Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
TRIM48Q8IWZ4 IPO8P1-201ENST00000455509 3109 ntBASIC3.72□□□□□ -1.81
TRIM48Q8IWZ4 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
TRIM48Q8IWZ4 Y_RNA.350-201ENST00000365409 98 ntBASIC3.72□□□□□ -1.81
TRIM48Q8IWZ4 RNU1-73P-201ENST00000383971 164 ntBASIC3.72□□□□□ -1.81
TRIM48Q8IWZ4 MIR518D-201ENST00000385014 87 ntBASIC3.72□□□□□ -1.81
TRIM48Q8IWZ4 MIR199A2-201ENST00000385289 110 ntBASIC3.72□□□□□ -1.81
TRIM48Q8IWZ4 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.72□□□□□ -1.81
TRIM48Q8IWZ4 CRYBB2P1-203ENST00000415709 538 ntBASIC3.72□□□□□ -1.81
TRIM48Q8IWZ4 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
TRIM48Q8IWZ4 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.72□□□□□ -1.81
TRIM48Q8IWZ4 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.72□□□□□ -1.81
TRIM48Q8IWZ4 RNU7-175P-201ENST00000515915 61 ntBASIC3.72□□□□□ -1.81
TRIM48Q8IWZ4 RNU6-1282P-201ENST00000516735 96 ntBASIC3.72□□□□□ -1.81
TRIM48Q8IWZ4 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC3.72□□□□□ -1.81
TRIM48Q8IWZ4 MIR3158-1-201ENST00000583596 81 ntBASIC3.72□□□□□ -1.81
TRIM48Q8IWZ4 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.72□□□□□ -1.81
TRIM48Q8IWZ4 AC004825.2-201ENST00000616634 455 ntBASIC3.72□□□□□ -1.81
TRIM48Q8IWZ4 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.72□□□□□ -1.81
TRIM48Q8IWZ4 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.72□□□□□ -1.81
TRIM48Q8IWZ4 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
TRIM48Q8IWZ4 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
TRIM48Q8IWZ4 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
TRIM48Q8IWZ4 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
TRIM48Q8IWZ4 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
TRIM48Q8IWZ4 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
TRIM48Q8IWZ4 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.72□□□□□ -1.81
TRIM48Q8IWZ4 MTND5P6-201ENST00000422338 1798 ntBASIC3.71□□□□□ -1.81
TRIM48Q8IWZ4 Y_RNA.14-201ENST00000362415 103 ntBASIC3.71□□□□□ -1.82
TRIM48Q8IWZ4 SNORA31-201ENST00000362607 130 ntBASIC3.71□□□□□ -1.82
TRIM48Q8IWZ4 Y_RNA.60-201ENST00000362831 98 ntBASIC3.71□□□□□ -1.82
TRIM48Q8IWZ4 RNU1-76P-201ENST00000362903 159 ntBASIC3.71□□□□□ -1.82
TRIM48Q8IWZ4 RNU6-942P-201ENST00000363002 107 ntBASIC3.71□□□□□ -1.82
TRIM48Q8IWZ4 Y_RNA.458-201ENST00000384240 102 ntBASIC3.71□□□□□ -1.82
TRIM48Q8IWZ4 RPL21P75-201ENST00000396599 483 ntBASIC3.71□□□□□ -1.82
TRIM48Q8IWZ4 RPL21P28-201ENST00000401418 483 ntBASIC3.71□□□□□ -1.82
TRIM48Q8IWZ4 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.71□□□□□ -1.82
TRIM48Q8IWZ4 RNA5SP44-201ENST00000410446 133 ntBASIC3.71□□□□□ -1.82
TRIM48Q8IWZ4 AP000275.1-201ENST00000411943 390 ntBASIC3.71□□□□□ -1.82
TRIM48Q8IWZ4 AC009310.1-201ENST00000414414 451 ntBASIC3.71□□□□□ -1.82
TRIM48Q8IWZ4 AL590556.1-201ENST00000423231 483 ntBASIC3.71□□□□□ -1.82
TRIM48Q8IWZ4 HMGN2P30-201ENST00000423237 256 ntBASIC3.71□□□□□ -1.82
TRIM48Q8IWZ4 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.71□□□□□ -1.82
TRIM48Q8IWZ4 CYCSP32-201ENST00000440548 321 ntBASIC3.71□□□□□ -1.82
TRIM48Q8IWZ4 AL500522.2-201ENST00000448562 343 ntBASIC3.71□□□□□ -1.82
TRIM48Q8IWZ4 RPL21P39-201ENST00000463605 483 ntBASIC3.71□□□□□ -1.82
TRIM48Q8IWZ4 S100A11P1-201ENST00000477525 312 ntBASIC3.71□□□□□ -1.82
TRIM48Q8IWZ4 AC087190.1-201ENST00000484462 480 ntBASIC3.71□□□□□ -1.82
TRIM48Q8IWZ4 AC107032.1-201ENST00000485945 480 ntBASIC3.71□□□□□ -1.82
TRIM48Q8IWZ4 AC132942.1-201ENST00000486753 483 ntBASIC3.71□□□□□ -1.82
TRIM48Q8IWZ4 RPS29P20-201ENST00000489592 171 ntBASIC3.71□□□□□ -1.82
TRIM48Q8IWZ4 AC093591.1-201ENST00000491435 481 ntBASIC3.71□□□□□ -1.82
TRIM48Q8IWZ4 RPL21P16-201ENST00000495531 483 ntBASIC3.71□□□□□ -1.82
TRIM48Q8IWZ4 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC3.71□□□□□ -1.82
TRIM48Q8IWZ4 RNA5SP468-201ENST00000516782 93 ntBASIC3.71□□□□□ -1.82
TRIM48Q8IWZ4 RNU6-928P-201ENST00000516876 104 ntBASIC3.71□□□□□ -1.82
TRIM48Q8IWZ4 Y_RNA.706-201ENST00000516933 99 ntBASIC3.71□□□□□ -1.82
TRIM48Q8IWZ4 AP004607.1-201ENST00000524456 203 ntBASIC3.71□□□□□ -1.82
TRIM48Q8IWZ4 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.71□□□□□ -1.82
TRIM48Q8IWZ4 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC3.71□□□□□ -1.82
TRIM48Q8IWZ4 AC104581.2-201ENST00000572227 430 ntBASIC3.71□□□□□ -1.82
TRIM48Q8IWZ4 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC3.71□□□□□ -1.82
TRIM48Q8IWZ4 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.71□□□□□ -1.82
TRIM48Q8IWZ4 AC024153.1-201ENST00000603103 365 ntBASIC3.71□□□□□ -1.82
TRIM48Q8IWZ4 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.71□□□□□ -1.82
TRIM48Q8IWZ4 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
TRIM48Q8IWZ4 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
TRIM48Q8IWZ4 AC233981.2-201ENST00000611524 1614 ntBASIC3.7□□□□□ -1.82
TRIM48Q8IWZ4 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
TRIM48Q8IWZ4 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
TRIM48Q8IWZ4 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.7□□□□□ -1.82
TRIM48Q8IWZ4 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.7□□□□□ -1.82
TRIM48Q8IWZ4 Y_RNA.183-201ENST00000363882 113 ntBASIC3.7□□□□□ -1.82
TRIM48Q8IWZ4 RNU6-611P-201ENST00000384276 104 ntBASIC3.7□□□□□ -1.82
TRIM48Q8IWZ4 MTCYBP2-201ENST00000407745 171 ntBASIC3.7□□□□□ -1.82
TRIM48Q8IWZ4 Z98941.1-201ENST00000407764 100 ntBASIC3.7□□□□□ -1.82
TRIM48Q8IWZ4 AL591043.1-201ENST00000432461 424 ntBASIC3.7□□□□□ -1.82
TRIM48Q8IWZ4 AL031659.1-201ENST00000447075 539 ntBASIC3.7□□□□□ -1.82
TRIM48Q8IWZ4 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC3.7□□□□□ -1.82
TRIM48Q8IWZ4 MTATP6P7-201ENST00000453315 681 ntBASIC3.7□□□□□ -1.82
TRIM48Q8IWZ4 AL645939.1-201ENST00000453429 797 ntBASIC3.7□□□□□ -1.82
TRIM48Q8IWZ4 RPL23AP14-201ENST00000468281 468 ntBASIC3.7□□□□□ -1.82
TRIM48Q8IWZ4 HMGB1P35-201ENST00000503360 598 ntBASIC3.7□□□□□ -1.82
TRIM48Q8IWZ4 AC091874.1-201ENST00000511402 339 ntBASIC3.7□□□□□ -1.82
TRIM48Q8IWZ4 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.7□□□□□ -1.82
TRIM48Q8IWZ4 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.7□□□□□ -1.82
TRIM48Q8IWZ4 AP004242.1-201ENST00000533701 349 ntBASIC3.7□□□□□ -1.82
TRIM48Q8IWZ4 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.7□□□□□ -1.82
TRIM48Q8IWZ4 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.7□□□□□ -1.82
TRIM48Q8IWZ4 AC010928.2-201ENST00000588017 287 ntBASIC3.7□□□□□ -1.82
TRIM48Q8IWZ4 RPL23AP78-201ENST00000599928 470 ntBASIC3.7□□□□□ -1.82
TRIM48Q8IWZ4 MIR92B-201ENST00000607575 96 ntBASIC3.7□□□□□ -1.82
TRIM48Q8IWZ4 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC3.7□□□□□ -1.82
TRIM48Q8IWZ4 AL121772.2-201ENST00000614331 297 ntBASIC3.7□□□□□ -1.82
TRIM48Q8IWZ4 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.7□□□□□ -1.82
TRIM48Q8IWZ4 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.7□□□□□ -1.82
TRIM48Q8IWZ4 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
TRIM48Q8IWZ4 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.7□□□□□ -1.82
TRIM48Q8IWZ4 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
TRIM48Q8IWZ4 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 137.3 ms