Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 RPL21P2-201ENST00000440049 481 ntBASIC3.49□□□□□ -1.85
SIMC1Q8NDZ2 AC011816.1-201ENST00000441346 546 ntBASIC3.49□□□□□ -1.85
SIMC1Q8NDZ2 RPS24P13-201ENST00000442520 397 ntBASIC3.49□□□□□ -1.85
SIMC1Q8NDZ2 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC3.49□□□□□ -1.85
SIMC1Q8NDZ2 AC010099.1-201ENST00000455434 375 ntBASIC3.49□□□□□ -1.85
SIMC1Q8NDZ2 RPL21P41-201ENST00000459863 264 ntBASIC3.49□□□□□ -1.85
SIMC1Q8NDZ2 RNU6-928P-201ENST00000516876 104 ntBASIC3.49□□□□□ -1.85
SIMC1Q8NDZ2 AC022616.4-201ENST00000522985 181 ntBASIC3.49□□□□□ -1.85
SIMC1Q8NDZ2 RNU1-30P-201ENST00000606575 163 ntBASIC3.49□□□□□ -1.85
SIMC1Q8NDZ2 MIR15A-201ENST00000607334 83 ntBASIC3.49□□□□□ -1.85
SIMC1Q8NDZ2 AC099778.2-201ENST00000610904 211 ntBASIC3.49□□□□□ -1.85
SIMC1Q8NDZ2 AC099506.2-201ENST00000623074 221 ntBASIC3.49□□□□□ -1.85
SIMC1Q8NDZ2 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
SIMC1Q8NDZ2 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.48□□□□□ -1.85
SIMC1Q8NDZ2 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC3.48□□□□□ -1.85
SIMC1Q8NDZ2 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.48□□□□□ -1.85
SIMC1Q8NDZ2 Y_RNA.152-201ENST00000363578 100 ntBASIC3.48□□□□□ -1.85
SIMC1Q8NDZ2 Y_RNA.210-201ENST00000364161 110 ntBASIC3.48□□□□□ -1.85
SIMC1Q8NDZ2 RNU6-198P-201ENST00000384258 104 ntBASIC3.48□□□□□ -1.85
SIMC1Q8NDZ2 RAB9AP3-201ENST00000412737 573 ntBASIC3.48□□□□□ -1.85
SIMC1Q8NDZ2 RPL21P90-201ENST00000415692 466 ntBASIC3.48□□□□□ -1.85
SIMC1Q8NDZ2 AC017079.2-201ENST00000416102 485 ntBASIC3.48□□□□□ -1.85
SIMC1Q8NDZ2 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC3.48□□□□□ -1.85
SIMC1Q8NDZ2 HMGN2P30-201ENST00000423237 256 ntBASIC3.48□□□□□ -1.85
SIMC1Q8NDZ2 AC073063.1-201ENST00000434352 607 ntBASIC3.48□□□□□ -1.85
SIMC1Q8NDZ2 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC3.48□□□□□ -1.85
SIMC1Q8NDZ2 DYNLT3P2-201ENST00000442517 295 ntBASIC3.48□□□□□ -1.85
SIMC1Q8NDZ2 RAB9AP1-201ENST00000449393 573 ntBASIC3.48□□□□□ -1.85
SIMC1Q8NDZ2 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC3.48□□□□□ -1.85
SIMC1Q8NDZ2 snoU13.28-201ENST00000459235 104 ntBASIC3.48□□□□□ -1.85
SIMC1Q8NDZ2 AC114801.2-201ENST00000503825 781 ntBASIC3.48□□□□□ -1.85
SIMC1Q8NDZ2 AC105758.1-201ENST00000506038 399 ntBASIC3.48□□□□□ -1.85
SIMC1Q8NDZ2 RNY3P15-201ENST00000516297 97 ntBASIC3.48□□□□□ -1.85
SIMC1Q8NDZ2 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
SIMC1Q8NDZ2 AC026403.1-201ENST00000518938 295 ntBASIC3.48□□□□□ -1.85
SIMC1Q8NDZ2 AC104576.1-201ENST00000524225 88 ntBASIC3.48□□□□□ -1.85
SIMC1Q8NDZ2 AC109446.1-201ENST00000566172 220 ntBASIC3.48□□□□□ -1.85
SIMC1Q8NDZ2 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC3.48□□□□□ -1.85
SIMC1Q8NDZ2 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC3.48□□□□□ -1.85
SIMC1Q8NDZ2 AL121772.2-201ENST00000614331 297 ntBASIC3.48□□□□□ -1.85
SIMC1Q8NDZ2 AC078938.1-201ENST00000620993 318 ntBASIC3.48□□□□□ -1.85
SIMC1Q8NDZ2 MIR8062-201ENST00000621515 85 ntBASIC3.48□□□□□ -1.85
SIMC1Q8NDZ2 AC009093.8-201ENST00000641769 292 ntBASIC3.48□□□□□ -1.85
SIMC1Q8NDZ2 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.48□□□□□ -1.85
SIMC1Q8NDZ2 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
SIMC1Q8NDZ2 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.48□□□□□ -1.85
SIMC1Q8NDZ2 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.48□□□□□ -1.85
SIMC1Q8NDZ2 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.47□□□□□ -1.85
SIMC1Q8NDZ2 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.47□□□□□ -1.85
SIMC1Q8NDZ2 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
SIMC1Q8NDZ2 FTLP6-201ENST00000355274 422 ntBASIC3.47□□□□□ -1.85
SIMC1Q8NDZ2 RNU6-874P-201ENST00000362390 105 ntBASIC3.47□□□□□ -1.85
SIMC1Q8NDZ2 RNU6-512P-201ENST00000364438 103 ntBASIC3.47□□□□□ -1.85
SIMC1Q8NDZ2 Y_RNA.314-201ENST00000365114 102 ntBASIC3.47□□□□□ -1.85
SIMC1Q8NDZ2 Y_RNA.447-201ENST00000384184 113 ntBASIC3.47□□□□□ -1.85
SIMC1Q8NDZ2 Y_RNA.489-201ENST00000384410 101 ntBASIC3.47□□□□□ -1.85
SIMC1Q8NDZ2 MIR1252-201ENST00000408861 65 ntBASIC3.47□□□□□ -1.85
SIMC1Q8NDZ2 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC3.47□□□□□ -1.85
SIMC1Q8NDZ2 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.47□□□□□ -1.85
SIMC1Q8NDZ2 RPS15AP10-201ENST00000432472 382 ntBASIC3.47□□□□□ -1.85
SIMC1Q8NDZ2 HSPD1P21-201ENST00000436541 245 ntBASIC3.47□□□□□ -1.85
SIMC1Q8NDZ2 OSTCP8-201ENST00000445117 448 ntBASIC3.47□□□□□ -1.85
SIMC1Q8NDZ2 RPL37P4-201ENST00000448908 268 ntBASIC3.47□□□□□ -1.85
SIMC1Q8NDZ2 CHEK2P4-201ENST00000450340 246 ntBASIC3.47□□□□□ -1.85
SIMC1Q8NDZ2 AL031183.1-201ENST00000457667 207 ntBASIC3.47□□□□□ -1.85
SIMC1Q8NDZ2 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.47□□□□□ -1.85
SIMC1Q8NDZ2 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.47□□□□□ -1.85
SIMC1Q8NDZ2 RNU6-408P-201ENST00000515910 100 ntBASIC3.47□□□□□ -1.85
SIMC1Q8NDZ2 RNU6-1143P-201ENST00000516125 104 ntBASIC3.47□□□□□ -1.85
SIMC1Q8NDZ2 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.47□□□□□ -1.85
SIMC1Q8NDZ2 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
SIMC1Q8NDZ2 MIR4738-201ENST00000579134 87 ntBASIC3.47□□□□□ -1.85
SIMC1Q8NDZ2 MIR4298-201ENST00000584380 73 ntBASIC3.47□□□□□ -1.85
SIMC1Q8NDZ2 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC3.47□□□□□ -1.85
SIMC1Q8NDZ2 Z98751.3-201ENST00000604447 521 ntBASIC3.47□□□□□ -1.85
SIMC1Q8NDZ2 RNU6-85P-201ENST00000605989 107 ntBASIC3.47□□□□□ -1.85
SIMC1Q8NDZ2 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
SIMC1Q8NDZ2 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.47□□□□□ -1.85
SIMC1Q8NDZ2 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
SIMC1Q8NDZ2 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.47□□□□□ -1.85
SIMC1Q8NDZ2 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
SIMC1Q8NDZ2 RNA5SP124-201ENST00000362739 110 ntBASIC3.46□□□□□ -1.86
SIMC1Q8NDZ2 SNORD14.1-201ENST00000365609 90 ntBASIC3.46□□□□□ -1.86
SIMC1Q8NDZ2 RNU6-472P-201ENST00000384299 107 ntBASIC3.46□□□□□ -1.86
SIMC1Q8NDZ2 SNORD73A-201ENST00000386062 65 ntBASIC3.46□□□□□ -1.86
SIMC1Q8NDZ2 RNA5SP424-201ENST00000390988 115 ntBASIC3.46□□□□□ -1.86
SIMC1Q8NDZ2 AC099548.1-201ENST00000421443 426 ntBASIC3.46□□□□□ -1.86
SIMC1Q8NDZ2 BX276092.3-201ENST00000424182 230 ntBASIC3.46□□□□□ -1.86
SIMC1Q8NDZ2 HMGB1P9-201ENST00000429856 646 ntBASIC3.46□□□□□ -1.86
SIMC1Q8NDZ2 FABP5P15-201ENST00000453566 214 ntBASIC3.46□□□□□ -1.86
SIMC1Q8NDZ2 PCMTD1P1-201ENST00000455560 355 ntBASIC3.46□□□□□ -1.86
SIMC1Q8NDZ2 RNU7-23P-201ENST00000459465 62 ntBASIC3.46□□□□□ -1.86
SIMC1Q8NDZ2 AL133162.1-201ENST00000463228 453 ntBASIC3.46□□□□□ -1.86
SIMC1Q8NDZ2 AC008571.1-201ENST00000467232 300 ntBASIC3.46□□□□□ -1.86
SIMC1Q8NDZ2 AC018437.1-201ENST00000492214 406 ntBASIC3.46□□□□□ -1.86
SIMC1Q8NDZ2 MTND3P25-201ENST00000509243 135 ntBASIC3.46□□□□□ -1.86
SIMC1Q8NDZ2 RNA5SP471-201ENST00000516971 106 ntBASIC3.46□□□□□ -1.86
SIMC1Q8NDZ2 NACAP3-201ENST00000552100 481 ntBASIC3.46□□□□□ -1.86
SIMC1Q8NDZ2 MIR5692A1-201ENST00000580523 69 ntBASIC3.46□□□□□ -1.86
SIMC1Q8NDZ2 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC3.46□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 137.1 ms