Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 Y_RNA.121-201ENST00000363309 113 ntBASIC3.87□□□□□ -1.79
ATG4DQ86TL0 RNA5SP197-201ENST00000363357 119 ntBASIC3.87□□□□□ -1.79
ATG4DQ86TL0 RNU6-898P-201ENST00000365627 104 ntBASIC3.87□□□□□ -1.79
ATG4DQ86TL0 SNORA40.19-201ENST00000390846 128 ntBASIC3.87□□□□□ -1.79
ATG4DQ86TL0 MIR1179-201ENST00000408703 91 ntBASIC3.87□□□□□ -1.79
ATG4DQ86TL0 RNA5SP44-201ENST00000410446 133 ntBASIC3.87□□□□□ -1.79
ATG4DQ86TL0 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC3.87□□□□□ -1.79
ATG4DQ86TL0 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC3.87□□□□□ -1.79
ATG4DQ86TL0 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.87□□□□□ -1.79
ATG4DQ86TL0 AC005042.3-201ENST00000453230 174 ntBASIC3.87□□□□□ -1.79
ATG4DQ86TL0 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC3.87□□□□□ -1.79
ATG4DQ86TL0 AL592156.1-201ENST00000508758 304 ntBASIC3.87□□□□□ -1.79
ATG4DQ86TL0 Y_RNA.797-201ENST00000515977 94 ntBASIC3.87□□□□□ -1.79
ATG4DQ86TL0 RNU6-572P-201ENST00000516724 80 ntBASIC3.87□□□□□ -1.79
ATG4DQ86TL0 RNA5SP73-201ENST00000516744 108 ntBASIC3.87□□□□□ -1.79
ATG4DQ86TL0 IFITM8P-201ENST00000522529 394 ntBASIC3.87□□□□□ -1.79
ATG4DQ86TL0 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
ATG4DQ86TL0 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.87□□□□□ -1.79
ATG4DQ86TL0 AC136624.4-201ENST00000573044 370 ntBASIC3.87□□□□□ -1.79
ATG4DQ86TL0 AC022441.3-201ENST00000605737 136 ntBASIC3.87□□□□□ -1.79
ATG4DQ86TL0 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.87□□□□□ -1.79
ATG4DQ86TL0 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
ATG4DQ86TL0 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC3.87□□□□□ -1.79
ATG4DQ86TL0 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
ATG4DQ86TL0 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC3.87□□□□□ -1.79
ATG4DQ86TL0 GHR-213ENST00000622294 4312 ntTSL 5 BASIC3.87□□□□□ -1.79
ATG4DQ86TL0 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
ATG4DQ86TL0 AC116096.1-201ENST00000566804 2314 ntBASIC3.87□□□□□ -1.79
ATG4DQ86TL0 AC110491.1-201ENST00000562191 2010 ntBASIC3.87□□□□□ -1.79
ATG4DQ86TL0 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC3.87□□□□□ -1.79
ATG4DQ86TL0 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
ATG4DQ86TL0 ANKRD30BP1-201ENST00000451052 2186 ntBASIC3.86□□□□□ -1.79
ATG4DQ86TL0 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC3.86□□□□□ -1.79
ATG4DQ86TL0 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC3.86□□□□□ -1.79
ATG4DQ86TL0 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
ATG4DQ86TL0 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
ATG4DQ86TL0 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
ATG4DQ86TL0 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
ATG4DQ86TL0 RNU6-105P-201ENST00000363909 104 ntBASIC3.86□□□□□ -1.79
ATG4DQ86TL0 RNU6-275P-201ENST00000364910 107 ntBASIC3.86□□□□□ -1.79
ATG4DQ86TL0 Y_RNA.319-201ENST00000365138 92 ntBASIC3.86□□□□□ -1.79
ATG4DQ86TL0 MIR539-201ENST00000365690 78 ntBASIC3.86□□□□□ -1.79
ATG4DQ86TL0 Y_RNA.420-201ENST00000384043 110 ntBASIC3.86□□□□□ -1.79
ATG4DQ86TL0 MIR514A1-201ENST00000385133 98 ntBASIC3.86□□□□□ -1.79
ATG4DQ86TL0 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.86□□□□□ -1.79
ATG4DQ86TL0 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.86□□□□□ -1.79
ATG4DQ86TL0 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.86□□□□□ -1.79
ATG4DQ86TL0 AC016925.1-201ENST00000458303 298 ntBASIC3.86□□□□□ -1.79
ATG4DQ86TL0 AC092798.1-201ENST00000458542 409 ntBASIC3.86□□□□□ -1.79
ATG4DQ86TL0 RN7SL303P-201ENST00000469773 251 ntBASIC3.86□□□□□ -1.79
ATG4DQ86TL0 RN7SL691P-201ENST00000494487 301 ntBASIC3.86□□□□□ -1.79
ATG4DQ86TL0 RNA5SP165-201ENST00000517142 115 ntBASIC3.86□□□□□ -1.79
ATG4DQ86TL0 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC3.86□□□□□ -1.79
ATG4DQ86TL0 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC3.86□□□□□ -1.79
ATG4DQ86TL0 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC3.86□□□□□ -1.79
ATG4DQ86TL0 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
ATG4DQ86TL0 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
ATG4DQ86TL0 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
ATG4DQ86TL0 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
ATG4DQ86TL0 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
ATG4DQ86TL0 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
ATG4DQ86TL0 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
ATG4DQ86TL0 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC3.85□□□□□ -1.79
ATG4DQ86TL0 CUL1P1-201ENST00000509510 2425 ntBASIC3.85□□□□□ -1.79
ATG4DQ86TL0 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC3.85□□□□□ -1.79
ATG4DQ86TL0 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC3.85□□□□□ -1.79
ATG4DQ86TL0 AL365440.1-201ENST00000436135 2167 ntBASIC3.85□□□□□ -1.79
ATG4DQ86TL0 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
ATG4DQ86TL0 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
ATG4DQ86TL0 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.85□□□□□ -1.79
ATG4DQ86TL0 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
ATG4DQ86TL0 RNU6-834P-201ENST00000362367 110 ntBASIC3.85□□□□□ -1.79
ATG4DQ86TL0 RNU1-14P-201ENST00000362759 152 ntBASIC3.85□□□□□ -1.79
ATG4DQ86TL0 RNU6-1074P-201ENST00000383995 104 ntBASIC3.85□□□□□ -1.79
ATG4DQ86TL0 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
ATG4DQ86TL0 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.85□□□□□ -1.79
ATG4DQ86TL0 EBAG9P1-201ENST00000418955 543 ntBASIC3.85□□□□□ -1.79
ATG4DQ86TL0 RPL17P36-201ENST00000420302 549 ntBASIC3.85□□□□□ -1.79
ATG4DQ86TL0 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.85□□□□□ -1.79
ATG4DQ86TL0 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
ATG4DQ86TL0 AL590399.6-201ENST00000446396 307 ntBASIC3.85□□□□□ -1.79
ATG4DQ86TL0 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC3.85□□□□□ -1.79
ATG4DQ86TL0 EIF4A1P11-201ENST00000451239 222 ntBASIC3.85□□□□□ -1.79
ATG4DQ86TL0 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC3.85□□□□□ -1.79
ATG4DQ86TL0 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC3.85□□□□□ -1.79
ATG4DQ86TL0 RPL7AP28-201ENST00000464513 571 ntBASIC3.85□□□□□ -1.79
ATG4DQ86TL0 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC3.85□□□□□ -1.79
ATG4DQ86TL0 AC020593.1-201ENST00000507399 299 ntBASIC3.85□□□□□ -1.79
ATG4DQ86TL0 PARP4P3-201ENST00000510265 317 ntBASIC3.85□□□□□ -1.79
ATG4DQ86TL0 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC3.85□□□□□ -1.79
ATG4DQ86TL0 AC022616.8-201ENST00000533569 253 ntBASIC3.85□□□□□ -1.79
ATG4DQ86TL0 AC069240.1-201ENST00000548774 375 ntBASIC3.85□□□□□ -1.79
ATG4DQ86TL0 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC3.85□□□□□ -1.79
ATG4DQ86TL0 UBE2Q2P8-201ENST00000560644 102 ntBASIC3.85□□□□□ -1.79
ATG4DQ86TL0 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.85□□□□□ -1.79
ATG4DQ86TL0 MIR4679-2-201ENST00000578358 77 ntBASIC3.85□□□□□ -1.79
ATG4DQ86TL0 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC3.85□□□□□ -1.79
ATG4DQ86TL0 FAM27D1-201ENST00000612308 341 ntBASIC3.85□□□□□ -1.79
ATG4DQ86TL0 MIR6716-201ENST00000613413 80 ntBASIC3.85□□□□□ -1.79
ATG4DQ86TL0 U73479.1-201ENST00000618062 168 ntBASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 112.2 ms