Protein–RNA interactions for Protein: Q6ZT12

UBR3, E3 ubiquitin-protein ligase UBR3, humanhuman

Predictions only

Length 1,888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3Q6ZT12 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.18□□□□□ -2.38
UBR3Q6ZT12 RPL23AP95-201ENST00000426806 265 ntBASIC0.18□□□□□ -2.38
UBR3Q6ZT12 AP001893.2-201ENST00000526949 202 ntBASIC0.18□□□□□ -2.38
UBR3Q6ZT12 AP003465.2-201ENST00000602571 373 ntBASIC0.18□□□□□ -2.38
UBR3Q6ZT12 Z83818.1-201ENST00000603584 150 ntBASIC0.18□□□□□ -2.38
UBR3Q6ZT12 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC0.18□□□□□ -2.38
UBR3Q6ZT12 AC011374.2-201ENST00000607135 526 ntBASIC0.18□□□□□ -2.38
UBR3Q6ZT12 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC0.17□□□□□ -2.38
UBR3Q6ZT12 BET1P1-201ENST00000482276 359 ntBASIC0.17□□□□□ -2.38
UBR3Q6ZT12 TRAV32-201ENST00000553993 340 ntBASIC0.17□□□□□ -2.38
UBR3Q6ZT12 AC018618.2-201ENST00000604770 446 ntBASIC0.17□□□□□ -2.38
UBR3Q6ZT12 AC024060.1-201ENST00000607052 494 ntBASIC0.17□□□□□ -2.38
UBR3Q6ZT12 GDI2P1-201ENST00000429312 1336 ntBASIC0.16□□□□□ -2.38
UBR3Q6ZT12 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC0.16□□□□□ -2.38
UBR3Q6ZT12 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC0.16□□□□□ -2.38
UBR3Q6ZT12 RNU6-444P-201ENST00000383988 108 ntBASIC0.16□□□□□ -2.38
UBR3Q6ZT12 MIR135A2-201ENST00000384854 100 ntBASIC0.16□□□□□ -2.38
UBR3Q6ZT12 RNU1-119P-201ENST00000391122 165 ntBASIC0.16□□□□□ -2.38
UBR3Q6ZT12 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0.16□□□□□ -2.38
UBR3Q6ZT12 NDUFS5P4-201ENST00000412983 318 ntBASIC0.16□□□□□ -2.38
UBR3Q6ZT12 PNRC2P1-201ENST00000423940 420 ntBASIC0.16□□□□□ -2.38
UBR3Q6ZT12 AL590383.1-201ENST00000428602 75 ntBASIC0.16□□□□□ -2.38
UBR3Q6ZT12 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC0.16□□□□□ -2.38
UBR3Q6ZT12 MTND5P14-201ENST00000441481 1267 ntBASIC0.16□□□□□ -2.38
UBR3Q6ZT12 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC0.16□□□□□ -2.38
UBR3Q6ZT12 SCARNA1-201ENST00000517138 166 ntBASIC0.16□□□□□ -2.38
UBR3Q6ZT12 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.16□□□□□ -2.38
UBR3Q6ZT12 AL031176.1-201ENST00000604554 466 ntBASIC0.16□□□□□ -2.38
UBR3Q6ZT12 AC069304.2-201ENST00000605154 435 ntBASIC0.16□□□□□ -2.38
UBR3Q6ZT12 AC105129.3-201ENST00000605455 485 ntBASIC0.16□□□□□ -2.38
UBR3Q6ZT12 AC112220.3-201ENST00000605502 502 ntBASIC0.16□□□□□ -2.38
UBR3Q6ZT12 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC0.16□□□□□ -2.38
UBR3Q6ZT12 RNU6-105P-201ENST00000363909 104 ntBASIC0.16□□□□□ -2.38
UBR3Q6ZT12 RNU6-921P-201ENST00000384361 107 ntBASIC0.16□□□□□ -2.38
UBR3Q6ZT12 RNU6-700P-201ENST00000391043 107 ntBASIC0.16□□□□□ -2.38
UBR3Q6ZT12 RNA5SP25-201ENST00000410815 110 ntBASIC0.16□□□□□ -2.38
UBR3Q6ZT12 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC0.16□□□□□ -2.38
UBR3Q6ZT12 RPL36AP53-201ENST00000432891 316 ntBASIC0.16□□□□□ -2.38
UBR3Q6ZT12 RPL26P26-201ENST00000480251 434 ntBASIC0.16□□□□□ -2.38
UBR3Q6ZT12 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC0.16□□□□□ -2.38
UBR3Q6ZT12 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC0.16□□□□□ -2.38
UBR3Q6ZT12 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC0.16□□□□□ -2.38
UBR3Q6ZT12 NACAP3-201ENST00000552100 481 ntBASIC0.16□□□□□ -2.38
UBR3Q6ZT12 MIR4802-201ENST00000581881 80 ntBASIC0.16□□□□□ -2.38
UBR3Q6ZT12 RNU6-45P-201ENST00000384471 107 ntBASIC0.15□□□□□ -2.39
UBR3Q6ZT12 Y_RNA.549-201ENST00000384657 102 ntBASIC0.15□□□□□ -2.39
UBR3Q6ZT12 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.15□□□□□ -2.39
UBR3Q6ZT12 RPEP5-201ENST00000441137 268 ntBASIC0.15□□□□□ -2.39
UBR3Q6ZT12 HMGN3P1-201ENST00000453847 193 ntBASIC0.15□□□□□ -2.39
UBR3Q6ZT12 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC0.15□□□□□ -2.39
UBR3Q6ZT12 PTP4A1P4-201ENST00000512479 322 ntBASIC0.15□□□□□ -2.39
UBR3Q6ZT12 RN7SKP88-201ENST00000516847 250 ntBASIC0.15□□□□□ -2.39
UBR3Q6ZT12 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC0.15□□□□□ -2.39
UBR3Q6ZT12 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC0.15□□□□□ -2.39
UBR3Q6ZT12 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC0.15□□□□□ -2.39
UBR3Q6ZT12 CLIC4P2-201ENST00000601934 717 ntBASIC0.15□□□□□ -2.39
UBR3Q6ZT12 7SK.8-201ENST00000612110 250 ntBASIC0.15□□□□□ -2.39
UBR3Q6ZT12 AL357075.2-201ENST00000614906 189 ntBASIC0.15□□□□□ -2.39
UBR3Q6ZT12 7SK.11-201ENST00000615477 250 ntBASIC0.15□□□□□ -2.39
UBR3Q6ZT12 AC009509.4-201ENST00000619202 509 ntBASIC0.15□□□□□ -2.39
UBR3Q6ZT12 7SK.13-201ENST00000622040 250 ntBASIC0.15□□□□□ -2.39
UBR3Q6ZT12 AL353706.1-201ENST00000436728 494 ntBASIC0.14□□□□□ -2.39
UBR3Q6ZT12 GAPDHP17-201ENST00000449858 1001 ntBASIC0.14□□□□□ -2.39
UBR3Q6ZT12 AC067940.1-201ENST00000458411 300 ntBASIC0.14□□□□□ -2.39
UBR3Q6ZT12 RNA5SP134-201ENST00000516492 96 ntBASIC0.14□□□□□ -2.39
UBR3Q6ZT12 AC136619.2-201ENST00000563361 631 ntBASIC0.14□□□□□ -2.39
UBR3Q6ZT12 MIR6516-201ENST00000630554 81 ntBASIC0.14□□□□□ -2.39
UBR3Q6ZT12 MIR649-201ENST00000384843 97 ntBASIC0.14□□□□□ -2.39
UBR3Q6ZT12 AC119751.3-201ENST00000399720 670 ntBASIC0.14□□□□□ -2.39
UBR3Q6ZT12 AL022718.1-201ENST00000412004 84 ntBASIC0.14□□□□□ -2.39
UBR3Q6ZT12 PTGES3P4-201ENST00000426243 356 ntBASIC0.14□□□□□ -2.39
UBR3Q6ZT12 NANOGP2-201ENST00000435391 727 ntBASIC0.14□□□□□ -2.39
UBR3Q6ZT12 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC0.14□□□□□ -2.39
UBR3Q6ZT12 AC244505.3-201ENST00000454598 187 ntBASIC0.14□□□□□ -2.39
UBR3Q6ZT12 AC096720.1-201ENST00000604441 183 ntBASIC0.14□□□□□ -2.39
UBR3Q6ZT12 AP000860.1-201ENST00000605250 559 ntBASIC0.14□□□□□ -2.39
UBR3Q6ZT12 AL355802.4-201ENST00000607635 548 ntBASIC0.14□□□□□ -2.39
UBR3Q6ZT12 uc_338.15-201ENST00000615470 191 ntBASIC0.14□□□□□ -2.39
UBR3Q6ZT12 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC0.14□□□□□ -2.39
UBR3Q6ZT12 RNU6-923P-201ENST00000364753 107 ntBASIC0.13□□□□□ -2.39
UBR3Q6ZT12 RPS3AP36-201ENST00000398190 775 ntBASIC0.13□□□□□ -2.39
UBR3Q6ZT12 AC010385.1-201ENST00000412374 256 ntBASIC0.13□□□□□ -2.39
UBR3Q6ZT12 AL161935.2-201ENST00000414627 60 ntBASIC0.13□□□□□ -2.39
UBR3Q6ZT12 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC0.13□□□□□ -2.39
UBR3Q6ZT12 AC068135.1-201ENST00000446164 246 ntBASIC0.13□□□□□ -2.39
UBR3Q6ZT12 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC0.13□□□□□ -2.39
UBR3Q6ZT12 AC015724.1-201ENST00000478577 156 ntBASIC0.13□□□□□ -2.39
UBR3Q6ZT12 PDCD5P2-201ENST00000507570 312 ntBASIC0.13□□□□□ -2.39
UBR3Q6ZT12 RNVU1-2-201ENST00000516326 135 ntBASIC0.13□□□□□ -2.39
UBR3Q6ZT12 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC0.13□□□□□ -2.39
UBR3Q6ZT12 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC0.13□□□□□ -2.39
UBR3Q6ZT12 AL583856.2-201ENST00000606298 543 ntBASIC0.13□□□□□ -2.39
UBR3Q6ZT12 Z82243.1-201ENST00000609432 473 ntBASIC0.13□□□□□ -2.39
UBR3Q6ZT12 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC0.12□□□□□ -2.39
UBR3Q6ZT12 RNA5SP361-201ENST00000362686 118 ntBASIC0.12□□□□□ -2.39
UBR3Q6ZT12 SNORD114-24-201ENST00000365029 72 ntBASIC0.12□□□□□ -2.39
UBR3Q6ZT12 MIR329-1-201ENST00000385028 80 ntBASIC0.12□□□□□ -2.39
UBR3Q6ZT12 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC0.12□□□□□ -2.39
UBR3Q6ZT12 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC0.12□□□□□ -2.39
UBR3Q6ZT12 RSL24D1P8-201ENST00000434442 492 ntBASIC0.12□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 128.6 ms