Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
CCDC60Q8IWA6 SNORD14B-201ENST00000364533 90 ntBASIC2.52□□□□□ -2.01
CCDC60Q8IWA6 RNU6-1280P-201ENST00000365211 107 ntBASIC2.52□□□□□ -2.01
CCDC60Q8IWA6 RNU6-517P-201ENST00000384362 110 ntBASIC2.52□□□□□ -2.01
CCDC60Q8IWA6 RNU6-45P-201ENST00000384471 107 ntBASIC2.52□□□□□ -2.01
CCDC60Q8IWA6 MIR221-201ENST00000385135 110 ntBASIC2.52□□□□□ -2.01
CCDC60Q8IWA6 SNORD37.1-201ENST00000390968 65 ntBASIC2.52□□□□□ -2.01
CCDC60Q8IWA6 RNU6-780P-201ENST00000391030 104 ntBASIC2.52□□□□□ -2.01
CCDC60Q8IWA6 RNU6-903P-201ENST00000391270 109 ntBASIC2.52□□□□□ -2.01
CCDC60Q8IWA6 AL513475.1-201ENST00000406602 315 ntBASIC2.52□□□□□ -2.01
CCDC60Q8IWA6 AC096649.2-201ENST00000416186 393 ntBASIC2.52□□□□□ -2.01
CCDC60Q8IWA6 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC2.52□□□□□ -2.01
CCDC60Q8IWA6 CR769767.1-201ENST00000436337 346 ntBASIC2.52□□□□□ -2.01
CCDC60Q8IWA6 AL353705.4-201ENST00000449661 238 ntBASIC2.52□□□□□ -2.01
CCDC60Q8IWA6 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC2.52□□□□□ -2.01
CCDC60Q8IWA6 FDX1P2-201ENST00000450769 375 ntBASIC2.52□□□□□ -2.01
CCDC60Q8IWA6 SNRPFP3-201ENST00000457792 225 ntBASIC2.52□□□□□ -2.01
CCDC60Q8IWA6 GMFBP1-201ENST00000467831 427 ntBASIC2.52□□□□□ -2.01
CCDC60Q8IWA6 AL163973.1-201ENST00000484753 577 ntBASIC2.52□□□□□ -2.01
CCDC60Q8IWA6 AC026801.1-201ENST00000497178 464 ntBASIC2.52□□□□□ -2.01
CCDC60Q8IWA6 MTCO3P9-201ENST00000506989 781 ntBASIC2.52□□□□□ -2.01
CCDC60Q8IWA6 MTND3P25-201ENST00000509243 135 ntBASIC2.52□□□□□ -2.01
CCDC60Q8IWA6 AC009646.1-201ENST00000510455 318 ntBASIC2.52□□□□□ -2.01
CCDC60Q8IWA6 AC016957.1-201ENST00000534895 309 ntBASIC2.52□□□□□ -2.01
CCDC60Q8IWA6 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.52□□□□□ -2.01
CCDC60Q8IWA6 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC2.52□□□□□ -2.01
CCDC60Q8IWA6 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.52□□□□□ -2.01
CCDC60Q8IWA6 AC026464.5-201ENST00000562497 722 ntBASIC2.52□□□□□ -2.01
CCDC60Q8IWA6 AC092325.1-201ENST00000566449 554 ntBASIC2.52□□□□□ -2.01
CCDC60Q8IWA6 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC2.52□□□□□ -2.01
CCDC60Q8IWA6 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC2.52□□□□□ -2.01
CCDC60Q8IWA6 AF250324.2-201ENST00000608299 610 ntBASIC2.52□□□□□ -2.01
CCDC60Q8IWA6 MIR6134-201ENST00000617606 109 ntBASIC2.52□□□□□ -2.01
CCDC60Q8IWA6 USP12-203ENST00000620323 349 ntTSL 3 BASIC2.52□□□□□ -2.01
CCDC60Q8IWA6 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.52□□□□□ -2.01
CCDC60Q8IWA6 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.51□□□□□ -2.01
CCDC60Q8IWA6 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
CCDC60Q8IWA6 PGBD4P6-201ENST00000421501 610 ntBASIC2.51□□□□□ -2.01
CCDC60Q8IWA6 AL627311.1-201ENST00000431514 115 ntBASIC2.51□□□□□ -2.01
CCDC60Q8IWA6 AC096638.1-201ENST00000444678 216 ntBASIC2.51□□□□□ -2.01
CCDC60Q8IWA6 AC073415.1-201ENST00000449240 153 ntBASIC2.51□□□□□ -2.01
CCDC60Q8IWA6 HMGB1P30-201ENST00000492455 606 ntBASIC2.51□□□□□ -2.01
CCDC60Q8IWA6 GZMAP1-201ENST00000503054 631 ntBASIC2.51□□□□□ -2.01
CCDC60Q8IWA6 RNU1-86P-201ENST00000516108 154 ntBASIC2.51□□□□□ -2.01
CCDC60Q8IWA6 SCARNA17.1-201ENST00000516211 143 ntBASIC2.51□□□□□ -2.01
CCDC60Q8IWA6 SCARNA17.2-201ENST00000516334 143 ntBASIC2.51□□□□□ -2.01
CCDC60Q8IWA6 RNU1-107P-201ENST00000516617 154 ntBASIC2.51□□□□□ -2.01
CCDC60Q8IWA6 Y_RNA.704-201ENST00000516851 102 ntBASIC2.51□□□□□ -2.01
CCDC60Q8IWA6 SNORA31.18-201ENST00000517043 134 ntBASIC2.51□□□□□ -2.01
CCDC60Q8IWA6 RNA5SP402-201ENST00000517148 110 ntBASIC2.51□□□□□ -2.01
CCDC60Q8IWA6 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.51□□□□□ -2.01
CCDC60Q8IWA6 AC104383.1-201ENST00000530297 370 ntBASIC2.51□□□□□ -2.01
CCDC60Q8IWA6 SNRPGP18-201ENST00000553000 214 ntBASIC2.51□□□□□ -2.01
CCDC60Q8IWA6 HIF1AP1-201ENST00000553642 175 ntBASIC2.51□□□□□ -2.01
CCDC60Q8IWA6 AL512360.1-201ENST00000555346 234 ntBASIC2.51□□□□□ -2.01
CCDC60Q8IWA6 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC2.51□□□□□ -2.01
CCDC60Q8IWA6 AC007151.1-201ENST00000572774 483 ntBASIC2.51□□□□□ -2.01
CCDC60Q8IWA6 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.51□□□□□ -2.01
CCDC60Q8IWA6 MIR5583-1-201ENST00000580941 59 ntBASIC2.51□□□□□ -2.01
CCDC60Q8IWA6 MIR5194-201ENST00000582634 120 ntBASIC2.51□□□□□ -2.01
CCDC60Q8IWA6 AP001330.5-201ENST00000607176 411 ntBASIC2.51□□□□□ -2.01
CCDC60Q8IWA6 AC092954.2-201ENST00000609103 430 ntBASIC2.51□□□□□ -2.01
CCDC60Q8IWA6 AC011890.2-201ENST00000613393 294 ntBASIC2.51□□□□□ -2.01
CCDC60Q8IWA6 SCARNA17.4-201ENST00000614296 143 ntBASIC2.51□□□□□ -2.01
CCDC60Q8IWA6 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC2.51□□□□□ -2.01
CCDC60Q8IWA6 AL354685.2-201ENST00000448218 1447 ntBASIC2.51□□□□□ -2.01
CCDC60Q8IWA6 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
CCDC60Q8IWA6 RNU6-1322P-201ENST00000364309 107 ntBASIC2.5□□□□□ -2.01
CCDC60Q8IWA6 Y_RNA.255-201ENST00000364581 97 ntBASIC2.5□□□□□ -2.01
CCDC60Q8IWA6 RNU6-19P-201ENST00000384718 107 ntBASIC2.5□□□□□ -2.01
CCDC60Q8IWA6 MIR147B-201ENST00000390185 80 ntBASIC2.5□□□□□ -2.01
CCDC60Q8IWA6 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC2.5□□□□□ -2.01
CCDC60Q8IWA6 DPH3P2-201ENST00000422618 250 ntBASIC2.5□□□□□ -2.01
CCDC60Q8IWA6 AC016691.1-201ENST00000441321 413 ntBASIC2.5□□□□□ -2.01
CCDC60Q8IWA6 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC2.5□□□□□ -2.01
CCDC60Q8IWA6 AL513124.1-201ENST00000450410 614 ntBASIC2.5□□□□□ -2.01
CCDC60Q8IWA6 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC2.5□□□□□ -2.01
CCDC60Q8IWA6 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC2.5□□□□□ -2.01
CCDC60Q8IWA6 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC2.5□□□□□ -2.01
CCDC60Q8IWA6 SCARNA18-201ENST00000459004 134 ntBASIC2.5□□□□□ -2.01
CCDC60Q8IWA6 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC2.5□□□□□ -2.01
CCDC60Q8IWA6 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.5□□□□□ -2.01
CCDC60Q8IWA6 AC116655.1-201ENST00000508324 901 ntBASIC2.5□□□□□ -2.01
CCDC60Q8IWA6 SNORA40.12-201ENST00000516329 111 ntBASIC2.5□□□□□ -2.01
CCDC60Q8IWA6 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.5□□□□□ -2.01
CCDC60Q8IWA6 MIR4648-201ENST00000580107 72 ntBASIC2.5□□□□□ -2.01
CCDC60Q8IWA6 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.5□□□□□ -2.01
CCDC60Q8IWA6 AC091152.3-201ENST00000604227 325 ntBASIC2.5□□□□□ -2.01
CCDC60Q8IWA6 AL137847.3-201ENST00000611521 109 ntBASIC2.5□□□□□ -2.01
CCDC60Q8IWA6 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC2.5□□□□□ -2.01
CCDC60Q8IWA6 CDC27P3-201ENST00000635418 1910 ntBASIC2.5□□□□□ -2.01
CCDC60Q8IWA6 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
CCDC60Q8IWA6 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.49□□□□□ -2.01
CCDC60Q8IWA6 RNU6-1303P-201ENST00000364841 107 ntBASIC2.49□□□□□ -2.01
CCDC60Q8IWA6 RNU6-384P-201ENST00000364900 104 ntBASIC2.49□□□□□ -2.01
CCDC60Q8IWA6 Y_RNA.481-201ENST00000384373 102 ntBASIC2.49□□□□□ -2.01
CCDC60Q8IWA6 RNU6-1215P-201ENST00000384441 102 ntBASIC2.49□□□□□ -2.01
CCDC60Q8IWA6 RNU6-393P-201ENST00000384475 107 ntBASIC2.49□□□□□ -2.01
CCDC60Q8IWA6 Y_RNA.516-201ENST00000384541 124 ntBASIC2.49□□□□□ -2.01
CCDC60Q8IWA6 RNU6-1127P-201ENST00000384580 107 ntBASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 143.2 ms