Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 AC114482.1-201ENST00000418010 247 ntBASIC3.01□□□□□ -1.93
ZNF549Q6P9A3 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC3.01□□□□□ -1.93
ZNF549Q6P9A3 MRPS18CP6-201ENST00000423587 223 ntBASIC3.01□□□□□ -1.93
ZNF549Q6P9A3 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC3.01□□□□□ -1.93
ZNF549Q6P9A3 AC006028.1-201ENST00000438379 402 ntBASIC3.01□□□□□ -1.93
ZNF549Q6P9A3 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC3.01□□□□□ -1.93
ZNF549Q6P9A3 BTF3P15-201ENST00000455606 336 ntBASIC3.01□□□□□ -1.93
ZNF549Q6P9A3 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.01□□□□□ -1.93
ZNF549Q6P9A3 RPL21P104-201ENST00000464143 478 ntBASIC3.01□□□□□ -1.93
ZNF549Q6P9A3 AC010285.1-201ENST00000470580 392 ntBASIC3.01□□□□□ -1.93
ZNF549Q6P9A3 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC3.01□□□□□ -1.93
ZNF549Q6P9A3 RPS4XP13-201ENST00000483219 789 ntBASIC3.01□□□□□ -1.93
ZNF549Q6P9A3 RN7SL283P-201ENST00000489055 303 ntBASIC3.01□□□□□ -1.93
ZNF549Q6P9A3 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.01□□□□□ -1.93
ZNF549Q6P9A3 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC3.01□□□□□ -1.93
ZNF549Q6P9A3 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.01□□□□□ -1.93
ZNF549Q6P9A3 MIR5004-201ENST00000579078 107 ntBASIC3.01□□□□□ -1.93
ZNF549Q6P9A3 MIR5692A1-201ENST00000580523 69 ntBASIC3.01□□□□□ -1.93
ZNF549Q6P9A3 MIR548AC-201ENST00000585049 88 ntBASIC3.01□□□□□ -1.93
ZNF549Q6P9A3 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.01□□□□□ -1.93
ZNF549Q6P9A3 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC3.01□□□□□ -1.93
ZNF549Q6P9A3 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.01□□□□□ -1.93
ZNF549Q6P9A3 AC096577.2-201ENST00000611455 153 ntBASIC3.01□□□□□ -1.93
ZNF549Q6P9A3 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.01□□□□□ -1.93
ZNF549Q6P9A3 Z99571.1-201ENST00000636677 394 ntBASIC3.01□□□□□ -1.93
ZNF549Q6P9A3 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.01□□□□□ -1.93
ZNF549Q6P9A3 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
ZNF549Q6P9A3 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
ZNF549Q6P9A3 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3□□□□□ -1.93
ZNF549Q6P9A3 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3□□□□□ -1.93
ZNF549Q6P9A3 Y_RNA.80-201ENST00000362996 102 ntBASIC3□□□□□ -1.93
ZNF549Q6P9A3 RNU1-115P-201ENST00000365329 160 ntBASIC3□□□□□ -1.93
ZNF549Q6P9A3 SNORA41-201ENST00000384675 132 ntBASIC3□□□□□ -1.93
ZNF549Q6P9A3 MIR517A-201ENST00000385001 87 ntBASIC3□□□□□ -1.93
ZNF549Q6P9A3 HNRNPDLP1-201ENST00000412834 550 ntBASIC3□□□□□ -1.93
ZNF549Q6P9A3 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3□□□□□ -1.93
ZNF549Q6P9A3 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3□□□□□ -1.93
ZNF549Q6P9A3 HMGB1P27-201ENST00000431429 603 ntBASIC3□□□□□ -1.93
ZNF549Q6P9A3 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3□□□□□ -1.93
ZNF549Q6P9A3 SNRPGP3-201ENST00000469405 227 ntBASIC3□□□□□ -1.93
ZNF549Q6P9A3 AC108860.1-201ENST00000484521 383 ntBASIC3□□□□□ -1.93
ZNF549Q6P9A3 AC116655.1-201ENST00000508324 901 ntBASIC3□□□□□ -1.93
ZNF549Q6P9A3 AC008716.1-201ENST00000511084 513 ntBASIC3□□□□□ -1.93
ZNF549Q6P9A3 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3□□□□□ -1.93
ZNF549Q6P9A3 Y_RNA.661-201ENST00000516003 99 ntBASIC3□□□□□ -1.93
ZNF549Q6P9A3 RN7SKP43-201ENST00000516173 320 ntBASIC3□□□□□ -1.93
ZNF549Q6P9A3 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC3□□□□□ -1.93
ZNF549Q6P9A3 AC104576.1-201ENST00000524225 88 ntBASIC3□□□□□ -1.93
ZNF549Q6P9A3 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3□□□□□ -1.93
ZNF549Q6P9A3 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC3□□□□□ -1.93
ZNF549Q6P9A3 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC3□□□□□ -1.93
ZNF549Q6P9A3 AC004817.2-201ENST00000561794 651 ntBASIC3□□□□□ -1.93
ZNF549Q6P9A3 AC008269.2-201ENST00000561915 1105 ntBASIC3□□□□□ -1.93
ZNF549Q6P9A3 FAM60BP-201ENST00000578364 658 ntBASIC3□□□□□ -1.93
ZNF549Q6P9A3 AC113195.1-201ENST00000579952 141 ntBASIC3□□□□□ -1.93
ZNF549Q6P9A3 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3□□□□□ -1.93
ZNF549Q6P9A3 AC098826.3-201ENST00000603823 466 ntBASIC3□□□□□ -1.93
ZNF549Q6P9A3 AC123912.5-201ENST00000605470 343 ntBASIC3□□□□□ -1.93
ZNF549Q6P9A3 YPEL5P2-201ENST00000605553 359 ntBASIC3□□□□□ -1.93
ZNF549Q6P9A3 RNU6-85P-201ENST00000605989 107 ntBASIC3□□□□□ -1.93
ZNF549Q6P9A3 RMST_4.1-201ENST00000616886 107 ntBASIC3□□□□□ -1.93
ZNF549Q6P9A3 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3□□□□□ -1.93
ZNF549Q6P9A3 MPP6-209ENST00000625307 126 ntTSL 5 BASIC3□□□□□ -1.93
ZNF549Q6P9A3 AC073346.2-201ENST00000624724 2058 ntBASIC3□□□□□ -1.93
ZNF549Q6P9A3 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
ZNF549Q6P9A3 AF127577.6-201ENST00000623352 2191 ntBASIC3□□□□□ -1.93
ZNF549Q6P9A3 AC005183.1-201ENST00000603687 1979 ntBASIC3□□□□□ -1.93
ZNF549Q6P9A3 OR4G2P-202ENST00000641004 1759 ntBASIC3□□□□□ -1.93
ZNF549Q6P9A3 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC2.99□□□□□ -1.93
ZNF549Q6P9A3 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC2.99□□□□□ -1.93
ZNF549Q6P9A3 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.99□□□□□ -1.93
ZNF549Q6P9A3 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC2.99□□□□□ -1.93
ZNF549Q6P9A3 Y_RNA.47-201ENST00000362697 108 ntBASIC2.99□□□□□ -1.93
ZNF549Q6P9A3 RNU5A-1-201ENST00000362698 116 ntBASIC2.99□□□□□ -1.93
ZNF549Q6P9A3 RNU6-512P-201ENST00000364438 103 ntBASIC2.99□□□□□ -1.93
ZNF549Q6P9A3 U3.19-201ENST00000390893 196 ntBASIC2.99□□□□□ -1.93
ZNF549Q6P9A3 Z85995.1-201ENST00000415547 335 ntBASIC2.99□□□□□ -1.93
ZNF549Q6P9A3 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.99□□□□□ -1.93
ZNF549Q6P9A3 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC2.99□□□□□ -1.93
ZNF549Q6P9A3 MYL8P-204ENST00000431574 518 ntBASIC2.99□□□□□ -1.93
ZNF549Q6P9A3 AL133396.1-201ENST00000432048 687 ntBASIC2.99□□□□□ -1.93
ZNF549Q6P9A3 AC244505.4-201ENST00000434905 287 ntBASIC2.99□□□□□ -1.93
ZNF549Q6P9A3 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC2.99□□□□□ -1.93
ZNF549Q6P9A3 AL731563.1-201ENST00000442202 214 ntBASIC2.99□□□□□ -1.93
ZNF549Q6P9A3 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.99□□□□□ -1.93
ZNF549Q6P9A3 SSXP5-201ENST00000443473 287 ntBASIC2.99□□□□□ -1.93
ZNF549Q6P9A3 U8.20-201ENST00000459445 131 ntBASIC2.99□□□□□ -1.93
ZNF549Q6P9A3 AC128713.1-201ENST00000471495 306 ntBASIC2.99□□□□□ -1.93
ZNF549Q6P9A3 AC092185.1-201ENST00000491371 97 ntBASIC2.99□□□□□ -1.93
ZNF549Q6P9A3 AC006445.1-201ENST00000491925 405 ntBASIC2.99□□□□□ -1.93
ZNF549Q6P9A3 VN1R104P-201ENST00000505115 1009 ntBASIC2.99□□□□□ -1.93
ZNF549Q6P9A3 RNU4-77P-201ENST00000516692 156 ntBASIC2.99□□□□□ -1.93
ZNF549Q6P9A3 MAL2-206ENST00000522187 547 ntTSL 4 BASIC2.99□□□□□ -1.93
ZNF549Q6P9A3 AC084851.1-201ENST00000529105 249 ntBASIC2.99□□□□□ -1.93
ZNF549Q6P9A3 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.99□□□□□ -1.93
ZNF549Q6P9A3 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC2.99□□□□□ -1.93
ZNF549Q6P9A3 7SK.7-201ENST00000603504 247 ntBASIC2.99□□□□□ -1.93
ZNF549Q6P9A3 NUTF2P8-201ENST00000604593 363 ntBASIC2.99□□□□□ -1.93
ZNF549Q6P9A3 AL161798.1-201ENST00000604630 131 ntBASIC2.99□□□□□ -1.93
ZNF549Q6P9A3 SNORD58B-201ENST00000607313 66 ntBASIC2.99□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms