Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 Y_RNA.255-201ENST00000364581 97 ntBASIC0.09□□□□□ -2.4
HSPG2P98160 RNU6-26P-201ENST00000383985 107 ntBASIC0.09□□□□□ -2.4
HSPG2P98160 Y_RNA.583-201ENST00000391033 113 ntBASIC0.09□□□□□ -2.4
HSPG2P98160 MIR1303-201ENST00000408625 86 ntBASIC0.09□□□□□ -2.4
HSPG2P98160 BPY2DP-201ENST00000422208 265 ntBASIC0.09□□□□□ -2.4
HSPG2P98160 AC139712.2-201ENST00000424302 339 ntBASIC0.09□□□□□ -2.4
HSPG2P98160 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC0.09□□□□□ -2.4
HSPG2P98160 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC0.09□□□□□ -2.4
HSPG2P98160 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC0.09□□□□□ -2.4
HSPG2P98160 SNORA31.22-201ENST00000517204 135 ntBASIC0.09□□□□□ -2.4
HSPG2P98160 HMSD-204ENST00000526932 162 ntTSL 3 BASIC0.09□□□□□ -2.4
HSPG2P98160 MIR4768-201ENST00000585270 74 ntBASIC0.09□□□□□ -2.4
HSPG2P98160 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC0.09□□□□□ -2.4
HSPG2P98160 RNU4-32P-201ENST00000363404 141 ntBASIC0.08□□□□□ -2.4
HSPG2P98160 RNU6-374P-201ENST00000364146 108 ntBASIC0.08□□□□□ -2.4
HSPG2P98160 RNU6-217P-201ENST00000384164 104 ntBASIC0.08□□□□□ -2.4
HSPG2P98160 Y_RNA.495-201ENST00000384435 112 ntBASIC0.08□□□□□ -2.4
HSPG2P98160 Y_RNA.551-201ENST00000384661 102 ntBASIC0.08□□□□□ -2.4
HSPG2P98160 MTND4LP10-201ENST00000435146 291 ntBASIC0.08□□□□□ -2.4
HSPG2P98160 MTCO2P20-201ENST00000437339 673 ntBASIC0.08□□□□□ -2.4
HSPG2P98160 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC0.08□□□□□ -2.4
HSPG2P98160 AC134050.1-201ENST00000495088 933 ntBASIC0.08□□□□□ -2.4
HSPG2P98160 AC025465.3-201ENST00000510570 311 ntBASIC0.08□□□□□ -2.4
HSPG2P98160 ACA64.5-201ENST00000516207 127 ntBASIC0.08□□□□□ -2.4
HSPG2P98160 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC0.08□□□□□ -2.4
HSPG2P98160 AC073968.1-201ENST00000618594 637 ntBASIC0.08□□□□□ -2.4
HSPG2P98160 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC0.08□□□□□ -2.4
HSPG2P98160 SNORD14D-201ENST00000384390 87 ntBASIC0.08□□□□□ -2.4
HSPG2P98160 RNU6-441P-201ENST00000384545 106 ntBASIC0.08□□□□□ -2.4
HSPG2P98160 MIR608-201ENST00000384820 100 ntBASIC0.08□□□□□ -2.4
HSPG2P98160 AC068135.1-201ENST00000446164 246 ntBASIC0.08□□□□□ -2.4
HSPG2P98160 AC093677.1-201ENST00000514414 678 ntBASIC0.08□□□□□ -2.4
HSPG2P98160 AC008494.2-201ENST00000514544 370 ntBASIC0.08□□□□□ -2.4
HSPG2P98160 RNU6ATAC13P-201ENST00000516152 131 ntBASIC0.08□□□□□ -2.4
HSPG2P98160 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC0.08□□□□□ -2.4
HSPG2P98160 AC125611.1-201ENST00000549563 229 ntBASIC0.08□□□□□ -2.4
HSPG2P98160 RNU6-91P-201ENST00000607774 107 ntBASIC0.08□□□□□ -2.4
HSPG2P98160 AL589655.1-201ENST00000405398 482 ntBASIC0.08□□□□□ -2.4
HSPG2P98160 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.08□□□□□ -2.4
HSPG2P98160 HMGN2P22-201ENST00000427588 175 ntBASIC0.08□□□□□ -2.4
HSPG2P98160 AL049734.2-201ENST00000441066 616 ntBASIC0.08□□□□□ -2.4
HSPG2P98160 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC0.08□□□□□ -2.4
HSPG2P98160 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC0.08□□□□□ -2.4
HSPG2P98160 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC0.08□□□□□ -2.4
HSPG2P98160 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC0.08□□□□□ -2.4
HSPG2P98160 AC008443.7-201ENST00000622195 246 ntBASIC0.08□□□□□ -2.4
HSPG2P98160 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC0.08□□□□□ -2.4
HSPG2P98160 AC027335.2-201ENST00000624030 375 ntBASIC0.08□□□□□ -2.4
HSPG2P98160 OR5T3-201ENST00000303059 1023 ntBASIC0.08□□□□□ -2.4
HSPG2P98160 RNU6-1126P-201ENST00000384002 107 ntBASIC0.08□□□□□ -2.4
HSPG2P98160 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC0.08□□□□□ -2.4
HSPG2P98160 UBE2V1P4-201ENST00000425374 344 ntBASIC0.08□□□□□ -2.4
HSPG2P98160 AL592447.1-201ENST00000447592 540 ntBASIC0.08□□□□□ -2.4
HSPG2P98160 MTND2P24-201ENST00000453434 806 ntBASIC0.08□□□□□ -2.4
HSPG2P98160 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC0.08□□□□□ -2.4
HSPG2P98160 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC0.08□□□□□ -2.4
HSPG2P98160 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC0.08□□□□□ -2.4
HSPG2P98160 RPL30P11-203ENST00000598995 310 ntBASIC0.08□□□□□ -2.4
HSPG2P98160 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC0.08□□□□□ -2.4
HSPG2P98160 Z99571.1-201ENST00000636677 394 ntBASIC0.08□□□□□ -2.4
HSPG2P98160 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC0.08□□□□□ -2.4
HSPG2P98160 AC138393.1-203ENST00000327086 343 ntBASIC0.07□□□□□ -2.4
HSPG2P98160 SNORA32.3-201ENST00000384772 121 ntBASIC0.07□□□□□ -2.4
HSPG2P98160 MIR29C-201ENST00000385231 88 ntBASIC0.07□□□□□ -2.4
HSPG2P98160 MIR1295A-201ENST00000408463 79 ntBASIC0.07□□□□□ -2.4
HSPG2P98160 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC0.07□□□□□ -2.4
HSPG2P98160 HMGN3P1-201ENST00000453847 193 ntBASIC0.07□□□□□ -2.4
HSPG2P98160 RPS26P45-201ENST00000471748 340 ntBASIC0.07□□□□□ -2.4
HSPG2P98160 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC0.07□□□□□ -2.4
HSPG2P98160 AC022493.2-201ENST00000506122 481 ntBASIC0.07□□□□□ -2.4
HSPG2P98160 AC117525.1-201ENST00000515228 503 ntBASIC0.07□□□□□ -2.4
HSPG2P98160 Y_RNA.659-201ENST00000515994 113 ntBASIC0.07□□□□□ -2.4
HSPG2P98160 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC0.07□□□□□ -2.4
HSPG2P98160 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC0.07□□□□□ -2.4
HSPG2P98160 AC009712.1-201ENST00000564938 316 ntBASIC0.07□□□□□ -2.4
HSPG2P98160 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC0.07□□□□□ -2.4
HSPG2P98160 AC090330.1-201ENST00000588646 764 ntBASIC0.07□□□□□ -2.4
HSPG2P98160 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC0.07□□□□□ -2.4
HSPG2P98160 MIR200A-201ENST00000384875 90 ntBASIC0.07□□□□□ -2.4
HSPG2P98160 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC0.07□□□□□ -2.4
HSPG2P98160 AL135790.2-201ENST00000437701 267 ntBASIC0.07□□□□□ -2.4
HSPG2P98160 AC016717.1-201ENST00000448918 286 ntBASIC0.07□□□□□ -2.4
HSPG2P98160 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC0.07□□□□□ -2.4
HSPG2P98160 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC0.07□□□□□ -2.4
HSPG2P98160 RPS26P55-201ENST00000471178 356 ntBASIC0.07□□□□□ -2.4
HSPG2P98160 AC104057.1-201ENST00000515547 497 ntBASIC0.07□□□□□ -2.4
HSPG2P98160 SNORD19.2-201ENST00000516978 73 ntBASIC0.07□□□□□ -2.4
HSPG2P98160 DEFB108D-201ENST00000527787 222 ntBASIC0.07□□□□□ -2.4
HSPG2P98160 MDM2-232ENST00000544561 213 ntTSL 5 BASIC0.07□□□□□ -2.4
HSPG2P98160 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC0.07□□□□□ -2.4
HSPG2P98160 CYP3A52P-201ENST00000563326 91 ntBASIC0.07□□□□□ -2.4
HSPG2P98160 AC002545.1-201ENST00000592511 181 ntBASIC0.07□□□□□ -2.4
HSPG2P98160 AL022345.2-201ENST00000606307 135 ntBASIC0.07□□□□□ -2.4
HSPG2P98160 AC135803.1-201ENST00000608748 565 ntBASIC0.07□□□□□ -2.4
HSPG2P98160 AC110792.4-201ENST00000609843 298 ntBASIC0.07□□□□□ -2.4
HSPG2P98160 AL512506.2-201ENST00000624472 458 ntBASIC0.07□□□□□ -2.4
HSPG2P98160 MIR302D-201ENST00000362275 68 ntBASIC0.07□□□□□ -2.4
HSPG2P98160 SNORD115-3-201ENST00000363100 82 ntBASIC0.07□□□□□ -2.4
HSPG2P98160 RNU6-486P-201ENST00000363116 107 ntBASIC0.07□□□□□ -2.4
HSPG2P98160 RNU6-741P-201ENST00000383889 107 ntBASIC0.07□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms