Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC2.35□□□□□ -2.03
VCPP55072 RNU6-572P-201ENST00000516724 80 ntBASIC2.35□□□□□ -2.03
VCPP55072 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC2.35□□□□□ -2.03
VCPP55072 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC2.35□□□□□ -2.03
VCPP55072 AC006199.1-201ENST00000548728 219 ntBASIC2.35□□□□□ -2.03
VCPP55072 MIR4782-201ENST00000577987 79 ntBASIC2.35□□□□□ -2.03
VCPP55072 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC2.35□□□□□ -2.03
VCPP55072 AL670379.10-201ENST00000604330 253 ntBASIC2.35□□□□□ -2.03
VCPP55072 AL670379.2-201ENST00000604983 252 ntBASIC2.35□□□□□ -2.03
VCPP55072 AL670379.4-201ENST00000605279 254 ntBASIC2.35□□□□□ -2.03
VCPP55072 AL670379.9-201ENST00000605428 253 ntBASIC2.35□□□□□ -2.03
VCPP55072 AC126118.1-201ENST00000607744 628 ntBASIC2.35□□□□□ -2.03
VCPP55072 MIR6845-201ENST00000613182 61 ntBASIC2.35□□□□□ -2.03
VCPP55072 AC099842.1-201ENST00000619919 596 ntBASIC2.35□□□□□ -2.03
VCPP55072 AC024940.5-201ENST00000622889 474 ntBASIC2.35□□□□□ -2.03
VCPP55072 AC093648.1-201ENST00000623546 606 ntBASIC2.35□□□□□ -2.03
VCPP55072 AL157786.1-207ENST00000627771 695 ntBASIC2.35□□□□□ -2.03
VCPP55072 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC2.35□□□□□ -2.03
VCPP55072 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.35□□□□□ -2.03
VCPP55072 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
VCPP55072 AC092881.1-201ENST00000638218 2733 ntBASIC2.34□□□□□ -2.03
VCPP55072 MIRLET7G-201ENST00000362280 84 ntBASIC2.34□□□□□ -2.03
VCPP55072 RNU6-1097P-201ENST00000363586 107 ntBASIC2.34□□□□□ -2.03
VCPP55072 RNU6-282P-201ENST00000365357 103 ntBASIC2.34□□□□□ -2.03
VCPP55072 Y_RNA.367-201ENST00000365544 101 ntBASIC2.34□□□□□ -2.03
VCPP55072 Z98749.2-208ENST00000381646 500 ntBASIC2.34□□□□□ -2.03
VCPP55072 RNU6-74P-201ENST00000384235 107 ntBASIC2.34□□□□□ -2.03
VCPP55072 MIR221-201ENST00000385135 110 ntBASIC2.34□□□□□ -2.03
VCPP55072 CISD1P1-201ENST00000393907 327 ntBASIC2.34□□□□□ -2.03
VCPP55072 SNORD23.1-201ENST00000408212 104 ntBASIC2.34□□□□□ -2.03
VCPP55072 OR51A5P-201ENST00000415429 942 ntBASIC2.34□□□□□ -2.03
VCPP55072 AL160275.3-201ENST00000423876 471 ntBASIC2.34□□□□□ -2.03
VCPP55072 AC133104.1-201ENST00000429100 218 ntBASIC2.34□□□□□ -2.03
VCPP55072 RPL30P4-201ENST00000429309 333 ntBASIC2.34□□□□□ -2.03
VCPP55072 WARS2P1-201ENST00000429678 537 ntBASIC2.34□□□□□ -2.03
VCPP55072 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC2.34□□□□□ -2.03
VCPP55072 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC2.34□□□□□ -2.03
VCPP55072 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.34□□□□□ -2.03
VCPP55072 NDUFA5P4-201ENST00000436704 385 ntBASIC2.34□□□□□ -2.03
VCPP55072 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC2.34□□□□□ -2.03
VCPP55072 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC2.34□□□□□ -2.03
VCPP55072 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.34□□□□□ -2.03
VCPP55072 RBBP4P6-201ENST00000508098 202 ntBASIC2.34□□□□□ -2.03
VCPP55072 RNU6-430P-201ENST00000517078 107 ntBASIC2.34□□□□□ -2.03
VCPP55072 SNORA31.19-201ENST00000517079 126 ntBASIC2.34□□□□□ -2.03
VCPP55072 MTCO2P4-201ENST00000517968 247 ntBASIC2.34□□□□□ -2.03
VCPP55072 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC2.34□□□□□ -2.03
VCPP55072 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.34□□□□□ -2.03
VCPP55072 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC2.34□□□□□ -2.03
VCPP55072 MIR4765-201ENST00000585007 77 ntBASIC2.34□□□□□ -2.03
VCPP55072 AC008521.1-201ENST00000587471 187 ntBASIC2.34□□□□□ -2.03
VCPP55072 AC069294.1-201ENST00000608397 350 ntBASIC2.34□□□□□ -2.03
VCPP55072 AC009509.4-201ENST00000619202 509 ntBASIC2.34□□□□□ -2.03
VCPP55072 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC2.34□□□□□ -2.04
VCPP55072 MTND5P30-201ENST00000452896 1731 ntBASIC2.34□□□□□ -2.04
VCPP55072 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.33□□□□□ -2.04
VCPP55072 MTND5P17-201ENST00000418405 1603 ntBASIC2.33□□□□□ -2.04
VCPP55072 RNU6-181P-201ENST00000363225 107 ntBASIC2.33□□□□□ -2.04
VCPP55072 RNU6-395P-201ENST00000365662 106 ntBASIC2.33□□□□□ -2.04
VCPP55072 SNORA17.3-201ENST00000391159 129 ntBASIC2.33□□□□□ -2.04
VCPP55072 SNORA40C-201ENST00000391285 128 ntBASIC2.33□□□□□ -2.04
VCPP55072 RNU6-321P-201ENST00000410912 106 ntBASIC2.33□□□□□ -2.04
VCPP55072 CDK8P2-201ENST00000415020 547 ntBASIC2.33□□□□□ -2.04
VCPP55072 EIF4EP4-201ENST00000424916 578 ntBASIC2.33□□□□□ -2.04
VCPP55072 AC003071.1-201ENST00000451219 789 ntBASIC2.33□□□□□ -2.04
VCPP55072 AC104435.1-201ENST00000483483 166 ntBASIC2.33□□□□□ -2.04
VCPP55072 LAMTOR3P2-201ENST00000504479 232 ntBASIC2.33□□□□□ -2.04
VCPP55072 FAM92A1P2-202ENST00000504766 877 ntBASIC2.33□□□□□ -2.04
VCPP55072 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC2.33□□□□□ -2.04
VCPP55072 AC079140.3-201ENST00000511111 550 ntBASIC2.33□□□□□ -2.04
VCPP55072 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC2.33□□□□□ -2.04
VCPP55072 RNU6-445P-201ENST00000516949 107 ntBASIC2.33□□□□□ -2.04
VCPP55072 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC2.33□□□□□ -2.04
VCPP55072 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC2.33□□□□□ -2.04
VCPP55072 GNAI2P1-201ENST00000541815 315 ntBASIC2.33□□□□□ -2.04
VCPP55072 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC2.33□□□□□ -2.04
VCPP55072 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC2.33□□□□□ -2.04
VCPP55072 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.33□□□□□ -2.04
VCPP55072 NBR2-204ENST00000587322 63 ntBASIC2.33□□□□□ -2.04
VCPP55072 AC068790.2-201ENST00000602601 557 ntBASIC2.33□□□□□ -2.04
VCPP55072 AL022154.1-201ENST00000604698 785 ntBASIC2.33□□□□□ -2.04
VCPP55072 Z84480.1-201ENST00000605131 311 ntBASIC2.33□□□□□ -2.04
VCPP55072 AC009090.3-201ENST00000616553 565 ntBASIC2.33□□□□□ -2.04
VCPP55072 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
VCPP55072 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
VCPP55072 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
VCPP55072 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.32□□□□□ -2.04
VCPP55072 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
VCPP55072 CKAP2P1-201ENST00000555477 2049 ntBASIC2.32□□□□□ -2.04
VCPP55072 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.32□□□□□ -2.04
VCPP55072 Y_RNA.122-201ENST00000363331 96 ntBASIC2.32□□□□□ -2.04
VCPP55072 Y_RNA.359-201ENST00000365498 102 ntBASIC2.32□□□□□ -2.04
VCPP55072 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
VCPP55072 MIR1-2-201ENST00000384961 85 ntBASIC2.32□□□□□ -2.04
VCPP55072 FGFR1OP2P1-201ENST00000395943 500 ntBASIC2.32□□□□□ -2.04
VCPP55072 RNU6-387P-201ENST00000411331 105 ntBASIC2.32□□□□□ -2.04
VCPP55072 USP9YP6-201ENST00000413550 854 ntBASIC2.32□□□□□ -2.04
VCPP55072 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.32□□□□□ -2.04
VCPP55072 AL358934.1-201ENST00000432346 324 ntBASIC2.32□□□□□ -2.04
VCPP55072 MTND4P32-201ENST00000437189 1237 ntBASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 119.5 ms