Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 VWA8P1-201ENST00000510889 176 ntBASIC4.43□□□□□ -1.7
NPAS4Q8IUM7 SNORA70.14-201ENST00000516205 110 ntBASIC4.43□□□□□ -1.7
NPAS4Q8IUM7 AC060766.3-201ENST00000591442 263 ntBASIC4.43□□□□□ -1.7
NPAS4Q8IUM7 RPL23AP78-201ENST00000599928 470 ntBASIC4.43□□□□□ -1.7
NPAS4Q8IUM7 DLEU2_2.2-201ENST00000615474 90 ntBASIC4.43□□□□□ -1.7
NPAS4Q8IUM7 AP001282.2-201ENST00000616149 309 ntBASIC4.43□□□□□ -1.7
NPAS4Q8IUM7 AC005086.4-201ENST00000623065 213 ntBASIC4.43□□□□□ -1.7
NPAS4Q8IUM7 AC012442.3-202ENST00000636742 206 ntBASIC4.43□□□□□ -1.7
NPAS4Q8IUM7 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
NPAS4Q8IUM7 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
NPAS4Q8IUM7 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
NPAS4Q8IUM7 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
NPAS4Q8IUM7 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
NPAS4Q8IUM7 RNU6-280P-201ENST00000364145 104 ntBASIC4.42□□□□□ -1.7
NPAS4Q8IUM7 Y_RNA.274-201ENST00000364714 101 ntBASIC4.42□□□□□ -1.7
NPAS4Q8IUM7 RNU6-611P-201ENST00000384276 104 ntBASIC4.42□□□□□ -1.7
NPAS4Q8IUM7 RNU6-748P-201ENST00000384648 107 ntBASIC4.42□□□□□ -1.7
NPAS4Q8IUM7 MIR215-201ENST00000384858 110 ntBASIC4.42□□□□□ -1.7
NPAS4Q8IUM7 RNA5SP372-201ENST00000390836 115 ntBASIC4.42□□□□□ -1.7
NPAS4Q8IUM7 SNORA12.2-201ENST00000391040 156 ntBASIC4.42□□□□□ -1.7
NPAS4Q8IUM7 MIR548H3-201ENST00000408771 118 ntBASIC4.42□□□□□ -1.7
NPAS4Q8IUM7 RNA5SP390-201ENST00000410191 113 ntBASIC4.42□□□□□ -1.7
NPAS4Q8IUM7 RNA5SP494-201ENST00000410653 129 ntBASIC4.42□□□□□ -1.7
NPAS4Q8IUM7 MTATP6P29-201ENST00000415057 132 ntBASIC4.42□□□□□ -1.7
NPAS4Q8IUM7 AC096649.2-201ENST00000416186 393 ntBASIC4.42□□□□□ -1.7
NPAS4Q8IUM7 GOT2P5-201ENST00000433995 546 ntBASIC4.42□□□□□ -1.7
NPAS4Q8IUM7 SETP5-201ENST00000437270 562 ntBASIC4.42□□□□□ -1.7
NPAS4Q8IUM7 AC004383.1-201ENST00000438135 289 ntBASIC4.42□□□□□ -1.7
NPAS4Q8IUM7 RNA5SP103-201ENST00000459503 118 ntBASIC4.42□□□□□ -1.7
NPAS4Q8IUM7 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC4.42□□□□□ -1.7
NPAS4Q8IUM7 AC016632.1-201ENST00000503994 196 ntBASIC4.42□□□□□ -1.7
NPAS4Q8IUM7 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC4.42□□□□□ -1.7
NPAS4Q8IUM7 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC4.42□□□□□ -1.7
NPAS4Q8IUM7 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC4.42□□□□□ -1.7
NPAS4Q8IUM7 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC4.42□□□□□ -1.7
NPAS4Q8IUM7 MIR6868-201ENST00000611215 58 ntBASIC4.42□□□□□ -1.7
NPAS4Q8IUM7 AC004792.1-201ENST00000614523 137 ntBASIC4.42□□□□□ -1.7
NPAS4Q8IUM7 AL138721.1-201ENST00000616756 179 ntBASIC4.42□□□□□ -1.7
NPAS4Q8IUM7 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
NPAS4Q8IUM7 AC140113.4-201ENST00000622087 222 ntBASIC4.42□□□□□ -1.7
NPAS4Q8IUM7 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.42□□□□□ -1.7
NPAS4Q8IUM7 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.42□□□□□ -1.7
NPAS4Q8IUM7 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
NPAS4Q8IUM7 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.42□□□□□ -1.7
NPAS4Q8IUM7 UBE3AP2-201ENST00000429033 2259 ntBASIC4.42□□□□□ -1.7
NPAS4Q8IUM7 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
NPAS4Q8IUM7 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.42□□□□□ -1.7
NPAS4Q8IUM7 AL353743.1-202ENST00000431724 1695 ntBASIC4.41□□□□□ -1.7
NPAS4Q8IUM7 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
NPAS4Q8IUM7 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
NPAS4Q8IUM7 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.41□□□□□ -1.7
NPAS4Q8IUM7 Z82217.1-201ENST00000625157 8149 ntBASIC4.41□□□□□ -1.7
NPAS4Q8IUM7 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
NPAS4Q8IUM7 Y_RNA.65-201ENST00000362846 100 ntBASIC4.41□□□□□ -1.7
NPAS4Q8IUM7 Y_RNA.84-201ENST00000363011 104 ntBASIC4.41□□□□□ -1.7
NPAS4Q8IUM7 Y_RNA.183-201ENST00000363882 113 ntBASIC4.41□□□□□ -1.7
NPAS4Q8IUM7 Y_RNA.270-201ENST00000364693 104 ntBASIC4.41□□□□□ -1.7
NPAS4Q8IUM7 SNORA70.4-201ENST00000365509 134 ntBASIC4.41□□□□□ -1.7
NPAS4Q8IUM7 RNU6-1286P-201ENST00000383871 107 ntBASIC4.41□□□□□ -1.7
NPAS4Q8IUM7 MIR544A-201ENST00000384855 91 ntBASIC4.41□□□□□ -1.7
NPAS4Q8IUM7 SNORD96B-201ENST00000386148 79 ntBASIC4.41□□□□□ -1.7
NPAS4Q8IUM7 RNU6-1203P-201ENST00000410703 110 ntBASIC4.41□□□□□ -1.7
NPAS4Q8IUM7 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC4.41□□□□□ -1.7
NPAS4Q8IUM7 RPEP5-201ENST00000441137 268 ntBASIC4.41□□□□□ -1.7
NPAS4Q8IUM7 AC007969.2-201ENST00000441891 191 ntBASIC4.41□□□□□ -1.7
NPAS4Q8IUM7 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC4.41□□□□□ -1.7
NPAS4Q8IUM7 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC4.41□□□□□ -1.7
NPAS4Q8IUM7 RPL29P14-201ENST00000495837 428 ntBASIC4.41□□□□□ -1.7
NPAS4Q8IUM7 AKIRIN2P1-201ENST00000505898 352 ntBASIC4.41□□□□□ -1.7
NPAS4Q8IUM7 Y_RNA.700-201ENST00000516806 100 ntBASIC4.41□□□□□ -1.7
NPAS4Q8IUM7 SNORA31.21-201ENST00000517180 77 ntBASIC4.41□□□□□ -1.7
NPAS4Q8IUM7 AC034114.1-201ENST00000520293 285 ntBASIC4.41□□□□□ -1.7
NPAS4Q8IUM7 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.41□□□□□ -1.7
NPAS4Q8IUM7 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC4.41□□□□□ -1.7
NPAS4Q8IUM7 AL355877.2-201ENST00000603670 358 ntBASIC4.41□□□□□ -1.7
NPAS4Q8IUM7 SCARNA4-201ENST00000629045 128 ntBASIC4.41□□□□□ -1.7
NPAS4Q8IUM7 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.41□□□□□ -1.7
NPAS4Q8IUM7 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
NPAS4Q8IUM7 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
NPAS4Q8IUM7 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
NPAS4Q8IUM7 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.4□□□□□ -1.7
NPAS4Q8IUM7 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.7
NPAS4Q8IUM7 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
NPAS4Q8IUM7 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.7
NPAS4Q8IUM7 Y_RNA.29-201ENST00000362570 113 ntBASIC4.4□□□□□ -1.71
NPAS4Q8IUM7 RNA5SP124-201ENST00000362739 110 ntBASIC4.4□□□□□ -1.71
NPAS4Q8IUM7 Y_RNA.237-201ENST00000364439 102 ntBASIC4.4□□□□□ -1.71
NPAS4Q8IUM7 RNU6-1141P-201ENST00000364520 107 ntBASIC4.4□□□□□ -1.71
NPAS4Q8IUM7 Y_RNA.297-201ENST00000364950 91 ntBASIC4.4□□□□□ -1.71
NPAS4Q8IUM7 MIR190B-201ENST00000401119 79 ntBASIC4.4□□□□□ -1.71
NPAS4Q8IUM7 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.4□□□□□ -1.71
NPAS4Q8IUM7 snoU13.30-201ENST00000458951 104 ntBASIC4.4□□□□□ -1.71
NPAS4Q8IUM7 SNRPGP7-201ENST00000469016 106 ntBASIC4.4□□□□□ -1.71
NPAS4Q8IUM7 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC4.4□□□□□ -1.71
NPAS4Q8IUM7 MIR2355-201ENST00000517199 87 ntBASIC4.4□□□□□ -1.71
NPAS4Q8IUM7 SNORA31.23-201ENST00000517219 133 ntBASIC4.4□□□□□ -1.71
NPAS4Q8IUM7 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.4□□□□□ -1.71
NPAS4Q8IUM7 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.4□□□□□ -1.71
NPAS4Q8IUM7 MTND6P33-201ENST00000571794 183 ntBASIC4.4□□□□□ -1.71
NPAS4Q8IUM7 AC025627.2-201ENST00000576220 160 ntBASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms