Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC2.23□□□□□ -2.05
SRP54P61011 AC018634.1-201ENST00000437554 401 ntBASIC2.23□□□□□ -2.05
SRP54P61011 IPO7P1-201ENST00000442031 636 ntBASIC2.23□□□□□ -2.05
SRP54P61011 AC010095.1-201ENST00000443543 144 ntBASIC2.23□□□□□ -2.05
SRP54P61011 AC096638.1-201ENST00000444678 216 ntBASIC2.23□□□□□ -2.05
SRP54P61011 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC2.23□□□□□ -2.05
SRP54P61011 AC022364.2-201ENST00000457963 554 ntBASIC2.23□□□□□ -2.05
SRP54P61011 MTCO3P28-201ENST00000513351 515 ntBASIC2.23□□□□□ -2.05
SRP54P61011 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC2.23□□□□□ -2.05
SRP54P61011 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC2.23□□□□□ -2.05
SRP54P61011 RNU1-86P-201ENST00000516108 154 ntBASIC2.23□□□□□ -2.05
SRP54P61011 RNU1-107P-201ENST00000516617 154 ntBASIC2.23□□□□□ -2.05
SRP54P61011 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.23□□□□□ -2.05
SRP54P61011 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC2.23□□□□□ -2.05
SRP54P61011 AC121247.2-201ENST00000604776 136 ntBASIC2.23□□□□□ -2.05
SRP54P61011 AC109347.2-201ENST00000610220 349 ntBASIC2.23□□□□□ -2.05
SRP54P61011 AC011155.2-201ENST00000623202 216 ntBASIC2.23□□□□□ -2.05
SRP54P61011 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
SRP54P61011 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.23□□□□□ -2.05
SRP54P61011 Y_RNA.201-201ENST00000364052 96 ntBASIC2.22□□□□□ -2.05
SRP54P61011 SNORA62.1-201ENST00000364287 154 ntBASIC2.22□□□□□ -2.05
SRP54P61011 MIR186-201ENST00000384988 86 ntBASIC2.22□□□□□ -2.05
SRP54P61011 MIR221-201ENST00000385135 110 ntBASIC2.22□□□□□ -2.05
SRP54P61011 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC2.22□□□□□ -2.05
SRP54P61011 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.22□□□□□ -2.05
SRP54P61011 AC133104.1-201ENST00000429100 218 ntBASIC2.22□□□□□ -2.05
SRP54P61011 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC2.22□□□□□ -2.05
SRP54P61011 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC2.22□□□□□ -2.05
SRP54P61011 AC000111.3-201ENST00000433478 193 ntBASIC2.22□□□□□ -2.05
SRP54P61011 AC009238.1-201ENST00000442165 424 ntBASIC2.22□□□□□ -2.05
SRP54P61011 AC009237.6-201ENST00000446969 424 ntBASIC2.22□□□□□ -2.05
SRP54P61011 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.22□□□□□ -2.05
SRP54P61011 RNU7-182P-201ENST00000459009 62 ntBASIC2.22□□□□□ -2.05
SRP54P61011 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC2.22□□□□□ -2.05
SRP54P61011 SNORA43.2-201ENST00000516652 128 ntBASIC2.22□□□□□ -2.05
SRP54P61011 SNORA31.23-201ENST00000517219 133 ntBASIC2.22□□□□□ -2.05
SRP54P61011 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.22□□□□□ -2.05
SRP54P61011 AC118273.2-201ENST00000532092 465 ntBASIC2.22□□□□□ -2.05
SRP54P61011 CYCSP26-201ENST00000534107 320 ntBASIC2.22□□□□□ -2.05
SRP54P61011 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.22□□□□□ -2.05
SRP54P61011 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC2.22□□□□□ -2.05
SRP54P61011 MIR4775-201ENST00000581168 75 ntBASIC2.22□□□□□ -2.05
SRP54P61011 AC104984.5-201ENST00000586878 94 ntBASIC2.22□□□□□ -2.05
SRP54P61011 AC098614.4-201ENST00000607601 462 ntBASIC2.22□□□□□ -2.05
SRP54P61011 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC2.22□□□□□ -2.05
SRP54P61011 MIR6715A-201ENST00000615929 79 ntBASIC2.22□□□□□ -2.05
SRP54P61011 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC2.22□□□□□ -2.05
SRP54P61011 AC026585.1-201ENST00000619582 524 ntBASIC2.22□□□□□ -2.05
SRP54P61011 MIR6766-201ENST00000622641 72 ntBASIC2.22□□□□□ -2.05
SRP54P61011 SEPT14P19-203ENST00000633205 211 ntBASIC2.22□□□□□ -2.05
SRP54P61011 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
SRP54P61011 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.22□□□□□ -2.05
SRP54P61011 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.22□□□□□ -2.05
SRP54P61011 RNU6-1287P-201ENST00000362914 107 ntBASIC2.21□□□□□ -2.06
SRP54P61011 RNU1-51P-201ENST00000365345 176 ntBASIC2.21□□□□□ -2.06
SRP54P61011 RNU6-116P-201ENST00000384042 109 ntBASIC2.21□□□□□ -2.06
SRP54P61011 RNU4-52P-201ENST00000384209 138 ntBASIC2.21□□□□□ -2.06
SRP54P61011 RNU6-1060P-201ENST00000384664 107 ntBASIC2.21□□□□□ -2.06
SRP54P61011 RNU6-550P-201ENST00000391057 101 ntBASIC2.21□□□□□ -2.06
SRP54P61011 AL591416.1-201ENST00000404015 867 ntBASIC2.21□□□□□ -2.06
SRP54P61011 RNA5SP390-201ENST00000410191 113 ntBASIC2.21□□□□□ -2.06
SRP54P61011 RNU6-607P-201ENST00000411283 108 ntBASIC2.21□□□□□ -2.06
SRP54P61011 PIGFP2-201ENST00000421400 651 ntBASIC2.21□□□□□ -2.06
SRP54P61011 PGBD4P6-201ENST00000421501 610 ntBASIC2.21□□□□□ -2.06
SRP54P61011 AC008267.5-201ENST00000424928 265 ntBASIC2.21□□□□□ -2.06
SRP54P61011 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC2.21□□□□□ -2.06
SRP54P61011 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC2.21□□□□□ -2.06
SRP54P61011 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.21□□□□□ -2.06
SRP54P61011 MTND1P27-201ENST00000451117 902 ntBASIC2.21□□□□□ -2.06
SRP54P61011 AP001025.1-201ENST00000486139 332 ntBASIC2.21□□□□□ -2.06
SRP54P61011 RPL9P6-201ENST00000492764 598 ntBASIC2.21□□□□□ -2.06
SRP54P61011 AC091965.2-201ENST00000512324 613 ntBASIC2.21□□□□□ -2.06
SRP54P61011 AC104136.1-201ENST00000512969 394 ntBASIC2.21□□□□□ -2.06
SRP54P61011 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC2.21□□□□□ -2.06
SRP54P61011 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC2.21□□□□□ -2.06
SRP54P61011 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC2.21□□□□□ -2.06
SRP54P61011 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC2.21□□□□□ -2.06
SRP54P61011 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC2.21□□□□□ -2.06
SRP54P61011 LRRC37A5P-203ENST00000580181 585 ntBASIC2.21□□□□□ -2.06
SRP54P61011 AC008088.1-201ENST00000580993 280 ntBASIC2.21□□□□□ -2.06
SRP54P61011 AC090897.2-201ENST00000581715 130 ntBASIC2.21□□□□□ -2.06
SRP54P61011 AC073539.2-201ENST00000597113 165 ntBASIC2.21□□□□□ -2.06
SRP54P61011 RPL30P11-203ENST00000598995 310 ntBASIC2.21□□□□□ -2.06
SRP54P61011 AC025165.5-201ENST00000602802 578 ntBASIC2.21□□□□□ -2.06
SRP54P61011 AL590229.1-201ENST00000603497 542 ntBASIC2.21□□□□□ -2.06
SRP54P61011 AL161423.1-201ENST00000613700 262 ntBASIC2.21□□□□□ -2.06
SRP54P61011 uc_338.15-201ENST00000615470 191 ntBASIC2.21□□□□□ -2.06
SRP54P61011 uc_338.11-201ENST00000619132 160 ntBASIC2.21□□□□□ -2.06
SRP54P61011 AC012640.5-201ENST00000623897 319 ntBASIC2.21□□□□□ -2.06
SRP54P61011 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC2.21□□□□□ -2.06
SRP54P61011 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
SRP54P61011 MIR561-201ENST00000385216 97 ntBASIC2.2□□□□□ -2.06
SRP54P61011 FGFR1OP2P1-201ENST00000395943 500 ntBASIC2.2□□□□□ -2.06
SRP54P61011 HMGB3P2-201ENST00000411913 584 ntBASIC2.2□□□□□ -2.06
SRP54P61011 OR9R1P-201ENST00000412200 877 ntBASIC2.2□□□□□ -2.06
SRP54P61011 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC2.2□□□□□ -2.06
SRP54P61011 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC2.2□□□□□ -2.06
SRP54P61011 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC2.2□□□□□ -2.06
SRP54P61011 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.2□□□□□ -2.06
SRP54P61011 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.2□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 124.5 ms