Protein–RNA interactions for Protein: Q00978

IRF9, Interferon regulatory factor 9, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9Q00978 AC093852.1-201ENST00000503587 266 ntBASIC3.63□□□□□ -1.83
IRF9Q00978 MRPS35P2-201ENST00000508242 191 ntBASIC3.63□□□□□ -1.83
IRF9Q00978 RNA5SP164-201ENST00000516533 110 ntBASIC3.63□□□□□ -1.83
IRF9Q00978 AC040926.1-201ENST00000530195 238 ntBASIC3.63□□□□□ -1.83
IRF9Q00978 AP002404.1-201ENST00000532005 451 ntBASIC3.63□□□□□ -1.83
IRF9Q00978 AC006199.1-201ENST00000548728 219 ntBASIC3.63□□□□□ -1.83
IRF9Q00978 AC106785.1-201ENST00000565935 262 ntBASIC3.63□□□□□ -1.83
IRF9Q00978 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.63□□□□□ -1.83
IRF9Q00978 AC006077.1-201ENST00000604746 343 ntBASIC3.63□□□□□ -1.83
IRF9Q00978 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.63□□□□□ -1.83
IRF9Q00978 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.63□□□□□ -1.83
IRF9Q00978 AL138880.2-201ENST00000616214 239 ntBASIC3.63□□□□□ -1.83
IRF9Q00978 U2.1-201ENST00000618978 145 ntBASIC3.63□□□□□ -1.83
IRF9Q00978 MFSD8-236ENST00000641509 4050 ntBASIC3.63□□□□□ -1.83
IRF9Q00978 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
IRF9Q00978 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC3.62□□□□□ -1.83
IRF9Q00978 AF127577.6-201ENST00000623352 2191 ntBASIC3.62□□□□□ -1.83
IRF9Q00978 AC066616.2-201ENST00000559334 1481 ntBASIC3.62□□□□□ -1.83
IRF9Q00978 RNU1-64P-201ENST00000365443 163 ntBASIC3.62□□□□□ -1.83
IRF9Q00978 Y_RNA.574-201ENST00000384766 95 ntBASIC3.62□□□□□ -1.83
IRF9Q00978 MIR30B-201ENST00000384850 88 ntBASIC3.62□□□□□ -1.83
IRF9Q00978 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
IRF9Q00978 SNORA12.2-201ENST00000391040 156 ntBASIC3.62□□□□□ -1.83
IRF9Q00978 MIR1252-201ENST00000408861 65 ntBASIC3.62□□□□□ -1.83
IRF9Q00978 RNA5SP44-201ENST00000410446 133 ntBASIC3.62□□□□□ -1.83
IRF9Q00978 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC3.62□□□□□ -1.83
IRF9Q00978 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.62□□□□□ -1.83
IRF9Q00978 MTCO3P29-201ENST00000432119 779 ntBASIC3.62□□□□□ -1.83
IRF9Q00978 CYCSP32-201ENST00000440548 321 ntBASIC3.62□□□□□ -1.83
IRF9Q00978 SNRPGP3-201ENST00000469405 227 ntBASIC3.62□□□□□ -1.83
IRF9Q00978 MED28P2-201ENST00000475771 317 ntBASIC3.62□□□□□ -1.83
IRF9Q00978 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC3.62□□□□□ -1.83
IRF9Q00978 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.62□□□□□ -1.83
IRF9Q00978 RNU6-911P-201ENST00000516523 104 ntBASIC3.62□□□□□ -1.83
IRF9Q00978 Y_RNA.715-201ENST00000517082 110 ntBASIC3.62□□□□□ -1.83
IRF9Q00978 AC009812.2-201ENST00000517657 457 ntBASIC3.62□□□□□ -1.83
IRF9Q00978 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC3.62□□□□□ -1.83
IRF9Q00978 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
IRF9Q00978 AP000867.2-201ENST00000532468 320 ntBASIC3.62□□□□□ -1.83
IRF9Q00978 AC104581.2-201ENST00000572227 430 ntBASIC3.62□□□□□ -1.83
IRF9Q00978 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.62□□□□□ -1.83
IRF9Q00978 7SK.7-201ENST00000603504 247 ntBASIC3.62□□□□□ -1.83
IRF9Q00978 AC019159.1-201ENST00000605094 187 ntBASIC3.62□□□□□ -1.83
IRF9Q00978 AL021879.1-201ENST00000611756 288 ntBASIC3.62□□□□□ -1.83
IRF9Q00978 MIR6875-201ENST00000617506 72 ntBASIC3.62□□□□□ -1.83
IRF9Q00978 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
IRF9Q00978 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.62□□□□□ -1.83
IRF9Q00978 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
IRF9Q00978 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.62□□□□□ -1.83
IRF9Q00978 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
IRF9Q00978 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
IRF9Q00978 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.61□□□□□ -1.83
IRF9Q00978 RNU6-874P-201ENST00000362390 105 ntBASIC3.61□□□□□ -1.83
IRF9Q00978 SET-203ENST00000372688 801 ntTSL 2 BASIC3.61□□□□□ -1.83
IRF9Q00978 Y_RNA.526-201ENST00000384572 110 ntBASIC3.61□□□□□ -1.83
IRF9Q00978 MIR628-201ENST00000385229 95 ntBASIC3.61□□□□□ -1.83
IRF9Q00978 SNORA3.3-201ENST00000408712 125 ntBASIC3.61□□□□□ -1.83
IRF9Q00978 AC007969.2-201ENST00000441891 191 ntBASIC3.61□□□□□ -1.83
IRF9Q00978 AL031659.1-201ENST00000447075 539 ntBASIC3.61□□□□□ -1.83
IRF9Q00978 MTCO3P8-201ENST00000453691 755 ntBASIC3.61□□□□□ -1.83
IRF9Q00978 AC010099.1-201ENST00000455434 375 ntBASIC3.61□□□□□ -1.83
IRF9Q00978 AC034236.1-201ENST00000469891 373 ntBASIC3.61□□□□□ -1.83
IRF9Q00978 AC131281.1-201ENST00000522984 164 ntBASIC3.61□□□□□ -1.83
IRF9Q00978 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.61□□□□□ -1.83
IRF9Q00978 AC004817.2-201ENST00000561794 651 ntBASIC3.61□□□□□ -1.83
IRF9Q00978 AC009163.5-201ENST00000575421 637 ntBASIC3.61□□□□□ -1.83
IRF9Q00978 MIR1254-2-201ENST00000579553 63 ntBASIC3.61□□□□□ -1.83
IRF9Q00978 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC3.61□□□□□ -1.83
IRF9Q00978 AC100812.1-201ENST00000607622 580 ntBASIC3.61□□□□□ -1.83
IRF9Q00978 AC068831.7-201ENST00000616954 363 ntBASIC3.61□□□□□ -1.83
IRF9Q00978 MIR3199-2-201ENST00000636243 86 ntBASIC3.61□□□□□ -1.83
IRF9Q00978 AP000553.6-201ENST00000641242 118 ntBASIC3.61□□□□□ -1.83
IRF9Q00978 AC233981.2-201ENST00000611524 1614 ntBASIC3.61□□□□□ -1.83
IRF9Q00978 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
IRF9Q00978 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
IRF9Q00978 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
IRF9Q00978 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
IRF9Q00978 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.61□□□□□ -1.83
IRF9Q00978 AC008725.1-201ENST00000605123 2263 ntBASIC3.6□□□□□ -1.83
IRF9Q00978 Y_RNA.152-201ENST00000363578 100 ntBASIC3.6□□□□□ -1.83
IRF9Q00978 RNU1-140P-201ENST00000365040 165 ntBASIC3.6□□□□□ -1.83
IRF9Q00978 Y_RNA.405-201ENST00000383979 100 ntBASIC3.6□□□□□ -1.83
IRF9Q00978 RNU6-26P-201ENST00000383985 107 ntBASIC3.6□□□□□ -1.83
IRF9Q00978 RNU6-968P-201ENST00000384076 107 ntBASIC3.6□□□□□ -1.83
IRF9Q00978 Y_RNA.451-201ENST00000384200 100 ntBASIC3.6□□□□□ -1.83
IRF9Q00978 Y_RNA.524-201ENST00000384564 100 ntBASIC3.6□□□□□ -1.83
IRF9Q00978 Y_RNA.561-201ENST00000384694 100 ntBASIC3.6□□□□□ -1.83
IRF9Q00978 AL138878.1-201ENST00000405131 347 ntBASIC3.6□□□□□ -1.83
IRF9Q00978 Y_RNA.592-201ENST00000410274 109 ntBASIC3.6□□□□□ -1.83
IRF9Q00978 RNA5SP38-201ENST00000410750 119 ntBASIC3.6□□□□□ -1.83
IRF9Q00978 SNORA57.3-201ENST00000411095 141 ntBASIC3.6□□□□□ -1.83
IRF9Q00978 AL358453.1-201ENST00000422522 250 ntBASIC3.6□□□□□ -1.83
IRF9Q00978 AL591419.1-201ENST00000427423 339 ntBASIC3.6□□□□□ -1.83
IRF9Q00978 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC3.6□□□□□ -1.83
IRF9Q00978 AL714022.1-201ENST00000439897 151 ntBASIC3.6□□□□□ -1.83
IRF9Q00978 RPS3AP12-201ENST00000443616 753 ntBASIC3.6□□□□□ -1.83
IRF9Q00978 SSXP4-201ENST00000451349 245 ntBASIC3.6□□□□□ -1.83
IRF9Q00978 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.6□□□□□ -1.83
IRF9Q00978 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC3.6□□□□□ -1.83
IRF9Q00978 AC097462.2-201ENST00000504623 481 ntBASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 122 ms