Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 RNA5SP503-201ENST00000517047 117 ntBASIC2.63□□□□□ -1.99
CTR9Q6PD62 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC2.63□□□□□ -1.99
CTR9Q6PD62 AC078814.3-201ENST00000553036 491 ntBASIC2.63□□□□□ -1.99
CTR9Q6PD62 MIR4703-201ENST00000577728 79 ntBASIC2.63□□□□□ -1.99
CTR9Q6PD62 MIR4648-201ENST00000580107 72 ntBASIC2.63□□□□□ -1.99
CTR9Q6PD62 MTATP6P3-201ENST00000581686 676 ntBASIC2.63□□□□□ -1.99
CTR9Q6PD62 AC116312.1-201ENST00000606841 314 ntBASIC2.63□□□□□ -1.99
CTR9Q6PD62 AC013562.2-201ENST00000611632 603 ntBASIC2.63□□□□□ -1.99
CTR9Q6PD62 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.63□□□□□ -1.99
CTR9Q6PD62 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.63□□□□□ -1.99
CTR9Q6PD62 AC009831.4-201ENST00000620744 325 ntBASIC2.63□□□□□ -1.99
CTR9Q6PD62 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
CTR9Q6PD62 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
CTR9Q6PD62 ZNF720P1-201ENST00000562403 1939 ntBASIC2.62□□□□□ -1.99
CTR9Q6PD62 MIRLET7G-201ENST00000362280 84 ntBASIC2.62□□□□□ -1.99
CTR9Q6PD62 SNORD3E-201ENST00000362899 217 ntBASIC2.62□□□□□ -1.99
CTR9Q6PD62 Y_RNA.409-201ENST00000383990 98 ntBASIC2.62□□□□□ -1.99
CTR9Q6PD62 RNU6-116P-201ENST00000384042 109 ntBASIC2.62□□□□□ -1.99
CTR9Q6PD62 CALM2P3-201ENST00000400429 449 ntBASIC2.62□□□□□ -1.99
CTR9Q6PD62 MIR1261-201ENST00000408659 82 ntBASIC2.62□□□□□ -1.99
CTR9Q6PD62 RNU2-49P-201ENST00000410666 184 ntBASIC2.62□□□□□ -1.99
CTR9Q6PD62 RNA5SP111-201ENST00000411386 101 ntBASIC2.62□□□□□ -1.99
CTR9Q6PD62 HMGB3P2-201ENST00000411913 584 ntBASIC2.62□□□□□ -1.99
CTR9Q6PD62 MTCO3P30-201ENST00000426425 670 ntBASIC2.62□□□□□ -1.99
CTR9Q6PD62 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC2.62□□□□□ -1.99
CTR9Q6PD62 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.62□□□□□ -1.99
CTR9Q6PD62 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.62□□□□□ -1.99
CTR9Q6PD62 AL360271.2-201ENST00000447710 161 ntBASIC2.62□□□□□ -1.99
CTR9Q6PD62 MTND1P18-201ENST00000448191 573 ntBASIC2.62□□□□□ -1.99
CTR9Q6PD62 AC026801.1-201ENST00000497178 464 ntBASIC2.62□□□□□ -1.99
CTR9Q6PD62 MTCO3P9-201ENST00000506989 781 ntBASIC2.62□□□□□ -1.99
CTR9Q6PD62 RN7SKP219-201ENST00000516825 296 ntBASIC2.62□□□□□ -1.99
CTR9Q6PD62 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC2.62□□□□□ -1.99
CTR9Q6PD62 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC2.62□□□□□ -1.99
CTR9Q6PD62 NACAP3-201ENST00000552100 481 ntBASIC2.62□□□□□ -1.99
CTR9Q6PD62 AC021739.1-201ENST00000559631 174 ntBASIC2.62□□□□□ -1.99
CTR9Q6PD62 EIF1P4-201ENST00000572664 335 ntBASIC2.62□□□□□ -1.99
CTR9Q6PD62 AC008536.2-201ENST00000607284 349 ntBASIC2.62□□□□□ -1.99
CTR9Q6PD62 AL359880.1-201ENST00000621879 266 ntBASIC2.62□□□□□ -1.99
CTR9Q6PD62 U6.99-201ENST00000637524 83 ntBASIC2.62□□□□□ -1.99
CTR9Q6PD62 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
CTR9Q6PD62 Y_RNA.3-201ENST00000362331 103 ntBASIC2.61□□□□□ -1.99
CTR9Q6PD62 RNU6-1287P-201ENST00000362914 107 ntBASIC2.61□□□□□ -1.99
CTR9Q6PD62 RNU6-1060P-201ENST00000384664 107 ntBASIC2.61□□□□□ -1.99
CTR9Q6PD62 MTCO3P40-201ENST00000392516 676 ntBASIC2.61□□□□□ -1.99
CTR9Q6PD62 U3.40-201ENST00000408706 208 ntBASIC2.61□□□□□ -1.99
CTR9Q6PD62 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.61□□□□□ -1.99
CTR9Q6PD62 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
CTR9Q6PD62 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.61□□□□□ -1.99
CTR9Q6PD62 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
CTR9Q6PD62 MTND1P1-201ENST00000445453 368 ntBASIC2.61□□□□□ -1.99
CTR9Q6PD62 AC105417.1-201ENST00000514691 285 ntBASIC2.61□□□□□ -1.99
CTR9Q6PD62 RNA5SP200-201ENST00000516360 103 ntBASIC2.61□□□□□ -1.99
CTR9Q6PD62 AP003034.1-201ENST00000534621 422 ntBASIC2.61□□□□□ -1.99
CTR9Q6PD62 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC2.61□□□□□ -1.99
CTR9Q6PD62 MIR548AC-201ENST00000585049 88 ntBASIC2.61□□□□□ -1.99
CTR9Q6PD62 AP001330.5-201ENST00000607176 411 ntBASIC2.61□□□□□ -1.99
CTR9Q6PD62 AP001596.2-201ENST00000608410 312 ntBASIC2.61□□□□□ -1.99
CTR9Q6PD62 AC092954.2-201ENST00000609103 430 ntBASIC2.61□□□□□ -1.99
CTR9Q6PD62 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.61□□□□□ -1.99
CTR9Q6PD62 MIR6873-201ENST00000622788 63 ntBASIC2.61□□□□□ -1.99
CTR9Q6PD62 AC139792.3-201ENST00000623525 224 ntBASIC2.61□□□□□ -1.99
CTR9Q6PD62 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC2.61□□□□□ -1.99
CTR9Q6PD62 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
CTR9Q6PD62 AC099654.12-201ENST00000639868 649 ntBASIC2.61□□□□□ -1.99
CTR9Q6PD62 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.61□□□□□ -1.99
CTR9Q6PD62 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.6□□□□□ -1.99
CTR9Q6PD62 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
CTR9Q6PD62 ANKRD36BP1-202ENST00000604892 1417 ntBASIC2.6□□□□□ -1.99
CTR9Q6PD62 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.6□□□□□ -1.99
CTR9Q6PD62 SNORA38-201ENST00000363946 132 ntBASIC2.6□□□□□ -1.99
CTR9Q6PD62 SNORA67.3-201ENST00000384366 140 ntBASIC2.6□□□□□ -1.99
CTR9Q6PD62 SNORA64-201ENST00000384674 134 ntBASIC2.6□□□□□ -1.99
CTR9Q6PD62 MIR518D-201ENST00000385014 87 ntBASIC2.6□□□□□ -1.99
CTR9Q6PD62 MIR767-201ENST00000390228 109 ntBASIC2.6□□□□□ -1.99
CTR9Q6PD62 AL023284.1-201ENST00000403956 276 ntBASIC2.6□□□□□ -1.99
CTR9Q6PD62 RN7SKP284-201ENST00000411002 343 ntBASIC2.6□□□□□ -1.99
CTR9Q6PD62 USP9YP6-201ENST00000413550 854 ntBASIC2.6□□□□□ -1.99
CTR9Q6PD62 AC007560.1-201ENST00000426912 237 ntBASIC2.6□□□□□ -1.99
CTR9Q6PD62 AL606489.2-201ENST00000433886 234 ntBASIC2.6□□□□□ -1.99
CTR9Q6PD62 IPO7P1-201ENST00000442031 636 ntBASIC2.6□□□□□ -1.99
CTR9Q6PD62 AL078601.1-201ENST00000444542 271 ntBASIC2.6□□□□□ -1.99
CTR9Q6PD62 FDX1P2-201ENST00000450769 375 ntBASIC2.6□□□□□ -1.99
CTR9Q6PD62 AC003071.1-201ENST00000451219 789 ntBASIC2.6□□□□□ -1.99
CTR9Q6PD62 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC2.6□□□□□ -1.99
CTR9Q6PD62 AL583843.1-201ENST00000456070 346 ntBASIC2.6□□□□□ -1.99
CTR9Q6PD62 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC2.6□□□□□ -1.99
CTR9Q6PD62 GMFBP1-201ENST00000467831 427 ntBASIC2.6□□□□□ -1.99
CTR9Q6PD62 FAM92A1P2-202ENST00000504766 877 ntBASIC2.6□□□□□ -1.99
CTR9Q6PD62 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC2.6□□□□□ -1.99
CTR9Q6PD62 SNORA31.18-201ENST00000517043 134 ntBASIC2.6□□□□□ -1.99
CTR9Q6PD62 AP001893.2-201ENST00000526949 202 ntBASIC2.6□□□□□ -1.99
CTR9Q6PD62 AC104383.1-201ENST00000530297 370 ntBASIC2.6□□□□□ -1.99
CTR9Q6PD62 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC2.6□□□□□ -1.99
CTR9Q6PD62 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.6□□□□□ -1.99
CTR9Q6PD62 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.6□□□□□ -1.99
CTR9Q6PD62 AC012507.3-201ENST00000603556 477 ntBASIC2.6□□□□□ -1.99
CTR9Q6PD62 AL138889.2-201ENST00000603883 242 ntBASIC2.6□□□□□ -1.99
CTR9Q6PD62 AC008945.2-201ENST00000606056 604 ntBASIC2.6□□□□□ -1.99
CTR9Q6PD62 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC2.6□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 117.7 ms