Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 AC123912.5-201ENST00000605470 343 ntBASIC1.25□□□□□ -2.21
ACTBP60709 AC091965.4-201ENST00000607691 587 ntBASIC1.25□□□□□ -2.21
ACTBP60709 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC1.25□□□□□ -2.21
ACTBP60709 uc_338.15-201ENST00000615470 191 ntBASIC1.25□□□□□ -2.21
ACTBP60709 uc_338.12-201ENST00000616344 181 ntBASIC1.25□□□□□ -2.21
ACTBP60709 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.25□□□□□ -2.21
ACTBP60709 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.25□□□□□ -2.21
ACTBP60709 RNU5E-6P-201ENST00000365574 115 ntBASIC1.24□□□□□ -2.21
ACTBP60709 RNU6-546P-201ENST00000383991 107 ntBASIC1.24□□□□□ -2.21
ACTBP60709 RNU6-939P-201ENST00000384634 107 ntBASIC1.24□□□□□ -2.21
ACTBP60709 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
ACTBP60709 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC1.24□□□□□ -2.21
ACTBP60709 snoU13.9-201ENST00000458927 103 ntBASIC1.24□□□□□ -2.21
ACTBP60709 SNORD13-201ENST00000459299 104 ntBASIC1.24□□□□□ -2.21
ACTBP60709 AP001025.1-201ENST00000486139 332 ntBASIC1.24□□□□□ -2.21
ACTBP60709 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC1.24□□□□□ -2.21
ACTBP60709 AC025465.3-201ENST00000510570 311 ntBASIC1.24□□□□□ -2.21
ACTBP60709 PTP4A1P4-201ENST00000512479 322 ntBASIC1.24□□□□□ -2.21
ACTBP60709 COPS8P3-201ENST00000526024 482 ntBASIC1.24□□□□□ -2.21
ACTBP60709 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC1.24□□□□□ -2.21
ACTBP60709 AC022616.8-201ENST00000533569 253 ntBASIC1.24□□□□□ -2.21
ACTBP60709 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC1.24□□□□□ -2.21
ACTBP60709 CR383656.8-201ENST00000549046 145 ntBASIC1.24□□□□□ -2.21
ACTBP60709 RRN3P3-201ENST00000549207 578 ntBASIC1.24□□□□□ -2.21
ACTBP60709 AC092325.1-201ENST00000566449 554 ntBASIC1.24□□□□□ -2.21
ACTBP60709 AC025678.1-201ENST00000567861 338 ntBASIC1.24□□□□□ -2.21
ACTBP60709 MIR3146-201ENST00000580367 79 ntBASIC1.24□□□□□ -2.21
ACTBP60709 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC1.24□□□□□ -2.21
ACTBP60709 AL391001.1-201ENST00000602747 715 ntBASIC1.24□□□□□ -2.21
ACTBP60709 BNIP3P10-201ENST00000605360 577 ntBASIC1.24□□□□□ -2.21
ACTBP60709 AC012360.2-201ENST00000609349 391 ntBASIC1.24□□□□□ -2.21
ACTBP60709 AC130324.3-201ENST00000614165 542 ntBASIC1.24□□□□□ -2.21
ACTBP60709 AL589994.2-201ENST00000621124 579 ntBASIC1.24□□□□□ -2.21
ACTBP60709 AL356596.1-201ENST00000624230 379 ntBASIC1.24□□□□□ -2.21
ACTBP60709 UGP2-231ENST00000627474 264 ntTSL 5 BASIC1.24□□□□□ -2.21
ACTBP60709 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.24□□□□□ -2.21
ACTBP60709 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.23□□□□□ -2.21
ACTBP60709 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
ACTBP60709 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC1.23□□□□□ -2.21
ACTBP60709 ELOCP17-201ENST00000414751 326 ntBASIC1.23□□□□□ -2.21
ACTBP60709 ELOCP9-201ENST00000418624 239 ntBASIC1.23□□□□□ -2.21
ACTBP60709 AL365338.1-201ENST00000422282 858 ntBASIC1.23□□□□□ -2.21
ACTBP60709 AL513185.2-201ENST00000425543 193 ntBASIC1.23□□□□□ -2.21
ACTBP60709 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC1.23□□□□□ -2.21
ACTBP60709 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
ACTBP60709 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC1.23□□□□□ -2.21
ACTBP60709 AC099513.1-201ENST00000490423 301 ntBASIC1.23□□□□□ -2.21
ACTBP60709 AC098862.1-201ENST00000504991 413 ntBASIC1.23□□□□□ -2.21
ACTBP60709 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC1.23□□□□□ -2.21
ACTBP60709 RNU6-1092P-201ENST00000516955 87 ntBASIC1.23□□□□□ -2.21
ACTBP60709 AC013828.2-201ENST00000532487 235 ntBASIC1.23□□□□□ -2.21
ACTBP60709 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.23□□□□□ -2.21
ACTBP60709 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC1.23□□□□□ -2.21
ACTBP60709 AC008269.2-201ENST00000561915 1105 ntBASIC1.23□□□□□ -2.21
ACTBP60709 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
ACTBP60709 AC080013.3-201ENST00000606839 578 ntBASIC1.23□□□□□ -2.21
ACTBP60709 MIR15A-201ENST00000607334 83 ntBASIC1.23□□□□□ -2.21
ACTBP60709 Z82243.1-201ENST00000609432 473 ntBASIC1.23□□□□□ -2.21
ACTBP60709 AC108747.1-201ENST00000609508 535 ntBASIC1.23□□□□□ -2.21
ACTBP60709 AC093648.1-201ENST00000623546 606 ntBASIC1.23□□□□□ -2.21
ACTBP60709 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC1.23□□□□□ -2.21
ACTBP60709 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
ACTBP60709 ZNF736P9Y-201ENST00000439586 1345 ntBASIC1.22□□□□□ -2.21
ACTBP60709 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
ACTBP60709 MIR26B-201ENST00000362251 77 ntBASIC1.22□□□□□ -2.21
ACTBP60709 Y_RNA.40-201ENST00000362645 93 ntBASIC1.22□□□□□ -2.21
ACTBP60709 RNY4P24-201ENST00000362735 96 ntBASIC1.22□□□□□ -2.21
ACTBP60709 RNY3P13-201ENST00000365542 102 ntBASIC1.22□□□□□ -2.21
ACTBP60709 RNU6-72P-201ENST00000384285 79 ntBASIC1.22□□□□□ -2.21
ACTBP60709 MIR597-201ENST00000384968 97 ntBASIC1.22□□□□□ -2.21
ACTBP60709 SNORA67.6-201ENST00000391093 99 ntBASIC1.22□□□□□ -2.21
ACTBP60709 CBX3P9-201ENST00000402326 552 ntBASIC1.22□□□□□ -2.21
ACTBP60709 RNU2-23P-201ENST00000410545 195 ntBASIC1.22□□□□□ -2.21
ACTBP60709 AC092809.3-201ENST00000415453 231 ntBASIC1.22□□□□□ -2.21
ACTBP60709 AC138623.1-201ENST00000418060 216 ntBASIC1.22□□□□□ -2.21
ACTBP60709 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC1.22□□□□□ -2.21
ACTBP60709 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC1.22□□□□□ -2.21
ACTBP60709 NDUFB1P2-201ENST00000449477 176 ntBASIC1.22□□□□□ -2.21
ACTBP60709 AL583843.1-201ENST00000456070 346 ntBASIC1.22□□□□□ -2.21
ACTBP60709 AL139824.2-201ENST00000458731 1095 ntBASIC1.22□□□□□ -2.21
ACTBP60709 HMGB1P30-201ENST00000492455 606 ntBASIC1.22□□□□□ -2.21
ACTBP60709 MTCYBP35-201ENST00000503630 1137 ntBASIC1.22□□□□□ -2.21
ACTBP60709 RNA5SP61-201ENST00000516453 100 ntBASIC1.22□□□□□ -2.21
ACTBP60709 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.22□□□□□ -2.21
ACTBP60709 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.22□□□□□ -2.21
ACTBP60709 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.22□□□□□ -2.21
ACTBP60709 MTCYBP33-201ENST00000575007 1130 ntBASIC1.22□□□□□ -2.21
ACTBP60709 WISP1-OT1-201ENST00000602893 642 ntBASIC1.22□□□□□ -2.21
ACTBP60709 AC144521.1-201ENST00000607148 956 ntBASIC1.22□□□□□ -2.21
ACTBP60709 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.22□□□□□ -2.21
ACTBP60709 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.22□□□□□ -2.21
ACTBP60709 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
ACTBP60709 RNU6-858P-201ENST00000362436 107 ntBASIC1.21□□□□□ -2.22
ACTBP60709 Y_RNA.46-201ENST00000362695 102 ntBASIC1.21□□□□□ -2.22
ACTBP60709 RNU6-655P-201ENST00000362858 107 ntBASIC1.21□□□□□ -2.22
ACTBP60709 RNU6-1210P-201ENST00000363775 107 ntBASIC1.21□□□□□ -2.22
ACTBP60709 RNU6-944P-201ENST00000364023 107 ntBASIC1.21□□□□□ -2.22
ACTBP60709 RNU6-960P-201ENST00000364056 120 ntBASIC1.21□□□□□ -2.22
ACTBP60709 MIR758-201ENST00000390227 88 ntBASIC1.21□□□□□ -2.22
ACTBP60709 SNORA48.1-201ENST00000390879 135 ntBASIC1.21□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 176.4 ms