Protein–RNA interactions for Protein: Q8NB14

USP38, Ubiquitin carboxyl-terminal hydrolase 38, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP38Q8NB14 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.14□□□□□ -1.91
USP38Q8NB14 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC3.14□□□□□ -1.91
USP38Q8NB14 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC3.14□□□□□ -1.91
USP38Q8NB14 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC3.14□□□□□ -1.91
USP38Q8NB14 AC133134.1-201ENST00000466800 359 ntBASIC3.14□□□□□ -1.91
USP38Q8NB14 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC3.14□□□□□ -1.91
USP38Q8NB14 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC3.14□□□□□ -1.91
USP38Q8NB14 AL138976.2-201ENST00000563989 694 ntBASIC3.14□□□□□ -1.91
USP38Q8NB14 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC3.14□□□□□ -1.91
USP38Q8NB14 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.14□□□□□ -1.91
USP38Q8NB14 AC008739.2-201ENST00000597006 317 ntBASIC3.14□□□□□ -1.91
USP38Q8NB14 AC092747.3-201ENST00000603769 301 ntBASIC3.14□□□□□ -1.91
USP38Q8NB14 USP12-203ENST00000620323 349 ntTSL 3 BASIC3.14□□□□□ -1.91
USP38Q8NB14 MIR3662-201ENST00000637030 95 ntBASIC3.14□□□□□ -1.91
USP38Q8NB14 AC108206.1-201ENST00000570186 4159 ntBASIC3.14□□□□□ -1.91
USP38Q8NB14 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
USP38Q8NB14 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
USP38Q8NB14 RNU6-858P-201ENST00000362436 107 ntBASIC3.13□□□□□ -1.91
USP38Q8NB14 RNU6-451P-201ENST00000362921 107 ntBASIC3.13□□□□□ -1.91
USP38Q8NB14 SNORD56.5-201ENST00000364281 72 ntBASIC3.13□□□□□ -1.91
USP38Q8NB14 RNU6-384P-201ENST00000364900 104 ntBASIC3.13□□□□□ -1.91
USP38Q8NB14 Y_RNA.378-201ENST00000365652 113 ntBASIC3.13□□□□□ -1.91
USP38Q8NB14 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
USP38Q8NB14 RNA5SP492-201ENST00000411330 114 ntBASIC3.13□□□□□ -1.91
USP38Q8NB14 AL161651.1-201ENST00000440882 223 ntBASIC3.13□□□□□ -1.91
USP38Q8NB14 NFU1P2-201ENST00000448700 469 ntBASIC3.13□□□□□ -1.91
USP38Q8NB14 DYNLL1P5-201ENST00000467158 270 ntBASIC3.13□□□□□ -1.91
USP38Q8NB14 RPL23AP11-201ENST00000475260 469 ntBASIC3.13□□□□□ -1.91
USP38Q8NB14 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC3.13□□□□□ -1.91
USP38Q8NB14 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.13□□□□□ -1.91
USP38Q8NB14 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC3.13□□□□□ -1.91
USP38Q8NB14 MIR4424-201ENST00000585257 86 ntBASIC3.13□□□□□ -1.91
USP38Q8NB14 AC002044.1-201ENST00000606707 158 ntBASIC3.13□□□□□ -1.91
USP38Q8NB14 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC3.13□□□□□ -1.91
USP38Q8NB14 AL020991.1-201ENST00000612314 373 ntBASIC3.13□□□□□ -1.91
USP38Q8NB14 AC024614.3-201ENST00000637860 256 ntBASIC3.13□□□□□ -1.91
USP38Q8NB14 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
USP38Q8NB14 AC010889.1-201ENST00000566193 2666 ntBASIC3.12□□□□□ -1.91
USP38Q8NB14 Y_RNA.4-201ENST00000362333 112 ntBASIC3.12□□□□□ -1.91
USP38Q8NB14 Y_RNA.231-201ENST00000364358 102 ntBASIC3.12□□□□□ -1.91
USP38Q8NB14 Y_RNA.373-201ENST00000365600 103 ntBASIC3.12□□□□□ -1.91
USP38Q8NB14 RNU6-607P-201ENST00000411283 108 ntBASIC3.12□□□□□ -1.91
USP38Q8NB14 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC3.12□□□□□ -1.91
USP38Q8NB14 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC3.12□□□□□ -1.91
USP38Q8NB14 NDUFB1P2-201ENST00000449477 176 ntBASIC3.12□□□□□ -1.91
USP38Q8NB14 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC3.12□□□□□ -1.91
USP38Q8NB14 RNU7-167P-201ENST00000459160 62 ntBASIC3.12□□□□□ -1.91
USP38Q8NB14 AC011005.2-201ENST00000487324 359 ntBASIC3.12□□□□□ -1.91
USP38Q8NB14 RPL38P4-201ENST00000502376 214 ntBASIC3.12□□□□□ -1.91
USP38Q8NB14 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC3.12□□□□□ -1.91
USP38Q8NB14 MRPS36P2-201ENST00000512569 299 ntBASIC3.12□□□□□ -1.91
USP38Q8NB14 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC3.12□□□□□ -1.91
USP38Q8NB14 CENPUP1-201ENST00000526649 1202 ntBASIC3.12□□□□□ -1.91
USP38Q8NB14 HSPE1P20-201ENST00000538133 289 ntBASIC3.12□□□□□ -1.91
USP38Q8NB14 AP002770.2-201ENST00000543613 532 ntBASIC3.12□□□□□ -1.91
USP38Q8NB14 AL118558.2-201ENST00000556294 238 ntBASIC3.12□□□□□ -1.91
USP38Q8NB14 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC3.12□□□□□ -1.91
USP38Q8NB14 AC019159.1-201ENST00000605094 187 ntBASIC3.12□□□□□ -1.91
USP38Q8NB14 AC087045.1-201ENST00000605856 382 ntBASIC3.12□□□□□ -1.91
USP38Q8NB14 AC107871.2-201ENST00000612894 502 ntBASIC3.12□□□□□ -1.91
USP38Q8NB14 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC3.12□□□□□ -1.91
USP38Q8NB14 MIR6817-201ENST00000615588 66 ntBASIC3.12□□□□□ -1.91
USP38Q8NB14 MIR6134-201ENST00000617606 109 ntBASIC3.12□□□□□ -1.91
USP38Q8NB14 AC008669.1-201ENST00000565823 2178 ntBASIC3.12□□□□□ -1.91
USP38Q8NB14 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
USP38Q8NB14 RNA5SP68-201ENST00000363885 119 ntBASIC3.11□□□□□ -1.91
USP38Q8NB14 Y_RNA.324-201ENST00000365165 102 ntBASIC3.11□□□□□ -1.91
USP38Q8NB14 SNORD88.1-201ENST00000408684 91 ntBASIC3.11□□□□□ -1.91
USP38Q8NB14 CYCSP33-201ENST00000414485 327 ntBASIC3.11□□□□□ -1.91
USP38Q8NB14 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.11□□□□□ -1.91
USP38Q8NB14 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC3.11□□□□□ -1.91
USP38Q8NB14 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC3.11□□□□□ -1.91
USP38Q8NB14 TRAPPC2P3-201ENST00000443200 321 ntBASIC3.11□□□□□ -1.91
USP38Q8NB14 UBBP3-201ENST00000445497 241 ntBASIC3.11□□□□□ -1.91
USP38Q8NB14 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.11□□□□□ -1.91
USP38Q8NB14 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.11□□□□□ -1.91
USP38Q8NB14 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC3.11□□□□□ -1.91
USP38Q8NB14 AC026801.1-201ENST00000497178 464 ntBASIC3.11□□□□□ -1.91
USP38Q8NB14 AC116655.1-201ENST00000508324 901 ntBASIC3.11□□□□□ -1.91
USP38Q8NB14 Y_RNA.687-201ENST00000516558 91 ntBASIC3.11□□□□□ -1.91
USP38Q8NB14 OR11H5P-201ENST00000554039 926 ntBASIC3.11□□□□□ -1.91
USP38Q8NB14 LRRC37A5P-203ENST00000580181 585 ntBASIC3.11□□□□□ -1.91
USP38Q8NB14 VN1R80P-201ENST00000597126 338 ntBASIC3.11□□□□□ -1.91
USP38Q8NB14 RNU6-89P-201ENST00000606519 100 ntBASIC3.11□□□□□ -1.91
USP38Q8NB14 AL627309.6-201ENST00000606857 840 ntBASIC3.11□□□□□ -1.91
USP38Q8NB14 AC092807.2-201ENST00000609367 243 ntBASIC3.11□□□□□ -1.91
USP38Q8NB14 RMST_3.1-201ENST00000611651 109 ntBASIC3.11□□□□□ -1.91
USP38Q8NB14 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
USP38Q8NB14 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
USP38Q8NB14 RNU1-35P-201ENST00000362782 153 ntBASIC3.1□□□□□ -1.91
USP38Q8NB14 Y_RNA.248-201ENST00000364501 109 ntBASIC3.1□□□□□ -1.91
USP38Q8NB14 RNU6-750P-201ENST00000390946 107 ntBASIC3.1□□□□□ -1.91
USP38Q8NB14 RNU6-332P-201ENST00000391193 108 ntBASIC3.1□□□□□ -1.91
USP38Q8NB14 U3.37-201ENST00000408528 213 ntBASIC3.1□□□□□ -1.91
USP38Q8NB14 RNU2-3P-201ENST00000410144 191 ntBASIC3.1□□□□□ -1.91
USP38Q8NB14 POLHP1-201ENST00000411806 470 ntBASIC3.1□□□□□ -1.91
USP38Q8NB14 HNRNPDLP1-201ENST00000412834 550 ntBASIC3.1□□□□□ -1.91
USP38Q8NB14 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC3.1□□□□□ -1.91
USP38Q8NB14 ERLEC1P1-201ENST00000433806 578 ntBASIC3.1□□□□□ -1.91
USP38Q8NB14 CALM1P1-201ENST00000442082 433 ntBASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 129 ms