Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 MTCYBP33-201ENST00000575007 1130 ntBASIC1.77□□□□□ -2.13
CDH6P55285 AC090897.2-201ENST00000581715 130 ntBASIC1.77□□□□□ -2.13
CDH6P55285 AL359999.1-201ENST00000604513 294 ntBASIC1.77□□□□□ -2.13
CDH6P55285 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC1.77□□□□□ -2.13
CDH6P55285 AC005858.4-201ENST00000623191 700 ntBASIC1.77□□□□□ -2.13
CDH6P55285 SCARNA4-202ENST00000625402 129 ntBASIC1.77□□□□□ -2.13
CDH6P55285 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.76□□□□□ -2.13
CDH6P55285 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.76□□□□□ -2.13
CDH6P55285 RNU6-655P-201ENST00000362858 107 ntBASIC1.76□□□□□ -2.13
CDH6P55285 SNORD14B-201ENST00000364533 90 ntBASIC1.76□□□□□ -2.13
CDH6P55285 RNU6-234P-201ENST00000365229 104 ntBASIC1.76□□□□□ -2.13
CDH6P55285 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.76□□□□□ -2.13
CDH6P55285 MIR10A-201ENST00000385043 110 ntBASIC1.76□□□□□ -2.13
CDH6P55285 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC1.76□□□□□ -2.13
CDH6P55285 AC244636.1-201ENST00000421152 228 ntBASIC1.76□□□□□ -2.13
CDH6P55285 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.76□□□□□ -2.13
CDH6P55285 AC119618.1-201ENST00000434191 222 ntBASIC1.76□□□□□ -2.13
CDH6P55285 MTCYBP39-201ENST00000437562 491 ntBASIC1.76□□□□□ -2.13
CDH6P55285 MTND2P29-201ENST00000438595 412 ntBASIC1.76□□□□□ -2.13
CDH6P55285 AC007677.1-201ENST00000445757 515 ntBASIC1.76□□□□□ -2.13
CDH6P55285 AC104058.1-201ENST00000448028 297 ntBASIC1.76□□□□□ -2.13
CDH6P55285 AC006026.2-201ENST00000457376 180 ntBASIC1.76□□□□□ -2.13
CDH6P55285 snoU109.2-201ENST00000459316 135 ntBASIC1.76□□□□□ -2.13
CDH6P55285 MTCO2P29-201ENST00000465212 189 ntBASIC1.76□□□□□ -2.13
CDH6P55285 AP000797.1-201ENST00000478870 387 ntBASIC1.76□□□□□ -2.13
CDH6P55285 MTND2P14-201ENST00000482139 351 ntBASIC1.76□□□□□ -2.13
CDH6P55285 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.76□□□□□ -2.13
CDH6P55285 SNORA31.23-201ENST00000517219 133 ntBASIC1.76□□□□□ -2.13
CDH6P55285 CYCSP27-201ENST00000527643 293 ntBASIC1.76□□□□□ -2.13
CDH6P55285 ADI1P3-201ENST00000549509 470 ntBASIC1.76□□□□□ -2.13
CDH6P55285 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC1.76□□□□□ -2.13
CDH6P55285 MIR3122-201ENST00000577243 73 ntBASIC1.76□□□□□ -2.13
CDH6P55285 MIR5697-201ENST00000578045 78 ntBASIC1.76□□□□□ -2.13
CDH6P55285 MIR548AC-201ENST00000585049 88 ntBASIC1.76□□□□□ -2.13
CDH6P55285 AC011494.1-201ENST00000596454 237 ntBASIC1.76□□□□□ -2.13
CDH6P55285 AP000240.1-201ENST00000609910 452 ntBASIC1.76□□□□□ -2.13
CDH6P55285 MIR8081-201ENST00000611533 95 ntBASIC1.76□□□□□ -2.13
CDH6P55285 AC090517.3-201ENST00000625170 141 ntBASIC1.76□□□□□ -2.13
CDH6P55285 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
CDH6P55285 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
CDH6P55285 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
CDH6P55285 RNU6-611P-201ENST00000384276 104 ntBASIC1.75□□□□□ -2.13
CDH6P55285 MIR1289-2-201ENST00000408360 111 ntBASIC1.75□□□□□ -2.13
CDH6P55285 RNU2-32P-201ENST00000411193 191 ntBASIC1.75□□□□□ -2.13
CDH6P55285 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC1.75□□□□□ -2.13
CDH6P55285 AL365400.1-201ENST00000431854 640 ntBASIC1.75□□□□□ -2.13
CDH6P55285 CALM1P1-201ENST00000442082 433 ntBASIC1.75□□□□□ -2.13
CDH6P55285 AL136380.1-201ENST00000447970 162 ntBASIC1.75□□□□□ -2.13
CDH6P55285 AC245102.2-201ENST00000448956 180 ntBASIC1.75□□□□□ -2.13
CDH6P55285 AC010587.1-201ENST00000505809 469 ntBASIC1.75□□□□□ -2.13
CDH6P55285 AC116337.1-201ENST00000509680 687 ntBASIC1.75□□□□□ -2.13
CDH6P55285 RNU6-250P-201ENST00000516958 103 ntBASIC1.75□□□□□ -2.13
CDH6P55285 AP005639.2-201ENST00000527592 928 ntBASIC1.75□□□□□ -2.13
CDH6P55285 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC1.75□□□□□ -2.13
CDH6P55285 MIR4255-201ENST00000579351 72 ntBASIC1.75□□□□□ -2.13
CDH6P55285 DEFB131E-202ENST00000602581 683 ntBASIC1.75□□□□□ -2.13
CDH6P55285 AL353778.1-201ENST00000603149 408 ntBASIC1.75□□□□□ -2.13
CDH6P55285 AL078605.1-201ENST00000603529 500 ntBASIC1.75□□□□□ -2.13
CDH6P55285 AL670379.2-201ENST00000604983 252 ntBASIC1.75□□□□□ -2.13
CDH6P55285 AL670379.4-201ENST00000605279 254 ntBASIC1.75□□□□□ -2.13
CDH6P55285 AC012409.4-201ENST00000612923 249 ntBASIC1.75□□□□□ -2.13
CDH6P55285 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC1.75□□□□□ -2.13
CDH6P55285 AL359314.1-201ENST00000616913 261 ntBASIC1.75□□□□□ -2.13
CDH6P55285 AC108479.2-201ENST00000617314 601 ntBASIC1.75□□□□□ -2.13
CDH6P55285 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC1.75□□□□□ -2.13
CDH6P55285 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.75□□□□□ -2.13
CDH6P55285 OR4G2P-201ENST00000328113 903 ntBASIC1.74□□□□□ -2.13
CDH6P55285 RNU5F-7P-201ENST00000363696 115 ntBASIC1.74□□□□□ -2.13
CDH6P55285 RNU6-1210P-201ENST00000363775 107 ntBASIC1.74□□□□□ -2.13
CDH6P55285 RNU4-28P-201ENST00000364739 141 ntBASIC1.74□□□□□ -2.13
CDH6P55285 RNU6-546P-201ENST00000383991 107 ntBASIC1.74□□□□□ -2.13
CDH6P55285 RNU6-39P-201ENST00000384344 107 ntBASIC1.74□□□□□ -2.13
CDH6P55285 SNORD116-20-201ENST00000384529 92 ntBASIC1.74□□□□□ -2.13
CDH6P55285 RNU6-1274P-201ENST00000384557 107 ntBASIC1.74□□□□□ -2.13
CDH6P55285 SNORA8-201ENST00000384574 139 ntBASIC1.74□□□□□ -2.13
CDH6P55285 RNA5SP390-201ENST00000410191 113 ntBASIC1.74□□□□□ -2.13
CDH6P55285 RNU2-48P-201ENST00000410694 191 ntBASIC1.74□□□□□ -2.13
CDH6P55285 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC1.74□□□□□ -2.13
CDH6P55285 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC1.74□□□□□ -2.13
CDH6P55285 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.74□□□□□ -2.13
CDH6P55285 ZNF114P1-201ENST00000453500 292 ntBASIC1.74□□□□□ -2.13
CDH6P55285 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC1.74□□□□□ -2.13
CDH6P55285 AL121594.1-201ENST00000475906 575 ntBASIC1.74□□□□□ -2.13
CDH6P55285 AP001025.1-201ENST00000486139 332 ntBASIC1.74□□□□□ -2.13
CDH6P55285 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.74□□□□□ -2.13
CDH6P55285 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC1.74□□□□□ -2.13
CDH6P55285 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC1.74□□□□□ -2.13
CDH6P55285 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.74□□□□□ -2.13
CDH6P55285 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.74□□□□□ -2.13
CDH6P55285 AL139286.2-201ENST00000606838 396 ntBASIC1.74□□□□□ -2.13
CDH6P55285 RNU6-87P-201ENST00000607561 108 ntBASIC1.74□□□□□ -2.13
CDH6P55285 AC024933.1-201ENST00000608472 348 ntBASIC1.74□□□□□ -2.13
CDH6P55285 AC093648.1-201ENST00000623546 606 ntBASIC1.74□□□□□ -2.13
CDH6P55285 AC068787.1-201ENST00000623908 691 ntBASIC1.74□□□□□ -2.13
CDH6P55285 AC006927.3-201ENST00000638789 384 ntBASIC1.74□□□□□ -2.13
CDH6P55285 FARSBP1-201ENST00000435808 1778 ntBASIC1.74□□□□□ -2.13
CDH6P55285 RNU6-500P-201ENST00000362349 107 ntBASIC1.73□□□□□ -2.13
CDH6P55285 RNU4-1-201ENST00000363925 141 ntBASIC1.73□□□□□ -2.13
CDH6P55285 RNA5SP465-201ENST00000391195 109 ntBASIC1.73□□□□□ -2.13
CDH6P55285 CISD1P1-201ENST00000393907 327 ntBASIC1.73□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms