Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 RPS6P15-201ENST00000431996 751 ntBASIC1.9□□□□□ -2.11
PKNOX1P55347 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC1.9□□□□□ -2.11
PKNOX1P55347 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC1.9□□□□□ -2.11
PKNOX1P55347 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC1.9□□□□□ -2.11
PKNOX1P55347 AL161788.1-201ENST00000441805 169 ntBASIC1.9□□□□□ -2.11
PKNOX1P55347 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC1.9□□□□□ -2.11
PKNOX1P55347 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC1.9□□□□□ -2.11
PKNOX1P55347 RNA5SP269-201ENST00000459032 137 ntBASIC1.9□□□□□ -2.11
PKNOX1P55347 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC1.9□□□□□ -2.11
PKNOX1P55347 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC1.9□□□□□ -2.11
PKNOX1P55347 RNU6-410P-201ENST00000517006 107 ntBASIC1.9□□□□□ -2.11
PKNOX1P55347 SNORA31.23-201ENST00000517219 133 ntBASIC1.9□□□□□ -2.11
PKNOX1P55347 SNORA31.25-201ENST00000517242 134 ntBASIC1.9□□□□□ -2.11
PKNOX1P55347 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC1.9□□□□□ -2.11
PKNOX1P55347 PSMA3P-201ENST00000555485 635 ntBASIC1.9□□□□□ -2.11
PKNOX1P55347 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC1.9□□□□□ -2.11
PKNOX1P55347 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC1.9□□□□□ -2.11
PKNOX1P55347 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC1.9□□□□□ -2.11
PKNOX1P55347 AC098848.2-201ENST00000588023 330 ntBASIC1.9□□□□□ -2.11
PKNOX1P55347 Z94722.1-201ENST00000604328 474 ntBASIC1.9□□□□□ -2.11
PKNOX1P55347 AC096772.1-201ENST00000609146 564 ntBASIC1.9□□□□□ -2.11
PKNOX1P55347 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC1.9□□□□□ -2.11
PKNOX1P55347 AP001486.3-201ENST00000615334 372 ntBASIC1.9□□□□□ -2.11
PKNOX1P55347 SCARNA4-202ENST00000625402 129 ntBASIC1.9□□□□□ -2.11
PKNOX1P55347 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC1.9□□□□□ -2.11
PKNOX1P55347 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC1.9□□□□□ -2.11
PKNOX1P55347 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
PKNOX1P55347 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC1.9□□□□□ -2.11
PKNOX1P55347 HAUS6P2-201ENST00000433254 2404 ntBASIC1.89□□□□□ -2.11
PKNOX1P55347 MTND5P17-201ENST00000418405 1603 ntBASIC1.89□□□□□ -2.11
PKNOX1P55347 U3.4-201ENST00000363352 213 ntBASIC1.89□□□□□ -2.11
PKNOX1P55347 RNU6-525P-201ENST00000363685 104 ntBASIC1.89□□□□□ -2.11
PKNOX1P55347 RNU6-487P-201ENST00000365430 104 ntBASIC1.89□□□□□ -2.11
PKNOX1P55347 RNU1-57P-201ENST00000384491 166 ntBASIC1.89□□□□□ -2.11
PKNOX1P55347 SNORD116-20-201ENST00000384529 92 ntBASIC1.89□□□□□ -2.11
PKNOX1P55347 UBE2V1P10-201ENST00000414685 269 ntBASIC1.89□□□□□ -2.11
PKNOX1P55347 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC1.89□□□□□ -2.11
PKNOX1P55347 AIMP1P2-201ENST00000425294 312 ntBASIC1.89□□□□□ -2.11
PKNOX1P55347 GPR143P-201ENST00000434155 205 ntBASIC1.89□□□□□ -2.11
PKNOX1P55347 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
PKNOX1P55347 AL031667.1-201ENST00000440222 725 ntBASIC1.89□□□□□ -2.11
PKNOX1P55347 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC1.89□□□□□ -2.11
PKNOX1P55347 AC096638.1-201ENST00000444678 216 ntBASIC1.89□□□□□ -2.11
PKNOX1P55347 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC1.89□□□□□ -2.11
PKNOX1P55347 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC1.89□□□□□ -2.11
PKNOX1P55347 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC1.89□□□□□ -2.11
PKNOX1P55347 RPL9P6-201ENST00000492764 598 ntBASIC1.89□□□□□ -2.11
PKNOX1P55347 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC1.89□□□□□ -2.11
PKNOX1P55347 AC104806.1-201ENST00000508720 308 ntBASIC1.89□□□□□ -2.11
PKNOX1P55347 MTND3P25-201ENST00000509243 135 ntBASIC1.89□□□□□ -2.11
PKNOX1P55347 AC091965.2-201ENST00000512324 613 ntBASIC1.89□□□□□ -2.11
PKNOX1P55347 SNORD27.1-201ENST00000516319 72 ntBASIC1.89□□□□□ -2.11
PKNOX1P55347 SNORA18.6-201ENST00000516792 115 ntBASIC1.89□□□□□ -2.11
PKNOX1P55347 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC1.89□□□□□ -2.11
PKNOX1P55347 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC1.89□□□□□ -2.11
PKNOX1P55347 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.89□□□□□ -2.11
PKNOX1P55347 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC1.89□□□□□ -2.11
PKNOX1P55347 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC1.89□□□□□ -2.11
PKNOX1P55347 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC1.89□□□□□ -2.11
PKNOX1P55347 CLIC4P2-201ENST00000601934 717 ntBASIC1.89□□□□□ -2.11
PKNOX1P55347 AC073410.2-201ENST00000603240 332 ntBASIC1.89□□□□□ -2.11
PKNOX1P55347 MIR98-201ENST00000606724 119 ntBASIC1.89□□□□□ -2.11
PKNOX1P55347 RMST_4.1-201ENST00000616886 107 ntBASIC1.89□□□□□ -2.11
PKNOX1P55347 AC011155.2-201ENST00000623202 216 ntBASIC1.89□□□□□ -2.11
PKNOX1P55347 AP000770.2-201ENST00000623694 100 ntBASIC1.89□□□□□ -2.11
PKNOX1P55347 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC1.89□□□□□ -2.11
PKNOX1P55347 IGHVIII-44-202ENST00000636235 289 ntBASIC1.89□□□□□ -2.11
PKNOX1P55347 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.89□□□□□ -2.11
PKNOX1P55347 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.89□□□□□ -2.11
PKNOX1P55347 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
PKNOX1P55347 Y_RNA.40-201ENST00000362645 93 ntBASIC1.88□□□□□ -2.11
PKNOX1P55347 RNU1-23P-201ENST00000363361 144 ntBASIC1.88□□□□□ -2.11
PKNOX1P55347 SNORA62.1-201ENST00000364287 154 ntBASIC1.88□□□□□ -2.11
PKNOX1P55347 RNU4-91P-201ENST00000364778 135 ntBASIC1.88□□□□□ -2.11
PKNOX1P55347 MIR1-2-201ENST00000384961 85 ntBASIC1.88□□□□□ -2.11
PKNOX1P55347 MIR186-201ENST00000384988 86 ntBASIC1.88□□□□□ -2.11
PKNOX1P55347 AL049545.1-201ENST00000401856 572 ntBASIC1.88□□□□□ -2.11
PKNOX1P55347 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.88□□□□□ -2.11
PKNOX1P55347 RNU2-3P-201ENST00000410144 191 ntBASIC1.88□□□□□ -2.11
PKNOX1P55347 RNA5SP425-201ENST00000410336 112 ntBASIC1.88□□□□□ -2.11
PKNOX1P55347 OR6C66P-201ENST00000414917 930 ntBASIC1.88□□□□□ -2.11
PKNOX1P55347 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC1.88□□□□□ -2.11
PKNOX1P55347 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1.88□□□□□ -2.11
PKNOX1P55347 MTND2P4-201ENST00000445034 1004 ntBASIC1.88□□□□□ -2.11
PKNOX1P55347 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC1.88□□□□□ -2.11
PKNOX1P55347 AC079781.2-201ENST00000446424 169 ntBASIC1.88□□□□□ -2.11
PKNOX1P55347 RPS27AP8-201ENST00000452665 445 ntBASIC1.88□□□□□ -2.11
PKNOX1P55347 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC1.88□□□□□ -2.11
PKNOX1P55347 AC055731.1-201ENST00000474387 401 ntBASIC1.88□□□□□ -2.11
PKNOX1P55347 AC018868.1-201ENST00000491307 315 ntBASIC1.88□□□□□ -2.11
PKNOX1P55347 MTCO3P9-201ENST00000506989 781 ntBASIC1.88□□□□□ -2.11
PKNOX1P55347 MTCO3P28-201ENST00000513351 515 ntBASIC1.88□□□□□ -2.11
PKNOX1P55347 SNORA43.2-201ENST00000516652 128 ntBASIC1.88□□□□□ -2.11
PKNOX1P55347 SNORA48.11-201ENST00000517015 89 ntBASIC1.88□□□□□ -2.11
PKNOX1P55347 RNU2-19P-201ENST00000517288 84 ntBASIC1.88□□□□□ -2.11
PKNOX1P55347 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.88□□□□□ -2.11
PKNOX1P55347 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC1.88□□□□□ -2.11
PKNOX1P55347 OR5AL2P-201ENST00000532185 920 ntBASIC1.88□□□□□ -2.11
PKNOX1P55347 BNIP3P6-201ENST00000549284 499 ntBASIC1.88□□□□□ -2.11
PKNOX1P55347 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 114.3 ms