Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.12□□□□□ -2.23
AP1S1P61966 RNU6-278P-201ENST00000390945 109 ntBASIC1.12□□□□□ -2.23
AP1S1P61966 ERHP2-201ENST00000402323 299 ntBASIC1.12□□□□□ -2.23
AP1S1P61966 RNU6-1025P-201ENST00000410629 104 ntBASIC1.12□□□□□ -2.23
AP1S1P61966 AC138623.1-201ENST00000418060 216 ntBASIC1.12□□□□□ -2.23
AP1S1P61966 snoU109.2-201ENST00000459316 135 ntBASIC1.12□□□□□ -2.23
AP1S1P61966 AC005908.1-201ENST00000468701 347 ntBASIC1.12□□□□□ -2.23
AP1S1P61966 AC099513.1-201ENST00000490423 301 ntBASIC1.12□□□□□ -2.23
AP1S1P61966 PTP4A1P4-201ENST00000512479 322 ntBASIC1.12□□□□□ -2.23
AP1S1P61966 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.12□□□□□ -2.23
AP1S1P61966 RNU6-965P-201ENST00000516721 96 ntBASIC1.12□□□□□ -2.23
AP1S1P61966 RNU6-914P-201ENST00000516749 109 ntBASIC1.12□□□□□ -2.23
AP1S1P61966 RNU6-143P-201ENST00000516942 93 ntBASIC1.12□□□□□ -2.23
AP1S1P61966 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC1.12□□□□□ -2.23
AP1S1P61966 AC092451.2-201ENST00000538746 658 ntBASIC1.12□□□□□ -2.23
AP1S1P61966 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC1.12□□□□□ -2.23
AP1S1P61966 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.12□□□□□ -2.23
AP1S1P61966 AC073410.2-201ENST00000603240 332 ntBASIC1.12□□□□□ -2.23
AP1S1P61966 AC091895.1-201ENST00000624494 256 ntBASIC1.12□□□□□ -2.23
AP1S1P61966 AC091965.5-201ENST00000624785 342 ntBASIC1.12□□□□□ -2.23
AP1S1P61966 AC090517.3-201ENST00000625170 141 ntBASIC1.12□□□□□ -2.23
AP1S1P61966 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.11□□□□□ -2.23
AP1S1P61966 RNU5A-8P-201ENST00000364102 114 ntBASIC1.11□□□□□ -2.23
AP1S1P61966 RNU6-413P-201ENST00000384115 107 ntBASIC1.11□□□□□ -2.23
AP1S1P61966 RNU2-36P-201ENST00000410361 191 ntBASIC1.11□□□□□ -2.23
AP1S1P61966 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.11□□□□□ -2.23
AP1S1P61966 UBE2V1P4-201ENST00000425374 344 ntBASIC1.11□□□□□ -2.23
AP1S1P61966 TXNL1P1-201ENST00000429528 554 ntBASIC1.11□□□□□ -2.23
AP1S1P61966 LARP1BP3-201ENST00000437229 869 ntBASIC1.11□□□□□ -2.23
AP1S1P61966 AL354941.1-201ENST00000438600 464 ntBASIC1.11□□□□□ -2.23
AP1S1P61966 AL590365.1-201ENST00000450788 243 ntBASIC1.11□□□□□ -2.23
AP1S1P61966 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC1.11□□□□□ -2.23
AP1S1P61966 MED28P2-201ENST00000475771 317 ntBASIC1.11□□□□□ -2.23
AP1S1P61966 AC116353.3-201ENST00000511215 249 ntBASIC1.11□□□□□ -2.23
AP1S1P61966 RNVU1-2-201ENST00000516326 135 ntBASIC1.11□□□□□ -2.23
AP1S1P61966 AP003168.1-201ENST00000530091 307 ntBASIC1.11□□□□□ -2.23
AP1S1P61966 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC1.11□□□□□ -2.23
AP1S1P61966 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC1.11□□□□□ -2.23
AP1S1P61966 MIR544B-201ENST00000582372 78 ntBASIC1.11□□□□□ -2.23
AP1S1P61966 MIR4295-201ENST00000585286 85 ntBASIC1.11□□□□□ -2.23
AP1S1P61966 AP001981.2-201ENST00000603241 418 ntBASIC1.11□□□□□ -2.23
AP1S1P61966 AC022893.3-201ENST00000607665 437 ntBASIC1.11□□□□□ -2.23
AP1S1P61966 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.11□□□□□ -2.23
AP1S1P61966 MTND5P42-201ENST00000637720 498 ntBASIC1.11□□□□□ -2.23
AP1S1P61966 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.1□□□□□ -2.23
AP1S1P61966 MIR337-201ENST00000362281 93 ntBASIC1.1□□□□□ -2.23
AP1S1P61966 RNU6-462P-201ENST00000362659 105 ntBASIC1.1□□□□□ -2.23
AP1S1P61966 RNU6-743P-201ENST00000364151 106 ntBASIC1.1□□□□□ -2.23
AP1S1P61966 SNORA25.8-201ENST00000364831 128 ntBASIC1.1□□□□□ -2.23
AP1S1P61966 SNORD14D-201ENST00000384390 87 ntBASIC1.1□□□□□ -2.23
AP1S1P61966 MIR618-201ENST00000385287 98 ntBASIC1.1□□□□□ -2.23
AP1S1P61966 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.1□□□□□ -2.23
AP1S1P61966 RNU6-817P-201ENST00000391083 104 ntBASIC1.1□□□□□ -2.23
AP1S1P61966 RNA5SP465-201ENST00000391195 109 ntBASIC1.1□□□□□ -2.23
AP1S1P61966 RNU2-41P-201ENST00000410991 178 ntBASIC1.1□□□□□ -2.23
AP1S1P61966 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC1.1□□□□□ -2.23
AP1S1P61966 AC019070.1-201ENST00000415008 1024 ntBASIC1.1□□□□□ -2.23
AP1S1P61966 SNRPEP10-201ENST00000420249 274 ntBASIC1.1□□□□□ -2.23
AP1S1P61966 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC1.1□□□□□ -2.23
AP1S1P61966 AL365400.1-201ENST00000431854 640 ntBASIC1.1□□□□□ -2.23
AP1S1P61966 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC1.1□□□□□ -2.23
AP1S1P61966 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC1.1□□□□□ -2.23
AP1S1P61966 TIMM9P1-201ENST00000436122 256 ntBASIC1.1□□□□□ -2.23
AP1S1P61966 MTCO2P20-201ENST00000437339 673 ntBASIC1.1□□□□□ -2.23
AP1S1P61966 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.1□□□□□ -2.23
AP1S1P61966 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.1□□□□□ -2.23
AP1S1P61966 AL606517.1-201ENST00000446914 387 ntBASIC1.1□□□□□ -2.23
AP1S1P61966 AC007327.1-201ENST00000447461 264 ntBASIC1.1□□□□□ -2.23
AP1S1P61966 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.1□□□□□ -2.23
AP1S1P61966 TOMM22P6-201ENST00000465035 409 ntBASIC1.1□□□□□ -2.23
AP1S1P61966 AC087343.1-201ENST00000477341 475 ntBASIC1.1□□□□□ -2.23
AP1S1P61966 AP001025.1-201ENST00000486139 332 ntBASIC1.1□□□□□ -2.23
AP1S1P61966 AC132942.1-201ENST00000486753 483 ntBASIC1.1□□□□□ -2.23
AP1S1P61966 AC109445.1-201ENST00000512356 383 ntBASIC1.1□□□□□ -2.23
AP1S1P61966 RNU6-1315P-201ENST00000517187 99 ntBASIC1.1□□□□□ -2.23
AP1S1P61966 AL356057.1-201ENST00000533798 831 ntBASIC1.1□□□□□ -2.23
AP1S1P61966 AC092325.1-201ENST00000566449 554 ntBASIC1.1□□□□□ -2.23
AP1S1P61966 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC1.1□□□□□ -2.23
AP1S1P61966 uc_338.15-201ENST00000615470 191 ntBASIC1.1□□□□□ -2.23
AP1S1P61966 AC092140.2-201ENST00000618027 521 ntBASIC1.1□□□□□ -2.23
AP1S1P61966 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.09□□□□□ -2.23
AP1S1P61966 RNU5E-1-201ENST00000362477 120 ntBASIC1.09□□□□□ -2.23
AP1S1P61966 RNU6-1010P-201ENST00000362757 107 ntBASIC1.09□□□□□ -2.23
AP1S1P61966 SNORD3E-201ENST00000362899 217 ntBASIC1.09□□□□□ -2.23
AP1S1P61966 RNU6-433P-201ENST00000363216 104 ntBASIC1.09□□□□□ -2.23
AP1S1P61966 RNU6-546P-201ENST00000383991 107 ntBASIC1.09□□□□□ -2.23
AP1S1P61966 RNU6-611P-201ENST00000384276 104 ntBASIC1.09□□□□□ -2.23
AP1S1P61966 RNU6-769P-201ENST00000384407 104 ntBASIC1.09□□□□□ -2.23
AP1S1P61966 MIR29C-201ENST00000385231 88 ntBASIC1.09□□□□□ -2.23
AP1S1P61966 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC1.09□□□□□ -2.23
AP1S1P61966 MIR1285-1-201ENST00000408593 84 ntBASIC1.09□□□□□ -2.23
AP1S1P61966 RNA5SP100-201ENST00000410903 110 ntBASIC1.09□□□□□ -2.23
AP1S1P61966 RNA5SP59-201ENST00000410922 110 ntBASIC1.09□□□□□ -2.23
AP1S1P61966 AL022400.1-201ENST00000423946 935 ntBASIC1.09□□□□□ -2.23
AP1S1P61966 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC1.09□□□□□ -2.23
AP1S1P61966 TOMM22P2-201ENST00000430735 237 ntBASIC1.09□□□□□ -2.23
AP1S1P61966 AL591704.1-201ENST00000432574 275 ntBASIC1.09□□□□□ -2.23
AP1S1P61966 AL591212.2-201ENST00000433923 257 ntBASIC1.09□□□□□ -2.23
AP1S1P61966 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.09□□□□□ -2.23
AP1S1P61966 CR769776.1-201ENST00000441254 787 ntBASIC1.09□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 153.6 ms