Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.02□□□□□ -1.93
HDAC4P56524 RNU1-35P-201ENST00000362782 153 ntBASIC3.01□□□□□ -1.93
HDAC4P56524 RNU6-867P-201ENST00000364956 107 ntBASIC3.01□□□□□ -1.93
HDAC4P56524 Y_RNA.373-201ENST00000365600 103 ntBASIC3.01□□□□□ -1.93
HDAC4P56524 RNU4-26P-201ENST00000410270 107 ntBASIC3.01□□□□□ -1.93
HDAC4P56524 Y_RNA.623-201ENST00000411128 95 ntBASIC3.01□□□□□ -1.93
HDAC4P56524 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.01□□□□□ -1.93
HDAC4P56524 ARL5AP1-201ENST00000418991 388 ntBASIC3.01□□□□□ -1.93
HDAC4P56524 RPL7P37-201ENST00000425095 738 ntBASIC3.01□□□□□ -1.93
HDAC4P56524 RPS15AP5-201ENST00000436276 388 ntBASIC3.01□□□□□ -1.93
HDAC4P56524 RPS29P6-201ENST00000438196 145 ntBASIC3.01□□□□□ -1.93
HDAC4P56524 AC009296.1-201ENST00000443146 155 ntBASIC3.01□□□□□ -1.93
HDAC4P56524 RPL32P28-201ENST00000443577 397 ntBASIC3.01□□□□□ -1.93
HDAC4P56524 UBBP3-201ENST00000445497 241 ntBASIC3.01□□□□□ -1.93
HDAC4P56524 NDUFB1P2-201ENST00000449477 176 ntBASIC3.01□□□□□ -1.93
HDAC4P56524 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC3.01□□□□□ -1.93
HDAC4P56524 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.01□□□□□ -1.93
HDAC4P56524 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC3.01□□□□□ -1.93
HDAC4P56524 AC091951.2-201ENST00000500762 203 ntBASIC3.01□□□□□ -1.93
HDAC4P56524 AIG1P1-201ENST00000503376 148 ntBASIC3.01□□□□□ -1.93
HDAC4P56524 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.01□□□□□ -1.93
HDAC4P56524 AC025465.4-201ENST00000513422 638 ntBASIC3.01□□□□□ -1.93
HDAC4P56524 RNU6-189P-201ENST00000516120 101 ntBASIC3.01□□□□□ -1.93
HDAC4P56524 RNU6-1183P-201ENST00000517054 60 ntBASIC3.01□□□□□ -1.93
HDAC4P56524 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC3.01□□□□□ -1.93
HDAC4P56524 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.01□□□□□ -1.93
HDAC4P56524 AC107016.2-201ENST00000547968 190 ntBASIC3.01□□□□□ -1.93
HDAC4P56524 MIR3945-201ENST00000581853 98 ntBASIC3.01□□□□□ -1.93
HDAC4P56524 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.01□□□□□ -1.93
HDAC4P56524 AP000787.2-201ENST00000604432 568 ntBASIC3.01□□□□□ -1.93
HDAC4P56524 RMST_4.1-201ENST00000616886 107 ntBASIC3.01□□□□□ -1.93
HDAC4P56524 AC022306.2-201ENST00000617563 647 ntBASIC3.01□□□□□ -1.93
HDAC4P56524 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.01□□□□□ -1.93
HDAC4P56524 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
HDAC4P56524 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3□□□□□ -1.93
HDAC4P56524 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3□□□□□ -1.93
HDAC4P56524 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3□□□□□ -1.93
HDAC4P56524 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC3□□□□□ -1.93
HDAC4P56524 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC3□□□□□ -1.93
HDAC4P56524 Y_RNA.72-201ENST00000362894 103 ntBASIC3□□□□□ -1.93
HDAC4P56524 SNORD14B-201ENST00000364533 90 ntBASIC3□□□□□ -1.93
HDAC4P56524 RNU6-831P-201ENST00000384548 107 ntBASIC3□□□□□ -1.93
HDAC4P56524 AL513477.1-202ENST00000417061 214 ntBASIC3□□□□□ -1.93
HDAC4P56524 PDCL2P1-201ENST00000419302 352 ntBASIC3□□□□□ -1.93
HDAC4P56524 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC3□□□□□ -1.93
HDAC4P56524 AL358075.3-201ENST00000426289 226 ntBASIC3□□□□□ -1.93
HDAC4P56524 AL139132.1-201ENST00000431587 344 ntBASIC3□□□□□ -1.93
HDAC4P56524 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3□□□□□ -1.93
HDAC4P56524 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC3□□□□□ -1.93
HDAC4P56524 MTND3P10-201ENST00000450967 341 ntBASIC3□□□□□ -1.93
HDAC4P56524 AC011005.2-201ENST00000487324 359 ntBASIC3□□□□□ -1.93
HDAC4P56524 TBCAP3-201ENST00000512475 312 ntBASIC3□□□□□ -1.93
HDAC4P56524 BTF3P12-201ENST00000519620 469 ntBASIC3□□□□□ -1.93
HDAC4P56524 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC3□□□□□ -1.93
HDAC4P56524 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3□□□□□ -1.93
HDAC4P56524 CYCSP39-201ENST00000565821 309 ntBASIC3□□□□□ -1.93
HDAC4P56524 AC138761.3-201ENST00000579993 334 ntBASIC3□□□□□ -1.93
HDAC4P56524 AC002044.1-201ENST00000606707 158 ntBASIC3□□□□□ -1.93
HDAC4P56524 AC009248.2-201ENST00000619826 254 ntBASIC3□□□□□ -1.93
HDAC4P56524 AL031601.2-202ENST00000622650 282 ntBASIC3□□□□□ -1.93
HDAC4P56524 AC138915.1-201ENST00000565427 1685 ntBASIC3□□□□□ -1.93
HDAC4P56524 AC096644.4-201ENST00000563417 2912 ntBASIC3□□□□□ -1.93
HDAC4P56524 AC110491.1-201ENST00000562191 2010 ntBASIC3□□□□□ -1.93
HDAC4P56524 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3□□□□□ -1.93
HDAC4P56524 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.99□□□□□ -1.93
HDAC4P56524 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.99□□□□□ -1.93
HDAC4P56524 SNORA44-201ENST00000384584 132 ntBASIC2.99□□□□□ -1.93
HDAC4P56524 AL356057.2-201ENST00000403318 432 ntBASIC2.99□□□□□ -1.93
HDAC4P56524 RNU2-49P-201ENST00000410666 184 ntBASIC2.99□□□□□ -1.93
HDAC4P56524 AL451074.5-201ENST00000415894 435 ntBASIC2.99□□□□□ -1.93
HDAC4P56524 RPLP0P7-201ENST00000416050 667 ntBASIC2.99□□□□□ -1.93
HDAC4P56524 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC2.99□□□□□ -1.93
HDAC4P56524 BPY2DP-201ENST00000422208 265 ntBASIC2.99□□□□□ -1.93
HDAC4P56524 AL627311.1-201ENST00000431514 115 ntBASIC2.99□□□□□ -1.93
HDAC4P56524 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC2.99□□□□□ -1.93
HDAC4P56524 USP9YP8-201ENST00000441913 500 ntBASIC2.99□□□□□ -1.93
HDAC4P56524 MTND5P20-201ENST00000448677 143 ntBASIC2.99□□□□□ -1.93
HDAC4P56524 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC2.99□□□□□ -1.93
HDAC4P56524 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC2.99□□□□□ -1.93
HDAC4P56524 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC2.99□□□□□ -1.93
HDAC4P56524 AC007547.1-201ENST00000462177 490 ntBASIC2.99□□□□□ -1.93
HDAC4P56524 RPL31P41-201ENST00000477967 372 ntBASIC2.99□□□□□ -1.93
HDAC4P56524 AC083906.5-201ENST00000503722 328 ntBASIC2.99□□□□□ -1.93
HDAC4P56524 SEM1P1-201ENST00000506694 209 ntBASIC2.99□□□□□ -1.93
HDAC4P56524 HIGD1AP13-201ENST00000509878 289 ntBASIC2.99□□□□□ -1.93
HDAC4P56524 SCGB1D5P-201ENST00000515134 247 ntBASIC2.99□□□□□ -1.93
HDAC4P56524 SNORA14.1-201ENST00000516113 141 ntBASIC2.99□□□□□ -1.93
HDAC4P56524 MIR892C-201ENST00000516410 77 ntBASIC2.99□□□□□ -1.93
HDAC4P56524 RNU6-1069P-201ENST00000516612 133 ntBASIC2.99□□□□□ -1.93
HDAC4P56524 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC2.99□□□□□ -1.93
HDAC4P56524 SCOCP1-201ENST00000554676 349 ntBASIC2.99□□□□□ -1.93
HDAC4P56524 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.99□□□□□ -1.93
HDAC4P56524 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.99□□□□□ -1.93
HDAC4P56524 MIR3941-201ENST00000582572 103 ntBASIC2.99□□□□□ -1.93
HDAC4P56524 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC2.99□□□□□ -1.93
HDAC4P56524 AL645944.1-201ENST00000603857 493 ntBASIC2.99□□□□□ -1.93
HDAC4P56524 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.99□□□□□ -1.93
HDAC4P56524 AC009994.1-201ENST00000606889 253 ntBASIC2.99□□□□□ -1.93
HDAC4P56524 AL121757.2-201ENST00000611223 313 ntBASIC2.99□□□□□ -1.93
HDAC4P56524 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 143.9 ms