Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
GFRA1P56159 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
GFRA1P56159 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.68□□□□□ -1.82
GFRA1P56159 RNA5SP502-201ENST00000362694 119 ntBASIC3.68□□□□□ -1.82
GFRA1P56159 RNU6-1301P-201ENST00000362724 104 ntBASIC3.68□□□□□ -1.82
GFRA1P56159 RNA5SP513-201ENST00000364648 118 ntBASIC3.68□□□□□ -1.82
GFRA1P56159 Y_RNA.350-201ENST00000365409 98 ntBASIC3.68□□□□□ -1.82
GFRA1P56159 RNA5SP283-201ENST00000365604 119 ntBASIC3.68□□□□□ -1.82
GFRA1P56159 RNU6-622P-201ENST00000384272 103 ntBASIC3.68□□□□□ -1.82
GFRA1P56159 RNU6-19P-201ENST00000384718 107 ntBASIC3.68□□□□□ -1.82
GFRA1P56159 RNU1-139P-201ENST00000391307 165 ntBASIC3.68□□□□□ -1.82
GFRA1P56159 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC3.68□□□□□ -1.82
GFRA1P56159 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.68□□□□□ -1.82
GFRA1P56159 AC244670.1-201ENST00000436879 112 ntBASIC3.68□□□□□ -1.82
GFRA1P56159 AL162151.2-201ENST00000448875 158 ntBASIC3.68□□□□□ -1.82
GFRA1P56159 AL441985.1-201ENST00000457727 251 ntBASIC3.68□□□□□ -1.82
GFRA1P56159 SNORD127-201ENST00000458892 86 ntBASIC3.68□□□□□ -1.82
GFRA1P56159 SNRPGP3-201ENST00000469405 227 ntBASIC3.68□□□□□ -1.82
GFRA1P56159 AP000870.1-201ENST00000472927 406 ntBASIC3.68□□□□□ -1.82
GFRA1P56159 TRBVB-201ENST00000477100 408 ntBASIC3.68□□□□□ -1.82
GFRA1P56159 RPL29P14-201ENST00000495837 428 ntBASIC3.68□□□□□ -1.82
GFRA1P56159 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.68□□□□□ -1.82
GFRA1P56159 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC3.68□□□□□ -1.82
GFRA1P56159 RNU6-1114P-201ENST00000516022 107 ntBASIC3.68□□□□□ -1.82
GFRA1P56159 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC3.68□□□□□ -1.82
GFRA1P56159 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC3.68□□□□□ -1.82
GFRA1P56159 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
GFRA1P56159 AL359198.2-201ENST00000611836 194 ntBASIC3.68□□□□□ -1.82
GFRA1P56159 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.68□□□□□ -1.82
GFRA1P56159 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
GFRA1P56159 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
GFRA1P56159 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.68□□□□□ -1.82
GFRA1P56159 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
GFRA1P56159 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC3.68□□□□□ -1.82
GFRA1P56159 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
GFRA1P56159 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
GFRA1P56159 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.67□□□□□ -1.82
GFRA1P56159 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC3.67□□□□□ -1.82
GFRA1P56159 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
GFRA1P56159 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.67□□□□□ -1.82
GFRA1P56159 RNU6-1159P-201ENST00000362933 107 ntBASIC3.67□□□□□ -1.82
GFRA1P56159 RNU6-879P-201ENST00000364328 108 ntBASIC3.67□□□□□ -1.82
GFRA1P56159 Y_RNA.319-201ENST00000365138 92 ntBASIC3.67□□□□□ -1.82
GFRA1P56159 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.67□□□□□ -1.82
GFRA1P56159 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
GFRA1P56159 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.67□□□□□ -1.82
GFRA1P56159 RPS15AP7-201ENST00000439294 405 ntBASIC3.67□□□□□ -1.82
GFRA1P56159 RPL30P12-201ENST00000474666 353 ntBASIC3.67□□□□□ -1.82
GFRA1P56159 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC3.67□□□□□ -1.82
GFRA1P56159 BTF3L4P4-201ENST00000506381 449 ntBASIC3.67□□□□□ -1.82
GFRA1P56159 RNU7-143P-201ENST00000516781 65 ntBASIC3.67□□□□□ -1.82
GFRA1P56159 RNU6-1198P-201ENST00000516904 67 ntBASIC3.67□□□□□ -1.82
GFRA1P56159 RNU6-388P-201ENST00000517012 105 ntBASIC3.67□□□□□ -1.82
GFRA1P56159 RNU6-389P-201ENST00000517048 105 ntBASIC3.67□□□□□ -1.82
GFRA1P56159 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.67□□□□□ -1.82
GFRA1P56159 AC005357.1-201ENST00000588399 301 ntBASIC3.67□□□□□ -1.82
GFRA1P56159 AL138963.2-201ENST00000605137 226 ntBASIC3.67□□□□□ -1.82
GFRA1P56159 MIR376A1-201ENST00000616574 68 ntBASIC3.67□□□□□ -1.82
GFRA1P56159 AC002543.1-201ENST00000299783 1954 ntBASIC3.67□□□□□ -1.82
GFRA1P56159 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
GFRA1P56159 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
GFRA1P56159 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
GFRA1P56159 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
GFRA1P56159 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
GFRA1P56159 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.66□□□□□ -1.82
GFRA1P56159 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
GFRA1P56159 RNU6-212P-201ENST00000362642 104 ntBASIC3.66□□□□□ -1.82
GFRA1P56159 RNA5SP295-201ENST00000362655 121 ntBASIC3.66□□□□□ -1.82
GFRA1P56159 Y_RNA.105-201ENST00000363182 111 ntBASIC3.66□□□□□ -1.82
GFRA1P56159 RNU6-748P-201ENST00000384648 107 ntBASIC3.66□□□□□ -1.82
GFRA1P56159 PTMAP5-201ENST00000393073 333 ntBASIC3.66□□□□□ -1.82
GFRA1P56159 RNU6-628P-201ENST00000410675 107 ntBASIC3.66□□□□□ -1.82
GFRA1P56159 RNU2-38P-201ENST00000410856 79 ntBASIC3.66□□□□□ -1.82
GFRA1P56159 AC023141.4-201ENST00000412031 328 ntBASIC3.66□□□□□ -1.82
GFRA1P56159 RPL21P38-201ENST00000418090 167 ntBASIC3.66□□□□□ -1.82
GFRA1P56159 AC096920.1-201ENST00000423991 241 ntBASIC3.66□□□□□ -1.82
GFRA1P56159 AC016700.2-201ENST00000446011 156 ntBASIC3.66□□□□□ -1.82
GFRA1P56159 RPL39P38-201ENST00000467018 153 ntBASIC3.66□□□□□ -1.82
GFRA1P56159 AC020593.1-201ENST00000507399 299 ntBASIC3.66□□□□□ -1.82
GFRA1P56159 PPBPP1-201ENST00000510807 373 ntBASIC3.66□□□□□ -1.82
GFRA1P56159 RNU6-1012P-201ENST00000516606 109 ntBASIC3.66□□□□□ -1.82
GFRA1P56159 AC115990.1-201ENST00000526957 301 ntBASIC3.66□□□□□ -1.82
GFRA1P56159 CYP4A43P-201ENST00000568156 121 ntBASIC3.66□□□□□ -1.82
GFRA1P56159 AC025627.2-201ENST00000576220 160 ntBASIC3.66□□□□□ -1.82
GFRA1P56159 AC008785.1-201ENST00000624475 456 ntBASIC3.66□□□□□ -1.82
GFRA1P56159 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
GFRA1P56159 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
GFRA1P56159 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.65□□□□□ -1.82
GFRA1P56159 UBE3AP2-201ENST00000429033 2259 ntBASIC3.65□□□□□ -1.82
GFRA1P56159 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
GFRA1P56159 Y_RNA.14-201ENST00000362415 103 ntBASIC3.65□□□□□ -1.83
GFRA1P56159 RNU6-137P-201ENST00000363680 108 ntBASIC3.65□□□□□ -1.83
GFRA1P56159 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
GFRA1P56159 RNU6-121P-201ENST00000410525 99 ntBASIC3.65□□□□□ -1.83
GFRA1P56159 RNU2-49P-201ENST00000410666 184 ntBASIC3.65□□□□□ -1.83
GFRA1P56159 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.65□□□□□ -1.83
GFRA1P56159 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.65□□□□□ -1.83
GFRA1P56159 EIF1P2-201ENST00000428233 350 ntBASIC3.65□□□□□ -1.83
GFRA1P56159 AC006517.1-201ENST00000480485 328 ntBASIC3.65□□□□□ -1.83
GFRA1P56159 AC006499.6-201ENST00000511169 607 ntBASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms