Protein–RNA interactions for Protein: P60507

ERVFC1, Endogenous retrovirus group FC1 Env polyprotein, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1P60507 UTP23-205ENST00000520733 369 ntTSL 3 BASIC4.07□□□□□ -1.76
ERVFC1P60507 AC005476.1-201ENST00000554427 397 ntBASIC4.07□□□□□ -1.76
ERVFC1P60507 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC4.07□□□□□ -1.76
ERVFC1P60507 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.07□□□□□ -1.76
ERVFC1P60507 AC025946.2-201ENST00000603398 234 ntBASIC4.07□□□□□ -1.76
ERVFC1P60507 AL645944.1-201ENST00000603857 493 ntBASIC4.07□□□□□ -1.76
ERVFC1P60507 AC072026.1-201ENST00000605023 201 ntBASIC4.07□□□□□ -1.76
ERVFC1P60507 MIR7154-201ENST00000620673 73 ntBASIC4.07□□□□□ -1.76
ERVFC1P60507 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.07□□□□□ -1.76
ERVFC1P60507 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
ERVFC1P60507 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
ERVFC1P60507 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
ERVFC1P60507 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC4.07□□□□□ -1.76
ERVFC1P60507 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
ERVFC1P60507 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
ERVFC1P60507 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.07□□□□□ -1.76
ERVFC1P60507 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
ERVFC1P60507 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
ERVFC1P60507 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC4.06□□□□□ -1.76
ERVFC1P60507 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.06□□□□□ -1.76
ERVFC1P60507 Y_RNA.44-201ENST00000362676 108 ntBASIC4.06□□□□□ -1.76
ERVFC1P60507 RNU4-90P-201ENST00000362773 141 ntBASIC4.06□□□□□ -1.76
ERVFC1P60507 RNU6-227P-201ENST00000362865 103 ntBASIC4.06□□□□□ -1.76
ERVFC1P60507 Y_RNA.170-201ENST00000363746 110 ntBASIC4.06□□□□□ -1.76
ERVFC1P60507 RNU6-704P-201ENST00000364162 103 ntBASIC4.06□□□□□ -1.76
ERVFC1P60507 MIR218-2-201ENST00000385006 110 ntBASIC4.06□□□□□ -1.76
ERVFC1P60507 SNORD78.2-201ENST00000391076 69 ntBASIC4.06□□□□□ -1.76
ERVFC1P60507 Y_RNA.623-201ENST00000411128 95 ntBASIC4.06□□□□□ -1.76
ERVFC1P60507 RNA5SP39-201ENST00000411245 120 ntBASIC4.06□□□□□ -1.76
ERVFC1P60507 Y_RNA.626-201ENST00000411288 95 ntBASIC4.06□□□□□ -1.76
ERVFC1P60507 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC4.06□□□□□ -1.76
ERVFC1P60507 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC4.06□□□□□ -1.76
ERVFC1P60507 AL627311.1-201ENST00000431514 115 ntBASIC4.06□□□□□ -1.76
ERVFC1P60507 CKS1BP5-201ENST00000434172 273 ntBASIC4.06□□□□□ -1.76
ERVFC1P60507 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
ERVFC1P60507 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC4.06□□□□□ -1.76
ERVFC1P60507 CYCSP35-201ENST00000451978 304 ntBASIC4.06□□□□□ -1.76
ERVFC1P60507 FABP5P15-201ENST00000453566 214 ntBASIC4.06□□□□□ -1.76
ERVFC1P60507 HSPE1P25-201ENST00000455484 251 ntBASIC4.06□□□□□ -1.76
ERVFC1P60507 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC4.06□□□□□ -1.76
ERVFC1P60507 RPS29P26-201ENST00000477483 171 ntBASIC4.06□□□□□ -1.76
ERVFC1P60507 IGLV3-26-201ENST00000520756 302 ntBASIC4.06□□□□□ -1.76
ERVFC1P60507 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC4.06□□□□□ -1.76
ERVFC1P60507 AC069240.1-201ENST00000548774 375 ntBASIC4.06□□□□□ -1.76
ERVFC1P60507 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.06□□□□□ -1.76
ERVFC1P60507 AL121603.1-201ENST00000553815 142 ntBASIC4.06□□□□□ -1.76
ERVFC1P60507 AC090617.3-201ENST00000573670 475 ntBASIC4.06□□□□□ -1.76
ERVFC1P60507 MIR5195-201ENST00000583555 115 ntBASIC4.06□□□□□ -1.76
ERVFC1P60507 AC073657.2-201ENST00000605661 303 ntBASIC4.06□□□□□ -1.76
ERVFC1P60507 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC4.06□□□□□ -1.76
ERVFC1P60507 AC097372.5-201ENST00000623665 376 ntBASIC4.06□□□□□ -1.76
ERVFC1P60507 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
ERVFC1P60507 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.06□□□□□ -1.76
ERVFC1P60507 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
ERVFC1P60507 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.06□□□□□ -1.76
ERVFC1P60507 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.06□□□□□ -1.76
ERVFC1P60507 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
ERVFC1P60507 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
ERVFC1P60507 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
ERVFC1P60507 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
ERVFC1P60507 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC4.05□□□□□ -1.76
ERVFC1P60507 Y_RNA.504-201ENST00000384481 104 ntBASIC4.05□□□□□ -1.76
ERVFC1P60507 RNU6-102P-201ENST00000384485 104 ntBASIC4.05□□□□□ -1.76
ERVFC1P60507 RNU6-1081P-201ENST00000384537 107 ntBASIC4.05□□□□□ -1.76
ERVFC1P60507 MIR199A2-201ENST00000385289 110 ntBASIC4.05□□□□□ -1.76
ERVFC1P60507 AL033519.2-201ENST00000403958 392 ntBASIC4.05□□□□□ -1.76
ERVFC1P60507 Y_RNA.602-201ENST00000410535 92 ntBASIC4.05□□□□□ -1.76
ERVFC1P60507 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.05□□□□□ -1.76
ERVFC1P60507 HMGB1P37-201ENST00000439613 609 ntBASIC4.05□□□□□ -1.76
ERVFC1P60507 RPL7P47-201ENST00000497299 556 ntBASIC4.05□□□□□ -1.76
ERVFC1P60507 AK3P2-201ENST00000507976 429 ntBASIC4.05□□□□□ -1.76
ERVFC1P60507 IGKV2-38-201ENST00000517443 247 ntBASIC4.05□□□□□ -1.76
ERVFC1P60507 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.05□□□□□ -1.76
ERVFC1P60507 AC008121.1-201ENST00000603244 268 ntBASIC4.05□□□□□ -1.76
ERVFC1P60507 AC021753.1-201ENST00000635724 168 ntBASIC4.05□□□□□ -1.76
ERVFC1P60507 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
ERVFC1P60507 MFSD8-236ENST00000641509 4050 ntBASIC4.05□□□□□ -1.76
ERVFC1P60507 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
ERVFC1P60507 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
ERVFC1P60507 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
ERVFC1P60507 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.04□□□□□ -1.76
ERVFC1P60507 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
ERVFC1P60507 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
ERVFC1P60507 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
ERVFC1P60507 RNU6-1301P-201ENST00000362724 104 ntBASIC4.04□□□□□ -1.76
ERVFC1P60507 RNU6-326P-201ENST00000365480 107 ntBASIC4.04□□□□□ -1.76
ERVFC1P60507 RNU6-81P-201ENST00000365608 104 ntBASIC4.04□□□□□ -1.76
ERVFC1P60507 RNU6-937P-201ENST00000384325 106 ntBASIC4.04□□□□□ -1.76
ERVFC1P60507 MIR490-201ENST00000384865 128 ntBASIC4.04□□□□□ -1.76
ERVFC1P60507 MIR3074-201ENST00000384885 81 ntBASIC4.04□□□□□ -1.76
ERVFC1P60507 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC4.04□□□□□ -1.76
ERVFC1P60507 MTCO1P39-201ENST00000426148 480 ntBASIC4.04□□□□□ -1.76
ERVFC1P60507 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.04□□□□□ -1.76
ERVFC1P60507 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC4.04□□□□□ -1.76
ERVFC1P60507 U8.22-201ENST00000459141 133 ntBASIC4.04□□□□□ -1.76
ERVFC1P60507 RNU7-87P-201ENST00000459343 62 ntBASIC4.04□□□□□ -1.76
ERVFC1P60507 AC006517.1-201ENST00000480485 328 ntBASIC4.04□□□□□ -1.76
ERVFC1P60507 RNU6-1278P-201ENST00000516130 107 ntBASIC4.04□□□□□ -1.76
ERVFC1P60507 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC4.04□□□□□ -1.76
ERVFC1P60507 MIR4659A-201ENST00000580269 81 ntBASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 155 ms