Protein–RNA interactions for Protein: Q6ZMZ3

SYNE3, Nesprin-3, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3Q6ZMZ3 AC007547.1-201ENST00000462177 490 ntBASIC3.16□□□□□ -1.9
SYNE3Q6ZMZ3 AC087884.1-201ENST00000469738 328 ntBASIC3.16□□□□□ -1.9
SYNE3Q6ZMZ3 AC117503.1-201ENST00000472241 394 ntBASIC3.16□□□□□ -1.9
SYNE3Q6ZMZ3 AC018710.1-201ENST00000506509 158 ntBASIC3.16□□□□□ -1.9
SYNE3Q6ZMZ3 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.16□□□□□ -1.9
SYNE3Q6ZMZ3 AC010486.1-201ENST00000511793 424 ntBASIC3.16□□□□□ -1.9
SYNE3Q6ZMZ3 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC3.16□□□□□ -1.9
SYNE3Q6ZMZ3 AC090136.1-201ENST00000520009 240 ntBASIC3.16□□□□□ -1.9
SYNE3Q6ZMZ3 AC134698.4-201ENST00000523451 826 ntBASIC3.16□□□□□ -1.9
SYNE3Q6ZMZ3 LINC00933-203ENST00000559812 219 ntBASIC3.16□□□□□ -1.9
SYNE3Q6ZMZ3 AL033523.1-201ENST00000605153 153 ntBASIC3.16□□□□□ -1.9
SYNE3Q6ZMZ3 Z82243.1-201ENST00000609432 473 ntBASIC3.16□□□□□ -1.9
SYNE3Q6ZMZ3 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC3.16□□□□□ -1.9
SYNE3Q6ZMZ3 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC3.16□□□□□ -1.9
SYNE3Q6ZMZ3 AC002064.3-201ENST00000623448 346 ntBASIC3.16□□□□□ -1.9
SYNE3Q6ZMZ3 U6.99-201ENST00000637524 83 ntBASIC3.16□□□□□ -1.9
SYNE3Q6ZMZ3 AC093536.2-201ENST00000565257 1406 ntBASIC3.16□□□□□ -1.9
SYNE3Q6ZMZ3 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
SYNE3Q6ZMZ3 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
SYNE3Q6ZMZ3 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC3.15□□□□□ -1.9
SYNE3Q6ZMZ3 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3.15□□□□□ -1.9
SYNE3Q6ZMZ3 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC3.15□□□□□ -1.91
SYNE3Q6ZMZ3 Y_RNA.324-201ENST00000365165 102 ntBASIC3.15□□□□□ -1.91
SYNE3Q6ZMZ3 MIR10A-201ENST00000385043 110 ntBASIC3.15□□□□□ -1.91
SYNE3Q6ZMZ3 MIR9-1-201ENST00000385198 89 ntBASIC3.15□□□□□ -1.91
SYNE3Q6ZMZ3 HMGN2P35-201ENST00000412164 270 ntBASIC3.15□□□□□ -1.91
SYNE3Q6ZMZ3 RPL21P111-201ENST00000418453 477 ntBASIC3.15□□□□□ -1.91
SYNE3Q6ZMZ3 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.15□□□□□ -1.91
SYNE3Q6ZMZ3 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC3.15□□□□□ -1.91
SYNE3Q6ZMZ3 RPS15AP5-201ENST00000436276 388 ntBASIC3.15□□□□□ -1.91
SYNE3Q6ZMZ3 NDUFA5P4-201ENST00000436704 385 ntBASIC3.15□□□□□ -1.91
SYNE3Q6ZMZ3 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC3.15□□□□□ -1.91
SYNE3Q6ZMZ3 AC025750.2-201ENST00000442609 450 ntBASIC3.15□□□□□ -1.91
SYNE3Q6ZMZ3 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC3.15□□□□□ -1.91
SYNE3Q6ZMZ3 AC233279.1-201ENST00000455300 423 ntBASIC3.15□□□□□ -1.91
SYNE3Q6ZMZ3 RN7SL297P-201ENST00000483161 293 ntBASIC3.15□□□□□ -1.91
SYNE3Q6ZMZ3 TRBVA-201ENST00000498804 316 ntBASIC3.15□□□□□ -1.91
SYNE3Q6ZMZ3 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC3.15□□□□□ -1.91
SYNE3Q6ZMZ3 SNORD19.2-201ENST00000516978 73 ntBASIC3.15□□□□□ -1.91
SYNE3Q6ZMZ3 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC3.15□□□□□ -1.91
SYNE3Q6ZMZ3 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC3.15□□□□□ -1.91
SYNE3Q6ZMZ3 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC3.15□□□□□ -1.91
SYNE3Q6ZMZ3 AC079600.2-201ENST00000550076 130 ntBASIC3.15□□□□□ -1.91
SYNE3Q6ZMZ3 AC021739.1-201ENST00000559631 174 ntBASIC3.15□□□□□ -1.91
SYNE3Q6ZMZ3 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.15□□□□□ -1.91
SYNE3Q6ZMZ3 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
SYNE3Q6ZMZ3 DLEU2_6.1-201ENST00000610536 112 ntBASIC3.15□□□□□ -1.91
SYNE3Q6ZMZ3 FAM157A-202ENST00000615155 405 ntBASIC3.15□□□□□ -1.91
SYNE3Q6ZMZ3 SCARNA4-202ENST00000625402 129 ntBASIC3.15□□□□□ -1.91
SYNE3Q6ZMZ3 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.15□□□□□ -1.91
SYNE3Q6ZMZ3 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.15□□□□□ -1.91
SYNE3Q6ZMZ3 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.91
SYNE3Q6ZMZ3 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.15□□□□□ -1.91
SYNE3Q6ZMZ3 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.14□□□□□ -1.91
SYNE3Q6ZMZ3 ANKRD18EP-201ENST00000405487 2632 ntBASIC3.14□□□□□ -1.91
SYNE3Q6ZMZ3 Y_RNA.166-201ENST00000363730 102 ntBASIC3.14□□□□□ -1.91
SYNE3Q6ZMZ3 MIR34A-201ENST00000385130 110 ntBASIC3.14□□□□□ -1.91
SYNE3Q6ZMZ3 FO393413.1-201ENST00000402892 195 ntBASIC3.14□□□□□ -1.91
SYNE3Q6ZMZ3 RAP1BP3-201ENST00000407180 549 ntBASIC3.14□□□□□ -1.91
SYNE3Q6ZMZ3 AC009161.1-201ENST00000417306 376 ntBASIC3.14□□□□□ -1.91
SYNE3Q6ZMZ3 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.14□□□□□ -1.91
SYNE3Q6ZMZ3 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.14□□□□□ -1.91
SYNE3Q6ZMZ3 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.14□□□□□ -1.91
SYNE3Q6ZMZ3 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.14□□□□□ -1.91
SYNE3Q6ZMZ3 SNORA19.2-201ENST00000516013 114 ntBASIC3.14□□□□□ -1.91
SYNE3Q6ZMZ3 AC069113.1-201ENST00000517763 267 ntBASIC3.14□□□□□ -1.91
SYNE3Q6ZMZ3 AC006199.1-201ENST00000548728 219 ntBASIC3.14□□□□□ -1.91
SYNE3Q6ZMZ3 GTF3AP2-201ENST00000557014 266 ntBASIC3.14□□□□□ -1.91
SYNE3Q6ZMZ3 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC3.14□□□□□ -1.91
SYNE3Q6ZMZ3 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC3.14□□□□□ -1.91
SYNE3Q6ZMZ3 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC3.14□□□□□ -1.91
SYNE3Q6ZMZ3 RPL23AP78-201ENST00000599928 470 ntBASIC3.14□□□□□ -1.91
SYNE3Q6ZMZ3 CTHRC1P1-201ENST00000605383 469 ntBASIC3.14□□□□□ -1.91
SYNE3Q6ZMZ3 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC3.14□□□□□ -1.91
SYNE3Q6ZMZ3 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
SYNE3Q6ZMZ3 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
SYNE3Q6ZMZ3 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.14□□□□□ -1.91
SYNE3Q6ZMZ3 AC099654.7-201ENST00000635788 2127 ntBASIC3.13□□□□□ -1.91
SYNE3Q6ZMZ3 Y_RNA.212-201ENST00000364177 102 ntBASIC3.13□□□□□ -1.91
SYNE3Q6ZMZ3 Y_RNA.414-201ENST00000384011 101 ntBASIC3.13□□□□□ -1.91
SYNE3Q6ZMZ3 AL356057.2-201ENST00000403318 432 ntBASIC3.13□□□□□ -1.91
SYNE3Q6ZMZ3 U3.37-201ENST00000408528 213 ntBASIC3.13□□□□□ -1.91
SYNE3Q6ZMZ3 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.13□□□□□ -1.91
SYNE3Q6ZMZ3 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC3.13□□□□□ -1.91
SYNE3Q6ZMZ3 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC3.13□□□□□ -1.91
SYNE3Q6ZMZ3 AC090525.1-201ENST00000479116 478 ntBASIC3.13□□□□□ -1.91
SYNE3Q6ZMZ3 AC083904.1-201ENST00000487828 231 ntBASIC3.13□□□□□ -1.91
SYNE3Q6ZMZ3 SEM1P1-201ENST00000506694 209 ntBASIC3.13□□□□□ -1.91
SYNE3Q6ZMZ3 COPS8P3-201ENST00000526024 482 ntBASIC3.13□□□□□ -1.91
SYNE3Q6ZMZ3 MIR4635-201ENST00000583759 79 ntBASIC3.13□□□□□ -1.91
SYNE3Q6ZMZ3 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.13□□□□□ -1.91
SYNE3Q6ZMZ3 MIR5692C1-201ENST00000585309 91 ntBASIC3.13□□□□□ -1.91
SYNE3Q6ZMZ3 NUTF2P8-201ENST00000604593 363 ntBASIC3.13□□□□□ -1.91
SYNE3Q6ZMZ3 APOOP1-201ENST00000604695 592 ntBASIC3.13□□□□□ -1.91
SYNE3Q6ZMZ3 ATP1B3P1-201ENST00000605365 821 ntBASIC3.13□□□□□ -1.91
SYNE3Q6ZMZ3 AL161629.2-201ENST00000615347 275 ntBASIC3.13□□□□□ -1.91
SYNE3Q6ZMZ3 AC022306.2-201ENST00000617563 647 ntBASIC3.13□□□□□ -1.91
SYNE3Q6ZMZ3 AC010378.1-201ENST00000619270 362 ntBASIC3.13□□□□□ -1.91
SYNE3Q6ZMZ3 RMST_7.1-201ENST00000621935 268 ntBASIC3.13□□□□□ -1.91
SYNE3Q6ZMZ3 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 126.5 ms