Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 RPL23AP3-201ENST00000453844 468 ntBASIC1.98□□□□□ -2.09
CCDC65Q8IXS2 snoU109.1-201ENST00000459339 135 ntBASIC1.98□□□□□ -2.09
CCDC65Q8IXS2 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC1.98□□□□□ -2.09
CCDC65Q8IXS2 AC090572.1-201ENST00000519251 160 ntBASIC1.98□□□□□ -2.09
CCDC65Q8IXS2 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.98□□□□□ -2.09
CCDC65Q8IXS2 MIR3945-201ENST00000581853 98 ntBASIC1.98□□□□□ -2.09
CCDC65Q8IXS2 AL138889.2-201ENST00000603883 242 ntBASIC1.98□□□□□ -2.09
CCDC65Q8IXS2 AL158032.1-201ENST00000605401 106 ntBASIC1.98□□□□□ -2.09
CCDC65Q8IXS2 AL139286.2-201ENST00000606838 396 ntBASIC1.98□□□□□ -2.09
CCDC65Q8IXS2 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC1.98□□□□□ -2.09
CCDC65Q8IXS2 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC1.98□□□□□ -2.09
CCDC65Q8IXS2 AF246928.1-201ENST00000623768 87 ntBASIC1.98□□□□□ -2.09
CCDC65Q8IXS2 AC092656.1-203ENST00000624134 423 ntBASIC1.98□□□□□ -2.09
CCDC65Q8IXS2 AL157786.1-207ENST00000627771 695 ntBASIC1.98□□□□□ -2.09
CCDC65Q8IXS2 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
CCDC65Q8IXS2 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC1.98□□□□□ -2.09
CCDC65Q8IXS2 RPS3AP3-201ENST00000411933 242 ntBASIC1.97□□□□□ -2.09
CCDC65Q8IXS2 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
CCDC65Q8IXS2 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.97□□□□□ -2.09
CCDC65Q8IXS2 MTCYBP5-201ENST00000423752 1135 ntBASIC1.97□□□□□ -2.09
CCDC65Q8IXS2 AC009961.2-201ENST00000435771 251 ntBASIC1.97□□□□□ -2.09
CCDC65Q8IXS2 MTND1P30-201ENST00000441241 901 ntBASIC1.97□□□□□ -2.09
CCDC65Q8IXS2 MTCYBP1-201ENST00000454315 1119 ntBASIC1.97□□□□□ -2.09
CCDC65Q8IXS2 AL441985.1-201ENST00000457727 251 ntBASIC1.97□□□□□ -2.09
CCDC65Q8IXS2 snoU109.2-201ENST00000459316 135 ntBASIC1.97□□□□□ -2.09
CCDC65Q8IXS2 AC117503.1-201ENST00000472241 394 ntBASIC1.97□□□□□ -2.09
CCDC65Q8IXS2 AC107032.1-201ENST00000485945 480 ntBASIC1.97□□□□□ -2.09
CCDC65Q8IXS2 RPS29P11-201ENST00000496507 171 ntBASIC1.97□□□□□ -2.09
CCDC65Q8IXS2 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC1.97□□□□□ -2.09
CCDC65Q8IXS2 AC117522.1-201ENST00000509821 380 ntBASIC1.97□□□□□ -2.09
CCDC65Q8IXS2 Y_RNA.717-201ENST00000517106 92 ntBASIC1.97□□□□□ -2.09
CCDC65Q8IXS2 LRRC34P1-201ENST00000542742 915 ntBASIC1.97□□□□□ -2.09
CCDC65Q8IXS2 ADI1P3-201ENST00000549509 470 ntBASIC1.97□□□□□ -2.09
CCDC65Q8IXS2 MTCYBP33-201ENST00000575007 1130 ntBASIC1.97□□□□□ -2.09
CCDC65Q8IXS2 MIR3618-201ENST00000580330 88 ntBASIC1.97□□□□□ -2.09
CCDC65Q8IXS2 AC012360.2-201ENST00000609349 391 ntBASIC1.97□□□□□ -2.09
CCDC65Q8IXS2 U4atac.1-201ENST00000618345 95 ntBASIC1.97□□□□□ -2.09
CCDC65Q8IXS2 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.97□□□□□ -2.09
CCDC65Q8IXS2 ANKRD20A17P-201ENST00000511745 1330 ntBASIC1.96□□□□□ -2.1
CCDC65Q8IXS2 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
CCDC65Q8IXS2 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
CCDC65Q8IXS2 RNU6-234P-201ENST00000365229 104 ntBASIC1.96□□□□□ -2.1
CCDC65Q8IXS2 RNU6-843P-201ENST00000384454 104 ntBASIC1.96□□□□□ -2.1
CCDC65Q8IXS2 AC127391.1-201ENST00000411737 98 ntBASIC1.96□□□□□ -2.1
CCDC65Q8IXS2 AC009518.2-201ENST00000418056 731 ntBASIC1.96□□□□□ -2.1
CCDC65Q8IXS2 AC008267.5-201ENST00000424928 265 ntBASIC1.96□□□□□ -2.1
CCDC65Q8IXS2 MTND5P25-201ENST00000430499 799 ntBASIC1.96□□□□□ -2.1
CCDC65Q8IXS2 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC1.96□□□□□ -2.1
CCDC65Q8IXS2 CALM1P1-201ENST00000442082 433 ntBASIC1.96□□□□□ -2.1
CCDC65Q8IXS2 AL022238.1-201ENST00000442557 355 ntBASIC1.96□□□□□ -2.1
CCDC65Q8IXS2 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC1.96□□□□□ -2.1
CCDC65Q8IXS2 MED28P2-201ENST00000475771 317 ntBASIC1.96□□□□□ -2.1
CCDC65Q8IXS2 AP001025.1-201ENST00000486139 332 ntBASIC1.96□□□□□ -2.1
CCDC65Q8IXS2 AC018868.1-201ENST00000491307 315 ntBASIC1.96□□□□□ -2.1
CCDC65Q8IXS2 RNU1-86P-201ENST00000516108 154 ntBASIC1.96□□□□□ -2.1
CCDC65Q8IXS2 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.96□□□□□ -2.1
CCDC65Q8IXS2 RNU1-107P-201ENST00000516617 154 ntBASIC1.96□□□□□ -2.1
CCDC65Q8IXS2 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.96□□□□□ -2.1
CCDC65Q8IXS2 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC1.96□□□□□ -2.1
CCDC65Q8IXS2 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC1.96□□□□□ -2.1
CCDC65Q8IXS2 AC012414.6-201ENST00000568241 401 ntBASIC1.96□□□□□ -2.1
CCDC65Q8IXS2 MIR548AC-201ENST00000585049 88 ntBASIC1.96□□□□□ -2.1
CCDC65Q8IXS2 NDUFA8P1-201ENST00000605525 367 ntBASIC1.96□□□□□ -2.1
CCDC65Q8IXS2 AC087683.2-201ENST00000611384 326 ntBASIC1.96□□□□□ -2.1
CCDC65Q8IXS2 AC093648.1-201ENST00000623546 606 ntBASIC1.96□□□□□ -2.1
CCDC65Q8IXS2 AC007494.3-201ENST00000624660 743 ntBASIC1.96□□□□□ -2.1
CCDC65Q8IXS2 RBBP8P1-201ENST00000449447 1844 ntBASIC1.96□□□□□ -2.1
CCDC65Q8IXS2 SNORA20.2-201ENST00000383922 131 ntBASIC1.95□□□□□ -2.1
CCDC65Q8IXS2 RNU6-622P-201ENST00000384272 103 ntBASIC1.95□□□□□ -2.1
CCDC65Q8IXS2 RNU6-297P-201ENST00000384636 107 ntBASIC1.95□□□□□ -2.1
CCDC65Q8IXS2 AL356432.1-201ENST00000405809 419 ntBASIC1.95□□□□□ -2.1
CCDC65Q8IXS2 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC1.95□□□□□ -2.1
CCDC65Q8IXS2 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.95□□□□□ -2.1
CCDC65Q8IXS2 RPL7P54-201ENST00000438336 674 ntBASIC1.95□□□□□ -2.1
CCDC65Q8IXS2 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.95□□□□□ -2.1
CCDC65Q8IXS2 RPL21P99-201ENST00000480369 423 ntBASIC1.95□□□□□ -2.1
CCDC65Q8IXS2 AC140059.1-201ENST00000489238 361 ntBASIC1.95□□□□□ -2.1
CCDC65Q8IXS2 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC1.95□□□□□ -2.1
CCDC65Q8IXS2 RNU6-685P-201ENST00000517088 95 ntBASIC1.95□□□□□ -2.1
CCDC65Q8IXS2 AC060788.1-201ENST00000521318 469 ntBASIC1.95□□□□□ -2.1
CCDC65Q8IXS2 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC1.95□□□□□ -2.1
CCDC65Q8IXS2 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
CCDC65Q8IXS2 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC1.95□□□□□ -2.1
CCDC65Q8IXS2 CR383656.8-201ENST00000549046 145 ntBASIC1.95□□□□□ -2.1
CCDC65Q8IXS2 AC233702.2-202ENST00000562547 291 ntBASIC1.95□□□□□ -2.1
CCDC65Q8IXS2 AC024614.2-201ENST00000577584 372 ntBASIC1.95□□□□□ -2.1
CCDC65Q8IXS2 AC090578.1-201ENST00000604955 591 ntBASIC1.95□□□□□ -2.1
CCDC65Q8IXS2 AC068276.1-201ENST00000605793 379 ntBASIC1.95□□□□□ -2.1
CCDC65Q8IXS2 ZNF702P-202ENST00000434269 1966 ntBASIC1.95□□□□□ -2.1
CCDC65Q8IXS2 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
CCDC65Q8IXS2 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
CCDC65Q8IXS2 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.94□□□□□ -2.1
CCDC65Q8IXS2 AC138393.1-203ENST00000327086 343 ntBASIC1.94□□□□□ -2.1
CCDC65Q8IXS2 RNU6-1159P-201ENST00000362933 107 ntBASIC1.94□□□□□ -2.1
CCDC65Q8IXS2 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
CCDC65Q8IXS2 RNU6-641P-201ENST00000384006 107 ntBASIC1.94□□□□□ -2.1
CCDC65Q8IXS2 MIR10A-201ENST00000385043 110 ntBASIC1.94□□□□□ -2.1
CCDC65Q8IXS2 U8.13-201ENST00000390842 128 ntBASIC1.94□□□□□ -2.1
CCDC65Q8IXS2 AL591034.2-201ENST00000402839 359 ntBASIC1.94□□□□□ -2.1
CCDC65Q8IXS2 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC1.94□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 143.8 ms