Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 FCF1P9-201ENST00000412546 282 ntBASIC2.78□□□□□ -1.96
RPS3AP61247 AC022018.1-201ENST00000430685 241 ntBASIC2.78□□□□□ -1.96
RPS3AP61247 ERLEC1P1-201ENST00000433806 578 ntBASIC2.78□□□□□ -1.96
RPS3AP61247 MTND1P4-201ENST00000435196 415 ntBASIC2.78□□□□□ -1.96
RPS3AP61247 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
RPS3AP61247 AC080013.2-201ENST00000460866 323 ntBASIC2.78□□□□□ -1.96
RPS3AP61247 AC133134.1-201ENST00000466800 359 ntBASIC2.78□□□□□ -1.96
RPS3AP61247 RPL23AP49-201ENST00000492925 468 ntBASIC2.78□□□□□ -1.96
RPS3AP61247 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.78□□□□□ -1.96
RPS3AP61247 NAF1-205ENST00000509434 385 ntTSL 3 BASIC2.78□□□□□ -1.96
RPS3AP61247 RNU6-377P-201ENST00000515965 102 ntBASIC2.78□□□□□ -1.96
RPS3AP61247 RNA5SP341-201ENST00000516261 117 ntBASIC2.78□□□□□ -1.96
RPS3AP61247 RNU6-1038P-201ENST00000516516 104 ntBASIC2.78□□□□□ -1.96
RPS3AP61247 MTND1P35-201ENST00000526739 508 ntBASIC2.78□□□□□ -1.96
RPS3AP61247 HSPE1P20-201ENST00000538133 289 ntBASIC2.78□□□□□ -1.96
RPS3AP61247 APAF1-207ENST00000547743 651 ntTSL 3 BASIC2.78□□□□□ -1.96
RPS3AP61247 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC2.78□□□□□ -1.96
RPS3AP61247 MIR3670-2-201ENST00000582974 65 ntBASIC2.78□□□□□ -1.96
RPS3AP61247 MIR3670-1-201ENST00000584160 65 ntBASIC2.78□□□□□ -1.96
RPS3AP61247 MIR3670-3-201ENST00000584855 65 ntBASIC2.78□□□□□ -1.96
RPS3AP61247 ATP1B3P1-201ENST00000605365 821 ntBASIC2.78□□□□□ -1.96
RPS3AP61247 AC092807.2-201ENST00000609367 243 ntBASIC2.78□□□□□ -1.96
RPS3AP61247 MIR3670-4-201ENST00000612260 65 ntBASIC2.78□□□□□ -1.96
RPS3AP61247 ATP5A1P2-202ENST00000616464 443 ntBASIC2.78□□□□□ -1.96
RPS3AP61247 AC091953.5-201ENST00000622919 233 ntBASIC2.78□□□□□ -1.96
RPS3AP61247 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC2.78□□□□□ -1.96
RPS3AP61247 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.78□□□□□ -1.96
RPS3AP61247 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.77□□□□□ -1.97
RPS3AP61247 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.77□□□□□ -1.97
RPS3AP61247 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.77□□□□□ -1.97
RPS3AP61247 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.77□□□□□ -1.97
RPS3AP61247 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.77□□□□□ -1.97
RPS3AP61247 MIR22-201ENST00000362190 85 ntBASIC2.77□□□□□ -1.97
RPS3AP61247 RNU6-1010P-201ENST00000362757 107 ntBASIC2.77□□□□□ -1.97
RPS3AP61247 RNU1-140P-201ENST00000365040 165 ntBASIC2.77□□□□□ -1.97
RPS3AP61247 RNU6-622P-201ENST00000384272 103 ntBASIC2.77□□□□□ -1.97
RPS3AP61247 MIR218-1-201ENST00000384999 110 ntBASIC2.77□□□□□ -1.97
RPS3AP61247 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
RPS3AP61247 SNORA48.5-201ENST00000391143 135 ntBASIC2.77□□□□□ -1.97
RPS3AP61247 MIR548F1-201ENST00000408667 84 ntBASIC2.77□□□□□ -1.97
RPS3AP61247 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.77□□□□□ -1.97
RPS3AP61247 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC2.77□□□□□ -1.97
RPS3AP61247 RPL30P4-201ENST00000429309 333 ntBASIC2.77□□□□□ -1.97
RPS3AP61247 AL591043.1-201ENST00000432461 424 ntBASIC2.77□□□□□ -1.97
RPS3AP61247 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC2.77□□□□□ -1.97
RPS3AP61247 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.77□□□□□ -1.97
RPS3AP61247 UBE2V1P8-201ENST00000437166 265 ntBASIC2.77□□□□□ -1.97
RPS3AP61247 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC2.77□□□□□ -1.97
RPS3AP61247 AC112771.1-201ENST00000463581 102 ntBASIC2.77□□□□□ -1.97
RPS3AP61247 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC2.77□□□□□ -1.97
RPS3AP61247 AP001025.1-201ENST00000486139 332 ntBASIC2.77□□□□□ -1.97
RPS3AP61247 AC096576.1-201ENST00000489014 359 ntBASIC2.77□□□□□ -1.97
RPS3AP61247 AC109329.1-201ENST00000518744 317 ntBASIC2.77□□□□□ -1.97
RPS3AP61247 COPS8P3-201ENST00000526024 482 ntBASIC2.77□□□□□ -1.97
RPS3AP61247 AC107016.2-201ENST00000547968 190 ntBASIC2.77□□□□□ -1.97
RPS3AP61247 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC2.77□□□□□ -1.97
RPS3AP61247 AC010525.2-201ENST00000590920 195 ntBASIC2.77□□□□□ -1.97
RPS3AP61247 AL160281.1-201ENST00000605307 311 ntBASIC2.77□□□□□ -1.97
RPS3AP61247 RNU6-89P-201ENST00000606519 100 ntBASIC2.77□□□□□ -1.97
RPS3AP61247 AC069294.1-201ENST00000608397 350 ntBASIC2.77□□□□□ -1.97
RPS3AP61247 AC024581.2-201ENST00000619986 252 ntBASIC2.77□□□□□ -1.97
RPS3AP61247 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC2.77□□□□□ -1.97
RPS3AP61247 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.77□□□□□ -1.97
RPS3AP61247 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC2.77□□□□□ -1.97
RPS3AP61247 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.77□□□□□ -1.97
RPS3AP61247 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
RPS3AP61247 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.76□□□□□ -1.97
RPS3AP61247 RNU6-527P-201ENST00000363425 104 ntBASIC2.76□□□□□ -1.97
RPS3AP61247 RNU6-525P-201ENST00000363685 104 ntBASIC2.76□□□□□ -1.97
RPS3AP61247 RNA5SP274-201ENST00000410484 108 ntBASIC2.76□□□□□ -1.97
RPS3AP61247 AC138623.1-201ENST00000418060 216 ntBASIC2.76□□□□□ -1.97
RPS3AP61247 EIF1P1-201ENST00000421436 341 ntBASIC2.76□□□□□ -1.97
RPS3AP61247 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC2.76□□□□□ -1.97
RPS3AP61247 NUP35P1-201ENST00000422734 947 ntBASIC2.76□□□□□ -1.97
RPS3AP61247 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC2.76□□□□□ -1.97
RPS3AP61247 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.76□□□□□ -1.97
RPS3AP61247 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC2.76□□□□□ -1.97
RPS3AP61247 EEF1B2P7-201ENST00000451177 676 ntBASIC2.76□□□□□ -1.97
RPS3AP61247 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.76□□□□□ -1.97
RPS3AP61247 RNU7-138P-201ENST00000459479 64 ntBASIC2.76□□□□□ -1.97
RPS3AP61247 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.76□□□□□ -1.97
RPS3AP61247 AC087884.1-201ENST00000469738 328 ntBASIC2.76□□□□□ -1.97
RPS3AP61247 AC090525.1-201ENST00000479116 478 ntBASIC2.76□□□□□ -1.97
RPS3AP61247 RN7SL20P-201ENST00000488827 297 ntBASIC2.76□□□□□ -1.97
RPS3AP61247 RN7SL633P-201ENST00000488974 297 ntBASIC2.76□□□□□ -1.97
RPS3AP61247 TBCAP3-201ENST00000512475 312 ntBASIC2.76□□□□□ -1.97
RPS3AP61247 CKS1BP7-201ENST00000522230 235 ntBASIC2.76□□□□□ -1.97
RPS3AP61247 AC078814.3-201ENST00000553036 491 ntBASIC2.76□□□□□ -1.97
RPS3AP61247 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC2.76□□□□□ -1.97
RPS3AP61247 MIR3200-201ENST00000580767 85 ntBASIC2.76□□□□□ -1.97
RPS3AP61247 AC090897.2-201ENST00000581715 130 ntBASIC2.76□□□□□ -1.97
RPS3AP61247 AC105245.1-201ENST00000581934 244 ntBASIC2.76□□□□□ -1.97
RPS3AP61247 AL449363.1-201ENST00000617815 186 ntBASIC2.76□□□□□ -1.97
RPS3AP61247 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.76□□□□□ -1.97
RPS3AP61247 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC2.75□□□□□ -1.97
RPS3AP61247 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
RPS3AP61247 AC121333.1-201ENST00000567488 2709 ntBASIC2.75□□□□□ -1.97
RPS3AP61247 OR56A5-201ENST00000340110 738 ntBASIC2.75□□□□□ -1.97
RPS3AP61247 SNORD56.1-201ENST00000362913 68 ntBASIC2.75□□□□□ -1.97
RPS3AP61247 Y_RNA.89-201ENST00000363031 102 ntBASIC2.75□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 133.5 ms