Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 AC069282.1-201ENST00000411911 526 ntBASIC0.12□□□□□ -2.39
PRKDCP78527 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC0.12□□□□□ -2.39
PRKDCP78527 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC0.12□□□□□ -2.39
PRKDCP78527 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC0.12□□□□□ -2.39
PRKDCP78527 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC0.12□□□□□ -2.39
PRKDCP78527 MRPS17P3-201ENST00000465453 385 ntBASIC0.12□□□□□ -2.39
PRKDCP78527 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC0.12□□□□□ -2.39
PRKDCP78527 PTK2-220ENST00000520151 573 ntTSL 4 BASIC0.12□□□□□ -2.39
PRKDCP78527 HSPA8P13-201ENST00000523715 472 ntBASIC0.12□□□□□ -2.39
PRKDCP78527 DEFB108D-201ENST00000527787 222 ntBASIC0.12□□□□□ -2.39
PRKDCP78527 AL161729.4-201ENST00000604650 476 ntBASIC0.12□□□□□ -2.39
PRKDCP78527 AC017083.3-201ENST00000609955 700 ntBASIC0.12□□□□□ -2.39
PRKDCP78527 RNU4-9P-201ENST00000364951 139 ntBASIC0.12□□□□□ -2.39
PRKDCP78527 AC134050.1-201ENST00000495088 933 ntBASIC0.12□□□□□ -2.39
PRKDCP78527 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC0.12□□□□□ -2.39
PRKDCP78527 RNU6-27P-201ENST00000516146 107 ntBASIC0.12□□□□□ -2.39
PRKDCP78527 RNU7-40P-201ENST00000516397 64 ntBASIC0.12□□□□□ -2.39
PRKDCP78527 SNORA70.22-201ENST00000517160 124 ntBASIC0.12□□□□□ -2.39
PRKDCP78527 AC090142.3-201ENST00000519012 385 ntBASIC0.12□□□□□ -2.39
PRKDCP78527 AC002400.1-201ENST00000569310 726 ntBASIC0.12□□□□□ -2.39
PRKDCP78527 MIR3937-201ENST00000580135 106 ntBASIC0.12□□□□□ -2.39
PRKDCP78527 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC0.12□□□□□ -2.39
PRKDCP78527 AL158163.2-201ENST00000619110 700 ntBASIC0.12□□□□□ -2.39
PRKDCP78527 AC040168.1-201ENST00000623594 991 ntBASIC0.12□□□□□ -2.39
PRKDCP78527 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC0.12□□□□□ -2.39
PRKDCP78527 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC0.11□□□□□ -2.39
PRKDCP78527 Y_RNA.514-201ENST00000384528 112 ntBASIC0.11□□□□□ -2.39
PRKDCP78527 RNU6-1184P-201ENST00000384588 108 ntBASIC0.11□□□□□ -2.39
PRKDCP78527 MIR19B1-201ENST00000384829 87 ntBASIC0.11□□□□□ -2.39
PRKDCP78527 AC010099.3-201ENST00000423896 409 ntBASIC0.11□□□□□ -2.39
PRKDCP78527 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC0.11□□□□□ -2.39
PRKDCP78527 RPP40P1-201ENST00000426762 456 ntBASIC0.11□□□□□ -2.39
PRKDCP78527 AL669831.1-202ENST00000428504 417 ntBASIC0.11□□□□□ -2.39
PRKDCP78527 RPL36P19-201ENST00000430744 301 ntBASIC0.11□□□□□ -2.39
PRKDCP78527 AL133373.1-201ENST00000497098 94 ntBASIC0.11□□□□□ -2.39
PRKDCP78527 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC0.11□□□□□ -2.39
PRKDCP78527 AC004987.4-201ENST00000603383 338 ntBASIC0.11□□□□□ -2.39
PRKDCP78527 MIR29C-201ENST00000385231 88 ntBASIC0.11□□□□□ -2.39
PRKDCP78527 CCNG1P1-201ENST00000406783 885 ntBASIC0.11□□□□□ -2.39
PRKDCP78527 MTATP6P31-201ENST00000406985 692 ntBASIC0.11□□□□□ -2.39
PRKDCP78527 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC0.11□□□□□ -2.39
PRKDCP78527 RPL23AP54-201ENST00000495129 419 ntBASIC0.11□□□□□ -2.39
PRKDCP78527 AC145146.1-201ENST00000496370 254 ntBASIC0.11□□□□□ -2.39
PRKDCP78527 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC0.11□□□□□ -2.39
PRKDCP78527 RPL30P11-203ENST00000598995 310 ntBASIC0.11□□□□□ -2.39
PRKDCP78527 AL078604.3-201ENST00000615580 211 ntBASIC0.11□□□□□ -2.39
PRKDCP78527 FAS-AS1.2-201ENST00000620386 170 ntBASIC0.11□□□□□ -2.39
PRKDCP78527 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC0.11□□□□□ -2.39
PRKDCP78527 RNY4P24-201ENST00000362735 96 ntBASIC0.11□□□□□ -2.39
PRKDCP78527 RPL21P111-201ENST00000418453 477 ntBASIC0.11□□□□□ -2.39
PRKDCP78527 BPY2DP-201ENST00000422208 265 ntBASIC0.11□□□□□ -2.39
PRKDCP78527 ACA64.5-201ENST00000516207 127 ntBASIC0.11□□□□□ -2.39
PRKDCP78527 RN7SKP88-201ENST00000516847 250 ntBASIC0.11□□□□□ -2.39
PRKDCP78527 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC0.11□□□□□ -2.39
PRKDCP78527 AC021739.1-201ENST00000559631 174 ntBASIC0.11□□□□□ -2.39
PRKDCP78527 VN1R82P-201ENST00000601481 356 ntBASIC0.11□□□□□ -2.39
PRKDCP78527 FTX_3.1-201ENST00000610451 147 ntBASIC0.11□□□□□ -2.39
PRKDCP78527 7SK.8-201ENST00000612110 250 ntBASIC0.11□□□□□ -2.39
PRKDCP78527 7SK.11-201ENST00000615477 250 ntBASIC0.11□□□□□ -2.39
PRKDCP78527 7SK.13-201ENST00000622040 250 ntBASIC0.11□□□□□ -2.39
PRKDCP78527 AC130454.1-201ENST00000622948 401 ntBASIC0.11□□□□□ -2.39
PRKDCP78527 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC0.11□□□□□ -2.39
PRKDCP78527 RNU6-741P-201ENST00000383889 107 ntBASIC0.11□□□□□ -2.39
PRKDCP78527 SNORA32.3-201ENST00000384772 121 ntBASIC0.11□□□□□ -2.39
PRKDCP78527 MIR200A-201ENST00000384875 90 ntBASIC0.11□□□□□ -2.39
PRKDCP78527 MT-TQ-201ENST00000387372 72 ntBASIC0.11□□□□□ -2.39
PRKDCP78527 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC0.11□□□□□ -2.39
PRKDCP78527 RNU6-750P-201ENST00000390946 107 ntBASIC0.11□□□□□ -2.39
PRKDCP78527 MIR942-201ENST00000401111 86 ntBASIC0.11□□□□□ -2.39
PRKDCP78527 Y_RNA.700-201ENST00000516806 100 ntBASIC0.11□□□□□ -2.39
PRKDCP78527 MTCO2P2-201ENST00000591258 225 ntBASIC0.11□□□□□ -2.39
PRKDCP78527 AC025588.3-201ENST00000604182 274 ntBASIC0.11□□□□□ -2.39
PRKDCP78527 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC0.11□□□□□ -2.39
PRKDCP78527 AL159972.1-201ENST00000625150 448 ntBASIC0.11□□□□□ -2.39
PRKDCP78527 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC0.1□□□□□ -2.39
PRKDCP78527 MIR1207-201ENST00000408249 87 ntBASIC0.1□□□□□ -2.39
PRKDCP78527 HMGB1P36-201ENST00000487709 576 ntBASIC0.1□□□□□ -2.39
PRKDCP78527 RNU6-1256P-201ENST00000516539 103 ntBASIC0.1□□□□□ -2.39
PRKDCP78527 AC109329.1-201ENST00000518744 317 ntBASIC0.1□□□□□ -2.39
PRKDCP78527 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC0.1□□□□□ -2.39
PRKDCP78527 MIR4305-201ENST00000583252 102 ntBASIC0.1□□□□□ -2.39
PRKDCP78527 AL355802.4-201ENST00000607635 548 ntBASIC0.1□□□□□ -2.39
PRKDCP78527 AC110792.4-201ENST00000609843 298 ntBASIC0.1□□□□□ -2.39
PRKDCP78527 RNU6-514P-201ENST00000384208 107 ntBASIC0.1□□□□□ -2.39
PRKDCP78527 RNU6-160P-201ENST00000384591 107 ntBASIC0.1□□□□□ -2.39
PRKDCP78527 RN7SKP142-201ENST00000411236 328 ntBASIC0.1□□□□□ -2.39
PRKDCP78527 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC0.1□□□□□ -2.39
PRKDCP78527 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC0.1□□□□□ -2.39
PRKDCP78527 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC0.1□□□□□ -2.39
PRKDCP78527 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC0.1□□□□□ -2.39
PRKDCP78527 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC0.1□□□□□ -2.39
PRKDCP78527 RMST_4.1-201ENST00000616886 107 ntBASIC0.1□□□□□ -2.39
PRKDCP78527 AL391994.1-201ENST00000254724 282 ntBASIC0.1□□□□□ -2.39
PRKDCP78527 MIR424-201ENST00000362227 98 ntBASIC0.1□□□□□ -2.39
PRKDCP78527 Y_RNA.468-201ENST00000384298 102 ntBASIC0.1□□□□□ -2.39
PRKDCP78527 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC0.1□□□□□ -2.39
PRKDCP78527 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC0.1□□□□□ -2.39
PRKDCP78527 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC0.1□□□□□ -2.39
PRKDCP78527 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC0.1□□□□□ -2.39
PRKDCP78527 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC0.1□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 112.7 ms