Protein–RNA interactions for Protein: Q05048

CSTF1, Cleavage stimulation factor subunit 1, humanhuman

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1Q05048 U2.19-201ENST00000618602 191 ntBASIC2.11□□□□□ -2.07
CSTF1Q05048 RNU2-1-201ENST00000618664 191 ntBASIC2.11□□□□□ -2.07
CSTF1Q05048 U2.6-201ENST00000619225 191 ntBASIC2.11□□□□□ -2.07
CSTF1Q05048 U2.5-201ENST00000619465 191 ntBASIC2.11□□□□□ -2.07
CSTF1Q05048 MIR5739-201ENST00000619803 80 ntBASIC2.11□□□□□ -2.07
CSTF1Q05048 U2.10-201ENST00000620268 191 ntBASIC2.11□□□□□ -2.07
CSTF1Q05048 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC2.11□□□□□ -2.07
CSTF1Q05048 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
CSTF1Q05048 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
CSTF1Q05048 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
CSTF1Q05048 MTND4P4-201ENST00000439033 1366 ntBASIC2.1□□□□□ -2.07
CSTF1Q05048 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.1□□□□□ -2.07
CSTF1Q05048 AL596028.1-201ENST00000326971 197 ntBASIC2.1□□□□□ -2.07
CSTF1Q05048 MIR378A-201ENST00000362177 66 ntBASIC2.1□□□□□ -2.07
CSTF1Q05048 MIR558-201ENST00000384920 94 ntBASIC2.1□□□□□ -2.07
CSTF1Q05048 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC2.1□□□□□ -2.07
CSTF1Q05048 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC2.1□□□□□ -2.07
CSTF1Q05048 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.1□□□□□ -2.07
CSTF1Q05048 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC2.1□□□□□ -2.07
CSTF1Q05048 PGBD4P6-201ENST00000421501 610 ntBASIC2.1□□□□□ -2.07
CSTF1Q05048 AL365338.1-201ENST00000422282 858 ntBASIC2.1□□□□□ -2.07
CSTF1Q05048 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC2.1□□□□□ -2.07
CSTF1Q05048 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC2.1□□□□□ -2.07
CSTF1Q05048 MTND2P4-201ENST00000445034 1004 ntBASIC2.1□□□□□ -2.07
CSTF1Q05048 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC2.1□□□□□ -2.07
CSTF1Q05048 AC022493.1-201ENST00000492984 337 ntBASIC2.1□□□□□ -2.07
CSTF1Q05048 RPL23AP63-201ENST00000498752 471 ntBASIC2.1□□□□□ -2.07
CSTF1Q05048 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC2.1□□□□□ -2.07
CSTF1Q05048 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC2.1□□□□□ -2.07
CSTF1Q05048 AC112206.3-201ENST00000514578 389 ntBASIC2.1□□□□□ -2.07
CSTF1Q05048 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC2.1□□□□□ -2.07
CSTF1Q05048 VN1R80P-201ENST00000597126 338 ntBASIC2.1□□□□□ -2.07
CSTF1Q05048 AC025165.5-201ENST00000602802 578 ntBASIC2.1□□□□□ -2.07
CSTF1Q05048 AL670379.2-201ENST00000604983 252 ntBASIC2.1□□□□□ -2.07
CSTF1Q05048 AL121992.2-201ENST00000606262 256 ntBASIC2.1□□□□□ -2.07
CSTF1Q05048 AC024581.2-201ENST00000619986 252 ntBASIC2.1□□□□□ -2.07
CSTF1Q05048 AC092656.1-203ENST00000624134 423 ntBASIC2.1□□□□□ -2.07
CSTF1Q05048 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.1□□□□□ -2.07
CSTF1Q05048 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.1□□□□□ -2.07
CSTF1Q05048 MT-TH-201ENST00000387441 69 ntBASIC2.09□□□□□ -2.07
CSTF1Q05048 SNORA40.3-201ENST00000390964 122 ntBASIC2.09□□□□□ -2.07
CSTF1Q05048 SNORA17.3-201ENST00000391159 129 ntBASIC2.09□□□□□ -2.07
CSTF1Q05048 AL049545.1-201ENST00000401856 572 ntBASIC2.09□□□□□ -2.07
CSTF1Q05048 CIR1P3-201ENST00000405137 479 ntBASIC2.09□□□□□ -2.07
CSTF1Q05048 AL355497.1-201ENST00000406262 551 ntBASIC2.09□□□□□ -2.07
CSTF1Q05048 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.09□□□□□ -2.07
CSTF1Q05048 AL365203.2-201ENST00000423444 196 ntBASIC2.09□□□□□ -2.07
CSTF1Q05048 MED13P1-201ENST00000428342 171 ntBASIC2.09□□□□□ -2.07
CSTF1Q05048 AL031667.1-201ENST00000440222 725 ntBASIC2.09□□□□□ -2.07
CSTF1Q05048 MTATP6P26-201ENST00000445926 662 ntBASIC2.09□□□□□ -2.07
CSTF1Q05048 PSPHP1-201ENST00000450062 261 ntBASIC2.09□□□□□ -2.07
CSTF1Q05048 AC003071.1-201ENST00000451219 789 ntBASIC2.09□□□□□ -2.07
CSTF1Q05048 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
CSTF1Q05048 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC2.09□□□□□ -2.07
CSTF1Q05048 AC010486.3-201ENST00000511602 785 ntBASIC2.09□□□□□ -2.07
CSTF1Q05048 RNA5SP182-201ENST00000516064 82 ntBASIC2.09□□□□□ -2.07
CSTF1Q05048 Vault.3-201ENST00000516676 95 ntBASIC2.09□□□□□ -2.07
CSTF1Q05048 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.09□□□□□ -2.07
CSTF1Q05048 AC110588.1-201ENST00000559699 137 ntBASIC2.09□□□□□ -2.07
CSTF1Q05048 MTCYBP33-201ENST00000575007 1130 ntBASIC2.09□□□□□ -2.07
CSTF1Q05048 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.09□□□□□ -2.07
CSTF1Q05048 AC093788.1-201ENST00000609356 927 ntBASIC2.09□□□□□ -2.07
CSTF1Q05048 U4atac.1-201ENST00000618345 95 ntBASIC2.09□□□□□ -2.07
CSTF1Q05048 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.08
CSTF1Q05048 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.08
CSTF1Q05048 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
CSTF1Q05048 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
CSTF1Q05048 MIR412-201ENST00000362142 91 ntBASIC2.08□□□□□ -2.08
CSTF1Q05048 RNU4-21P-201ENST00000362802 126 ntBASIC2.08□□□□□ -2.08
CSTF1Q05048 RNU6-179P-201ENST00000363350 107 ntBASIC2.08□□□□□ -2.08
CSTF1Q05048 SNORA16B-201ENST00000364674 135 ntBASIC2.08□□□□□ -2.08
CSTF1Q05048 Y_RNA.355-201ENST00000365462 98 ntBASIC2.08□□□□□ -2.08
CSTF1Q05048 RNU6-1032P-201ENST00000384100 107 ntBASIC2.08□□□□□ -2.08
CSTF1Q05048 RNU4-52P-201ENST00000384209 138 ntBASIC2.08□□□□□ -2.08
CSTF1Q05048 SNORA26.8-201ENST00000391306 124 ntBASIC2.08□□□□□ -2.08
CSTF1Q05048 RPS3AP3-201ENST00000411933 242 ntBASIC2.08□□□□□ -2.08
CSTF1Q05048 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
CSTF1Q05048 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.08□□□□□ -2.08
CSTF1Q05048 AL445685.2-201ENST00000422551 342 ntBASIC2.08□□□□□ -2.08
CSTF1Q05048 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC2.08□□□□□ -2.08
CSTF1Q05048 AC009238.1-201ENST00000442165 424 ntBASIC2.08□□□□□ -2.08
CSTF1Q05048 MTND6P13-201ENST00000443510 523 ntBASIC2.08□□□□□ -2.08
CSTF1Q05048 AC009237.6-201ENST00000446969 424 ntBASIC2.08□□□□□ -2.08
CSTF1Q05048 RAP1BP2-201ENST00000478270 544 ntBASIC2.08□□□□□ -2.08
CSTF1Q05048 AC109486.1-201ENST00000486833 374 ntBASIC2.08□□□□□ -2.08
CSTF1Q05048 SCARNA24.1-201ENST00000516465 137 ntBASIC2.08□□□□□ -2.08
CSTF1Q05048 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC2.08□□□□□ -2.08
CSTF1Q05048 AP000889.2-201ENST00000532684 490 ntBASIC2.08□□□□□ -2.08
CSTF1Q05048 AL356057.1-201ENST00000533798 831 ntBASIC2.08□□□□□ -2.08
CSTF1Q05048 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC2.08□□□□□ -2.08
CSTF1Q05048 AC007229.1-201ENST00000590455 412 ntBASIC2.08□□□□□ -2.08
CSTF1Q05048 AC010620.1-201ENST00000601088 1102 ntBASIC2.08□□□□□ -2.08
CSTF1Q05048 AC087045.1-201ENST00000605856 382 ntBASIC2.08□□□□□ -2.08
CSTF1Q05048 MIR6840-201ENST00000611937 71 ntBASIC2.08□□□□□ -2.08
CSTF1Q05048 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC2.08□□□□□ -2.08
CSTF1Q05048 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.08□□□□□ -2.08
CSTF1Q05048 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC2.08□□□□□ -2.08
CSTF1Q05048 AC009233.1-201ENST00000616477 371 ntBASIC2.08□□□□□ -2.08
CSTF1Q05048 AL031601.2-202ENST00000622650 282 ntBASIC2.08□□□□□ -2.08
CSTF1Q05048 AC244517.12-201ENST00000623581 663 ntBASIC2.08□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 232.8 ms