Protein–RNA interactions for Protein: Q07065

CKAP4, Cytoskeleton-associated protein 4, humanhuman

Known RBP Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4Q07065 AL354950.2-201ENST00000617939 290 ntBASIC2.1□□□□□ -2.07
CKAP4Q07065 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.1□□□□□ -2.07
CKAP4Q07065 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.1□□□□□ -2.07
CKAP4Q07065 MTND4P35-201ENST00000604257 1375 ntBASIC2.1□□□□□ -2.07
CKAP4Q07065 AL109809.4-201ENST00000603520 2185 ntBASIC2.09□□□□□ -2.07
CKAP4Q07065 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
CKAP4Q07065 Y_RNA.38-201ENST00000362617 102 ntBASIC2.09□□□□□ -2.07
CKAP4Q07065 RNU6-451P-201ENST00000362921 107 ntBASIC2.09□□□□□ -2.07
CKAP4Q07065 RNY3P3-201ENST00000363816 102 ntBASIC2.09□□□□□ -2.07
CKAP4Q07065 SNORD46.1-201ENST00000364139 104 ntBASIC2.09□□□□□ -2.07
CKAP4Q07065 RNU6-741P-201ENST00000383889 107 ntBASIC2.09□□□□□ -2.07
CKAP4Q07065 Y_RNA.453-201ENST00000384223 109 ntBASIC2.09□□□□□ -2.07
CKAP4Q07065 Y_RNA.534-201ENST00000384599 112 ntBASIC2.09□□□□□ -2.07
CKAP4Q07065 Y_RNA.573-201ENST00000384763 105 ntBASIC2.09□□□□□ -2.07
CKAP4Q07065 RNU6-903P-201ENST00000391270 109 ntBASIC2.09□□□□□ -2.07
CKAP4Q07065 RNU2-29P-201ENST00000410423 189 ntBASIC2.09□□□□□ -2.07
CKAP4Q07065 AC092809.3-201ENST00000415453 231 ntBASIC2.09□□□□□ -2.07
CKAP4Q07065 AC009963.1-201ENST00000417265 157 ntBASIC2.09□□□□□ -2.07
CKAP4Q07065 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC2.09□□□□□ -2.07
CKAP4Q07065 SNRPEP10-201ENST00000420249 274 ntBASIC2.09□□□□□ -2.07
CKAP4Q07065 AC092047.1-201ENST00000424997 240 ntBASIC2.09□□□□□ -2.07
CKAP4Q07065 AL590383.1-201ENST00000428602 75 ntBASIC2.09□□□□□ -2.07
CKAP4Q07065 AL139415.2-201ENST00000431968 163 ntBASIC2.09□□□□□ -2.07
CKAP4Q07065 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC2.09□□□□□ -2.07
CKAP4Q07065 AL512844.2-201ENST00000433990 593 ntBASIC2.09□□□□□ -2.07
CKAP4Q07065 AL596276.1-201ENST00000434465 418 ntBASIC2.09□□□□□ -2.07
CKAP4Q07065 SEPT14P3-201ENST00000439401 183 ntBASIC2.09□□□□□ -2.07
CKAP4Q07065 AL732372.2-207ENST00000445840 183 ntBASIC2.09□□□□□ -2.07
CKAP4Q07065 SEPT14P2-201ENST00000453405 183 ntBASIC2.09□□□□□ -2.07
CKAP4Q07065 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC2.09□□□□□ -2.07
CKAP4Q07065 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC2.09□□□□□ -2.07
CKAP4Q07065 AL162395.1-201ENST00000457882 422 ntBASIC2.09□□□□□ -2.07
CKAP4Q07065 AC092989.1-201ENST00000481235 277 ntBASIC2.09□□□□□ -2.07
CKAP4Q07065 SEPT14P4-201ENST00000513445 186 ntBASIC2.09□□□□□ -2.07
CKAP4Q07065 RNU6-1282P-201ENST00000516735 96 ntBASIC2.09□□□□□ -2.07
CKAP4Q07065 RNA5SP503-201ENST00000517047 117 ntBASIC2.09□□□□□ -2.07
CKAP4Q07065 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC2.09□□□□□ -2.07
CKAP4Q07065 BTF3P12-201ENST00000519620 469 ntBASIC2.09□□□□□ -2.07
CKAP4Q07065 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC2.09□□□□□ -2.07
CKAP4Q07065 FO082796.1-201ENST00000523795 183 ntBASIC2.09□□□□□ -2.07
CKAP4Q07065 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC2.09□□□□□ -2.07
CKAP4Q07065 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC2.09□□□□□ -2.07
CKAP4Q07065 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC2.09□□□□□ -2.07
CKAP4Q07065 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC2.09□□□□□ -2.07
CKAP4Q07065 AL138976.2-201ENST00000563989 694 ntBASIC2.09□□□□□ -2.07
CKAP4Q07065 AC002545.1-201ENST00000592511 181 ntBASIC2.09□□□□□ -2.07
CKAP4Q07065 AC098826.3-201ENST00000603823 466 ntBASIC2.09□□□□□ -2.07
CKAP4Q07065 AL161798.1-201ENST00000604630 131 ntBASIC2.09□□□□□ -2.07
CKAP4Q07065 SNORD14A-201ENST00000606526 91 ntBASIC2.09□□□□□ -2.07
CKAP4Q07065 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
CKAP4Q07065 UBE2Q2P6-201ENST00000612666 153 ntBASIC2.09□□□□□ -2.07
CKAP4Q07065 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
CKAP4Q07065 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC2.09□□□□□ -2.07
CKAP4Q07065 AL359547.2-201ENST00000615810 418 ntBASIC2.09□□□□□ -2.07
CKAP4Q07065 AC002553.4-201ENST00000616896 331 ntBASIC2.09□□□□□ -2.07
CKAP4Q07065 YWHAEP7-203ENST00000622054 312 ntBASIC2.09□□□□□ -2.07
CKAP4Q07065 AC012640.5-201ENST00000623897 319 ntBASIC2.09□□□□□ -2.07
CKAP4Q07065 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.09□□□□□ -2.07
CKAP4Q07065 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.09□□□□□ -2.08
CKAP4Q07065 AC007785.2-201ENST00000598627 1916 ntBASIC2.09□□□□□ -2.08
CKAP4Q07065 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.08
CKAP4Q07065 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.08□□□□□ -2.08
CKAP4Q07065 UBE2L2-201ENST00000254302 429 ntBASIC2.08□□□□□ -2.08
CKAP4Q07065 RNU6-552P-201ENST00000362869 119 ntBASIC2.08□□□□□ -2.08
CKAP4Q07065 RNU6-1167P-201ENST00000363227 94 ntBASIC2.08□□□□□ -2.08
CKAP4Q07065 RNU6-288P-201ENST00000363690 104 ntBASIC2.08□□□□□ -2.08
CKAP4Q07065 RNU1-91P-201ENST00000364746 163 ntBASIC2.08□□□□□ -2.08
CKAP4Q07065 RNU6-190P-201ENST00000384154 102 ntBASIC2.08□□□□□ -2.08
CKAP4Q07065 UBE2V1P2-201ENST00000397758 440 ntBASIC2.08□□□□□ -2.08
CKAP4Q07065 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.08□□□□□ -2.08
CKAP4Q07065 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC2.08□□□□□ -2.08
CKAP4Q07065 UBE2Q2P12-201ENST00000414573 204 ntBASIC2.08□□□□□ -2.08
CKAP4Q07065 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.08□□□□□ -2.08
CKAP4Q07065 MTCYBP8-201ENST00000422855 651 ntBASIC2.08□□□□□ -2.08
CKAP4Q07065 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC2.08□□□□□ -2.08
CKAP4Q07065 CALM2P2-201ENST00000428512 440 ntBASIC2.08□□□□□ -2.08
CKAP4Q07065 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC2.08□□□□□ -2.08
CKAP4Q07065 HMGB1P27-201ENST00000431429 603 ntBASIC2.08□□□□□ -2.08
CKAP4Q07065 AL591704.1-201ENST00000432574 275 ntBASIC2.08□□□□□ -2.08
CKAP4Q07065 AL591212.2-201ENST00000433923 257 ntBASIC2.08□□□□□ -2.08
CKAP4Q07065 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.08□□□□□ -2.08
CKAP4Q07065 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC2.08□□□□□ -2.08
CKAP4Q07065 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC2.08□□□□□ -2.08
CKAP4Q07065 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC2.08□□□□□ -2.08
CKAP4Q07065 AL160314.1-201ENST00000490836 438 ntBASIC2.08□□□□□ -2.08
CKAP4Q07065 AC022493.1-201ENST00000492984 337 ntBASIC2.08□□□□□ -2.08
CKAP4Q07065 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC2.08□□□□□ -2.08
CKAP4Q07065 RBBP4P6-201ENST00000508098 202 ntBASIC2.08□□□□□ -2.08
CKAP4Q07065 AC104806.1-201ENST00000508720 308 ntBASIC2.08□□□□□ -2.08
CKAP4Q07065 RNU6-123P-201ENST00000516163 102 ntBASIC2.08□□□□□ -2.08
CKAP4Q07065 Y_RNA.689-201ENST00000516589 107 ntBASIC2.08□□□□□ -2.08
CKAP4Q07065 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC2.08□□□□□ -2.08
CKAP4Q07065 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC2.08□□□□□ -2.08
CKAP4Q07065 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC2.08□□□□□ -2.08
CKAP4Q07065 MTND1P35-201ENST00000526739 508 ntBASIC2.08□□□□□ -2.08
CKAP4Q07065 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.08□□□□□ -2.08
CKAP4Q07065 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.08□□□□□ -2.08
CKAP4Q07065 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC2.08□□□□□ -2.08
CKAP4Q07065 MIR4424-201ENST00000585257 86 ntBASIC2.08□□□□□ -2.08
CKAP4Q07065 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC2.08□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms