-201ENST00000516280 125 ntBASIC3.92□□□□□ -1.78
RTF1Q92541 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC3.92□□□□□ -1.78
RTF1Q92541 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC3.92□□□□□ -1.78
RTF1Q92541 SNRPGP18-201ENST00000553000 214 ntBASIC3.92□□□□□ -1.78
RTF1Q92541 AC136601.2-201ENST00000604356 474 ntBASIC3.92□□□□□ -1.78
RTF1Q92541 ELOCP5-201ENST00000604924 333 ntBASIC3.92□□□□□ -1.78
RTF1Q92541 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC3.92□□□□□ -1.78
RTF1Q92541 SCARNA15.3-201ENST00000626315 122 ntBASIC3.92□□□□□ -1.78
RTF1Q92541 SCARNA4.1-201ENST00000628597 123 ntBASIC3.92□□□□□ -1.78
RTF1Q92541 AC009487.2-201ENST00000420969 6821 ntBASIC3.92□□□□□ -1.78
RTF1Q92541 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
RTF1Q92541 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.92□□□□□ -1.78
RTF1Q92541 SNORA80A-201ENST00000363922 136 ntBASIC3.91□□□□□ -1.78
RTF1Q92541 MIR493-201ENST00000385254 89 ntBASIC3.91□□□□□ -1.78
RTF1Q92541 RNA5SP129-201ENST00000410276 118 ntBASIC3.91□□□□□ -1.78
RTF1Q92541 RNU6-1050P-201ENST00000410388 107 ntBASIC3.91□□□□□ -1.78
RTF1Q92541 Y_RNA.646-201ENST00000410980 101 ntBASIC3.91□□□□□ -1.78
RTF1Q92541 AL592148.1-201ENST00000413568 445 ntBASIC3.91□□□□□ -1.78
RTF1Q92541 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC3.91□□□□□ -1.78
RTF1Q92541 NDUFB4P6-201ENST00000436819 366 ntBASIC3.91□□□□□ -1.78
RTF1Q92541 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.91□□□□□ -1.78
RTF1Q92541 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC3.91□□□□□ -1.78
RTF1Q92541 RPS4XP13-201ENST00000483219 789 ntBASIC3.91□□□□□ -1.78
RTF1Q92541 AL163540.1-201ENST00000485382 386 ntBASIC3.91□□□□□ -1.78
RTF1Q92541 RN7SKP289-201ENST00000517244 295 ntBASIC3.91□□□□□ -1.78
RTF1Q92541 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
RTF1Q92541 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC3.91□□□□□ -1.78
RTF1Q92541 AC022634.1-201ENST00000520765 532 ntBASIC3.91□□□□□ -1.78
RTF1Q92541 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC3.91□□□□□ -1.78
RTF1Q92541 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
RTF1Q92541 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC3.91□□□□□ -1.78
RTF1Q92541 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC3.91□□□□□ -1.78
RTF1Q92541 AC007318.2-201ENST00000620999 243 ntBASIC3.91□□□□□ -1.78
RTF1Q92541 uc_338.22-201ENST00000622722 187 ntBASIC3.91□□□□□ -1.78
RTF1Q92541 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.91□□□□□ -1.78
RTF1Q92541 SNORA50A-202ENST00000629536 136 ntBASIC3.91□□□□□ -1.78
RTF1Q92541 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
RTF1Q92541 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
RTF1Q92541 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.91□□□□□ -1.78
RTF1Q92541 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
RTF1Q92541 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.9□□□□□ -1.78
RTF1Q92541 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.9□□□□□ -1.78
RTF1Q92541 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
RTF1Q92541 AL049641.1-201ENST00000441055 1948 ntBASIC3.9□□□□□ -1.78
RTF1Q92541 AC090740.1-201ENST00000623193 2262 ntBASIC3.9□□□□□ -1.79
RTF1Q92541 RNA5SP295-201ENST00000362655 121 ntBASIC3.9□□□□□ -1.79
RTF1Q92541 Y_RNA.112-201ENST00000363250 102 ntBASIC3.9□□□□□ -1.79
RTF1Q92541 RNU6-384P-201ENST00000364900 104 ntBASIC3.9□□□□□ -1.79
RTF1Q92541 Y_RNA.594-201ENST00000410373 140 ntBASIC3.9□□□□□ -1.79
RTF1Q92541 RNA5SP274-201ENST00000410484 108 ntBASIC3.9□□□□□ -1.79
RTF1Q92541 RNA5SP293-201ENST00000410527 113 ntBASIC3.9□□□□□ -1.79
RTF1Q92541 RNU2-68P-201ENST00000410878 191 ntBASIC3.9□□□□□ -1.79
RTF1Q92541 Y_RNA.623-201ENST00000411128 95 ntBASIC3.9□□□□□ -1.79
RTF1Q92541 AL096701.2-201ENST00000416920 238 ntBASIC3.9□□□□□ -1.79
RTF1Q92541 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC3.9□□□□□ -1.79
RTF1Q92541 AL627311.1-201ENST00000431514 115 ntBASIC3.9□□□□□ -1.79
RTF1Q92541 RPL23AP22-201ENST00000437556 453 ntBASIC3.9□□□□□ -1.79
RTF1Q92541 AC025750.2-201ENST00000442609 450 ntBASIC3.9□□□□□ -1.79
RTF1Q92541 AL137792.2-201ENST00000443484 235 ntBASIC3.9□□□□□ -1.79
RTF1Q92541 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.9□□□□□ -1.79
RTF1Q92541 AC125238.1-201ENST00000448842 249 ntBASIC3.9□□□□□ -1.79
RTF1Q92541 RPS23P3-201ENST00000470993 430 ntBASIC3.9□□□□□ -1.79
RTF1Q92541 AC083906.5-201ENST00000503722 328 ntBASIC3.9□□□□□ -1.79
RTF1Q92541 SCGB1D5P-201ENST00000515134 247 ntBASIC3.9□□□□□ -1.79
RTF1Q92541 RNU6-1282P-201ENST00000516735 96 ntBASIC3.9□□□□□ -1.79
RTF1Q92541 RNA5SP165-201ENST00000517142 115 ntBASIC3.9□□□□□ -1.79
RTF1Q92541 AC025755.1-201ENST00000521306 278 ntBASIC3.9□□□□□ -1.79
RTF1Q92541 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
RTF1Q92541 AC107016.2-201ENST00000547968 190 ntBASIC3.9□□□□□ -1.79
RTF1Q92541 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.9□□□□□ -1.79
RTF1Q92541 AC006504.6-201ENST00000590142 199 ntBASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 124 ms