Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 Y_RNA.480-201ENST00000384364 102 ntBASIC2.94□□□□□ -1.94
LTBQ06643 RNU6-331P-201ENST00000384724 107 ntBASIC2.94□□□□□ -1.94
LTBQ06643 RNU6-1105P-201ENST00000384774 107 ntBASIC2.94□□□□□ -1.94
LTBQ06643 SNORD73A-201ENST00000386062 65 ntBASIC2.94□□□□□ -1.94
LTBQ06643 RNU2-3P-201ENST00000410144 191 ntBASIC2.94□□□□□ -1.94
LTBQ06643 RNA5SP129-201ENST00000410276 118 ntBASIC2.94□□□□□ -1.94
LTBQ06643 RNU6-607P-201ENST00000411283 108 ntBASIC2.94□□□□□ -1.94
LTBQ06643 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.94□□□□□ -1.94
LTBQ06643 MCFD2P1-201ENST00000417812 300 ntBASIC2.94□□□□□ -1.94
LTBQ06643 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC2.94□□□□□ -1.94
LTBQ06643 TRAPPC2P4-201ENST00000421750 331 ntBASIC2.94□□□□□ -1.94
LTBQ06643 AL358176.2-201ENST00000425769 204 ntBASIC2.94□□□□□ -1.94
LTBQ06643 HMGB1P9-201ENST00000429856 646 ntBASIC2.94□□□□□ -1.94
LTBQ06643 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC2.94□□□□□ -1.94
LTBQ06643 MTND5P22-201ENST00000458380 195 ntBASIC2.94□□□□□ -1.94
LTBQ06643 RNU7-187P-201ENST00000458985 68 ntBASIC2.94□□□□□ -1.94
LTBQ06643 RNU7-138P-201ENST00000459479 64 ntBASIC2.94□□□□□ -1.94
LTBQ06643 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC2.94□□□□□ -1.94
LTBQ06643 AC022493.1-201ENST00000492984 337 ntBASIC2.94□□□□□ -1.94
LTBQ06643 RNA5SP384-201ENST00000516615 116 ntBASIC2.94□□□□□ -1.94
LTBQ06643 Y_RNA.720-201ENST00000517166 92 ntBASIC2.94□□□□□ -1.94
LTBQ06643 MAL2-206ENST00000522187 547 ntTSL 4 BASIC2.94□□□□□ -1.94
LTBQ06643 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC2.94□□□□□ -1.94
LTBQ06643 AC022080.3-201ENST00000544433 482 ntBASIC2.94□□□□□ -1.94
LTBQ06643 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC2.94□□□□□ -1.94
LTBQ06643 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC2.94□□□□□ -1.94
LTBQ06643 MED28P6-201ENST00000558776 231 ntBASIC2.94□□□□□ -1.94
LTBQ06643 NUTF2P8-201ENST00000604593 363 ntBASIC2.94□□□□□ -1.94
LTBQ06643 AL161798.1-201ENST00000604630 131 ntBASIC2.94□□□□□ -1.94
LTBQ06643 RNU6-85P-201ENST00000605989 107 ntBASIC2.94□□□□□ -1.94
LTBQ06643 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC2.94□□□□□ -1.94
LTBQ06643 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
LTBQ06643 AL161423.1-201ENST00000613700 262 ntBASIC2.94□□□□□ -1.94
LTBQ06643 AC007485.1-201ENST00000616755 206 ntBASIC2.94□□□□□ -1.94
LTBQ06643 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC2.94□□□□□ -1.94
LTBQ06643 AC091925.1-201ENST00000623204 462 ntBASIC2.94□□□□□ -1.94
LTBQ06643 AL137790.1-201ENST00000634283 177 ntBASIC2.94□□□□□ -1.94
LTBQ06643 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
LTBQ06643 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC2.94□□□□□ -1.94
LTBQ06643 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.94□□□□□ -1.94
LTBQ06643 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.94□□□□□ -1.94
LTBQ06643 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC2.93□□□□□ -1.94
LTBQ06643 AL136164.4-201ENST00000625013 2135 ntBASIC2.93□□□□□ -1.94
LTBQ06643 DEFB108F-201ENST00000344638 222 ntBASIC2.93□□□□□ -1.94
LTBQ06643 MIR422A-201ENST00000362286 90 ntBASIC2.93□□□□□ -1.94
LTBQ06643 RNU6-1167P-201ENST00000363227 94 ntBASIC2.93□□□□□ -1.94
LTBQ06643 Y_RNA.151-201ENST00000363566 112 ntBASIC2.93□□□□□ -1.94
LTBQ06643 RNU6-173P-201ENST00000364215 104 ntBASIC2.93□□□□□ -1.94
LTBQ06643 RNU6-1329P-201ENST00000365664 107 ntBASIC2.93□□□□□ -1.94
LTBQ06643 RNU6-574P-201ENST00000384265 107 ntBASIC2.93□□□□□ -1.94
LTBQ06643 SNORA75.6-201ENST00000391318 127 ntBASIC2.93□□□□□ -1.94
LTBQ06643 Y_RNA.605-201ENST00000410577 105 ntBASIC2.93□□□□□ -1.94
LTBQ06643 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC2.93□□□□□ -1.94
LTBQ06643 SNORD5.1-201ENST00000458800 75 ntBASIC2.93□□□□□ -1.94
LTBQ06643 AL135752.1-201ENST00000479477 471 ntBASIC2.93□□□□□ -1.94
LTBQ06643 RNU1-61P-201ENST00000516107 151 ntBASIC2.93□□□□□ -1.94
LTBQ06643 RNU1-86P-201ENST00000516108 154 ntBASIC2.93□□□□□ -1.94
LTBQ06643 RNU1-107P-201ENST00000516617 154 ntBASIC2.93□□□□□ -1.94
LTBQ06643 AC245166.1-201ENST00000521012 253 ntBASIC2.93□□□□□ -1.94
LTBQ06643 AC104576.1-201ENST00000524225 88 ntBASIC2.93□□□□□ -1.94
LTBQ06643 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC2.93□□□□□ -1.94
LTBQ06643 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC2.93□□□□□ -1.94
LTBQ06643 LRRC37A5P-203ENST00000580181 585 ntBASIC2.93□□□□□ -1.94
LTBQ06643 MIR4680-201ENST00000580906 66 ntBASIC2.93□□□□□ -1.94
LTBQ06643 AC002545.1-201ENST00000592511 181 ntBASIC2.93□□□□□ -1.94
LTBQ06643 AC011494.1-201ENST00000596454 237 ntBASIC2.93□□□□□ -1.94
LTBQ06643 AC107294.3-201ENST00000609211 526 ntBASIC2.93□□□□□ -1.94
LTBQ06643 AC011890.2-201ENST00000613393 294 ntBASIC2.93□□□□□ -1.94
LTBQ06643 AC083806.3-201ENST00000614016 455 ntBASIC2.93□□□□□ -1.94
LTBQ06643 PLCE1P1-201ENST00000622094 305 ntBASIC2.93□□□□□ -1.94
LTBQ06643 TTK-211ENST00000627129 240 ntTSL 5 BASIC2.93□□□□□ -1.94
LTBQ06643 SDAD1P2-201ENST00000441308 2028 ntBASIC2.93□□□□□ -1.94
LTBQ06643 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.93□□□□□ -1.94
LTBQ06643 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC2.93□□□□□ -1.94
LTBQ06643 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.93□□□□□ -1.94
LTBQ06643 BCLAF1P1-201ENST00000505813 2752 ntBASIC2.92□□□□□ -1.94
LTBQ06643 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC2.92□□□□□ -1.94
LTBQ06643 Z83843.1-201ENST00000604070 3685 ntBASIC2.92□□□□□ -1.94
LTBQ06643 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.92□□□□□ -1.94
LTBQ06643 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC2.92□□□□□ -1.94
LTBQ06643 RNU6-1032P-201ENST00000384100 107 ntBASIC2.92□□□□□ -1.94
LTBQ06643 RNU6-842P-201ENST00000384269 107 ntBASIC2.92□□□□□ -1.94
LTBQ06643 Y_RNA.496-201ENST00000384444 101 ntBASIC2.92□□□□□ -1.94
LTBQ06643 RNU6-1179P-201ENST00000384667 107 ntBASIC2.92□□□□□ -1.94
LTBQ06643 RNU6-1106P-201ENST00000390845 107 ntBASIC2.92□□□□□ -1.94
LTBQ06643 SNORA48.8-201ENST00000391324 134 ntBASIC2.92□□□□□ -1.94
LTBQ06643 EI24P2-201ENST00000397776 1076 ntBASIC2.92□□□□□ -1.94
LTBQ06643 MIR1261-201ENST00000408659 82 ntBASIC2.92□□□□□ -1.94
LTBQ06643 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC2.92□□□□□ -1.94
LTBQ06643 AL353621.1-201ENST00000418219 243 ntBASIC2.92□□□□□ -1.94
LTBQ06643 UBE2D3P2-201ENST00000424409 445 ntBASIC2.92□□□□□ -1.94
LTBQ06643 AL645568.3-201ENST00000433683 316 ntBASIC2.92□□□□□ -1.94
LTBQ06643 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC2.92□□□□□ -1.94
LTBQ06643 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.92□□□□□ -1.94
LTBQ06643 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC2.92□□□□□ -1.94
LTBQ06643 RPL31P60-201ENST00000478450 367 ntBASIC2.92□□□□□ -1.94
LTBQ06643 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC2.92□□□□□ -1.94
LTBQ06643 RPS15AP34-201ENST00000487776 387 ntBASIC2.92□□□□□ -1.94
LTBQ06643 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.92□□□□□ -1.94
LTBQ06643 RNU6-470P-201ENST00000515954 104 ntBASIC2.92□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms