Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 SNORA3.4-201ENST00000515969 96 ntBASIC0.25□□□□□ -2.37
CSMD3Q7Z407 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC0.25□□□□□ -2.37
CSMD3Q7Z407 AC093027.1-201ENST00000546698 429 ntBASIC0.25□□□□□ -2.37
CSMD3Q7Z407 AC022254.1-201ENST00000567857 235 ntBASIC0.25□□□□□ -2.37
CSMD3Q7Z407 BPTFP1-201ENST00000579209 492 ntBASIC0.25□□□□□ -2.37
CSMD3Q7Z407 MIR3937-201ENST00000580135 106 ntBASIC0.25□□□□□ -2.37
CSMD3Q7Z407 Z99571.1-201ENST00000636677 394 ntBASIC0.25□□□□□ -2.37
CSMD3Q7Z407 AL590396.4-201ENST00000636779 956 ntBASIC0.25□□□□□ -2.37
CSMD3Q7Z407 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC0.24□□□□□ -2.37
CSMD3Q7Z407 SNORA29-201ENST00000384183 140 ntBASIC0.24□□□□□ -2.37
CSMD3Q7Z407 LARP1BP2-201ENST00000486594 519 ntBASIC0.24□□□□□ -2.37
CSMD3Q7Z407 AC124293.1-201ENST00000530034 493 ntBASIC0.24□□□□□ -2.37
CSMD3Q7Z407 MRPS36P5-201ENST00000551909 298 ntBASIC0.24□□□□□ -2.37
CSMD3Q7Z407 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC0.24□□□□□ -2.37
CSMD3Q7Z407 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.24□□□□□ -2.37
CSMD3Q7Z407 AC027335.2-201ENST00000624030 375 ntBASIC0.24□□□□□ -2.37
CSMD3Q7Z407 FARSBP1-201ENST00000435808 1778 ntBASIC0.24□□□□□ -2.37
CSMD3Q7Z407 MTCYBP38-201ENST00000417160 1123 ntBASIC0.24□□□□□ -2.37
CSMD3Q7Z407 MTCO1P3-201ENST00000429327 192 ntBASIC0.24□□□□□ -2.37
CSMD3Q7Z407 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC0.24□□□□□ -2.37
CSMD3Q7Z407 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC0.24□□□□□ -2.37
CSMD3Q7Z407 AC067940.1-201ENST00000458411 300 ntBASIC0.24□□□□□ -2.37
CSMD3Q7Z407 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC0.24□□□□□ -2.37
CSMD3Q7Z407 RNA5SP67-201ENST00000516422 131 ntBASIC0.24□□□□□ -2.37
CSMD3Q7Z407 ROCK1P1-201ENST00000573767 549 ntBASIC0.24□□□□□ -2.37
CSMD3Q7Z407 MIR4493-201ENST00000584016 73 ntBASIC0.24□□□□□ -2.37
CSMD3Q7Z407 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC0.24□□□□□ -2.37
CSMD3Q7Z407 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC0.24□□□□□ -2.37
CSMD3Q7Z407 DLEU1_2.1-201ENST00000617920 342 ntBASIC0.24□□□□□ -2.37
CSMD3Q7Z407 AC073569.3-201ENST00000619055 682 ntBASIC0.24□□□□□ -2.37
CSMD3Q7Z407 AC013470.4-201ENST00000619978 986 ntBASIC0.24□□□□□ -2.37
CSMD3Q7Z407 Y_RNA.35-201ENST00000362601 101 ntBASIC0.24□□□□□ -2.37
CSMD3Q7Z407 RNU1-96P-201ENST00000364163 162 ntBASIC0.24□□□□□ -2.37
CSMD3Q7Z407 MTND5P8-201ENST00000449817 1083 ntBASIC0.24□□□□□ -2.37
CSMD3Q7Z407 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC0.24□□□□□ -2.37
CSMD3Q7Z407 AL353691.1-201ENST00000451332 387 ntBASIC0.24□□□□□ -2.37
CSMD3Q7Z407 ACA59.2-201ENST00000517061 156 ntBASIC0.24□□□□□ -2.37
CSMD3Q7Z407 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC0.24□□□□□ -2.37
CSMD3Q7Z407 CYP3A52P-201ENST00000563326 91 ntBASIC0.24□□□□□ -2.37
CSMD3Q7Z407 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC0.24□□□□□ -2.37
CSMD3Q7Z407 AL078604.3-201ENST00000615580 211 ntBASIC0.24□□□□□ -2.37
CSMD3Q7Z407 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC0.24□□□□□ -2.37
CSMD3Q7Z407 RNU6-414P-201ENST00000363705 104 ntBASIC0.23□□□□□ -2.37
CSMD3Q7Z407 RNU6-72P-201ENST00000384285 79 ntBASIC0.23□□□□□ -2.37
CSMD3Q7Z407 MIR153-2-201ENST00000385225 87 ntBASIC0.23□□□□□ -2.37
CSMD3Q7Z407 AL589655.1-201ENST00000405398 482 ntBASIC0.23□□□□□ -2.37
CSMD3Q7Z407 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC0.23□□□□□ -2.37
CSMD3Q7Z407 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC0.23□□□□□ -2.37
CSMD3Q7Z407 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.23□□□□□ -2.37
CSMD3Q7Z407 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC0.23□□□□□ -2.37
CSMD3Q7Z407 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC0.23□□□□□ -2.37
CSMD3Q7Z407 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC0.23□□□□□ -2.37
CSMD3Q7Z407 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC0.23□□□□□ -2.37
CSMD3Q7Z407 AC010460.2-201ENST00000509054 677 ntBASIC0.23□□□□□ -2.37
CSMD3Q7Z407 RNU7-40P-201ENST00000516397 64 ntBASIC0.23□□□□□ -2.37
CSMD3Q7Z407 RNU6-889P-201ENST00000517189 103 ntBASIC0.23□□□□□ -2.37
CSMD3Q7Z407 RNU6-840P-201ENST00000517275 65 ntBASIC0.23□□□□□ -2.37
CSMD3Q7Z407 AP003034.1-201ENST00000534621 422 ntBASIC0.23□□□□□ -2.37
CSMD3Q7Z407 MDM2-232ENST00000544561 213 ntTSL 5 BASIC0.23□□□□□ -2.37
CSMD3Q7Z407 AC004217.3-201ENST00000551552 878 ntBASIC0.23□□□□□ -2.37
CSMD3Q7Z407 NIFKP6-201ENST00000598115 845 ntBASIC0.23□□□□□ -2.37
CSMD3Q7Z407 AC068790.6-201ENST00000602558 258 ntBASIC0.23□□□□□ -2.37
CSMD3Q7Z407 AC097372.5-201ENST00000623665 376 ntBASIC0.23□□□□□ -2.37
CSMD3Q7Z407 ATM-228ENST00000639240 498 ntTSL 5 BASIC0.23□□□□□ -2.37
CSMD3Q7Z407 RNU6-338P-201ENST00000383888 105 ntBASIC0.23□□□□□ -2.37
CSMD3Q7Z407 RNU6-891P-201ENST00000384280 111 ntBASIC0.23□□□□□ -2.37
CSMD3Q7Z407 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC0.23□□□□□ -2.37
CSMD3Q7Z407 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC0.23□□□□□ -2.37
CSMD3Q7Z407 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.23□□□□□ -2.37
CSMD3Q7Z407 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC0.23□□□□□ -2.37
CSMD3Q7Z407 AC025465.3-201ENST00000510570 311 ntBASIC0.23□□□□□ -2.37
CSMD3Q7Z407 AC109329.1-201ENST00000518744 317 ntBASIC0.23□□□□□ -2.37
CSMD3Q7Z407 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC0.23□□□□□ -2.37
CSMD3Q7Z407 POC1B-211ENST00000549504 581 ntTSL 5 BASIC0.23□□□□□ -2.37
CSMD3Q7Z407 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.23□□□□□ -2.37
CSMD3Q7Z407 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC0.23□□□□□ -2.37
CSMD3Q7Z407 RNU6-923P-201ENST00000364753 107 ntBASIC0.23□□□□□ -2.37
CSMD3Q7Z407 RNU6-878P-201ENST00000384578 110 ntBASIC0.23□□□□□ -2.37
CSMD3Q7Z407 RNU6-1300P-201ENST00000391046 108 ntBASIC0.23□□□□□ -2.37
CSMD3Q7Z407 AL606490.4-201ENST00000423117 127 ntBASIC0.23□□□□□ -2.37
CSMD3Q7Z407 PPP1R11P2-201ENST00000423543 382 ntBASIC0.23□□□□□ -2.37
CSMD3Q7Z407 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC0.23□□□□□ -2.37
CSMD3Q7Z407 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC0.23□□□□□ -2.37
CSMD3Q7Z407 MEMO1P3-201ENST00000459811 302 ntBASIC0.23□□□□□ -2.37
CSMD3Q7Z407 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC0.23□□□□□ -2.37
CSMD3Q7Z407 AC006518.2-201ENST00000542513 940 ntBASIC0.23□□□□□ -2.37
CSMD3Q7Z407 CYB5AP5-201ENST00000549779 389 ntBASIC0.23□□□□□ -2.37
CSMD3Q7Z407 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC0.23□□□□□ -2.37
CSMD3Q7Z407 AC233702.2-202ENST00000562547 291 ntBASIC0.23□□□□□ -2.37
CSMD3Q7Z407 MIR5190-201ENST00000581537 80 ntBASIC0.23□□□□□ -2.37
CSMD3Q7Z407 AL355802.4-201ENST00000607635 548 ntBASIC0.23□□□□□ -2.37
CSMD3Q7Z407 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC0.23□□□□□ -2.37
CSMD3Q7Z407 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC0.23□□□□□ -2.37
CSMD3Q7Z407 AC100821.1-201ENST00000523153 2479 ntBASIC0.22□□□□□ -2.37
CSMD3Q7Z407 ANKRD26P2-201ENST00000445530 1710 ntBASIC0.22□□□□□ -2.37
CSMD3Q7Z407 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC0.22□□□□□ -2.37
CSMD3Q7Z407 SNORA25-201ENST00000384384 134 ntBASIC0.22□□□□□ -2.37
CSMD3Q7Z407 MIR10B-201ENST00000385011 110 ntBASIC0.22□□□□□ -2.37
CSMD3Q7Z407 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC0.22□□□□□ -2.37
CSMD3Q7Z407 AL512637.2-201ENST00000431287 1256 ntBASIC0.22□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 191 ms