Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC2.35□□□□□ -2.03
HMGCS2P54868 RNU6-703P-201ENST00000516946 107 ntBASIC2.35□□□□□ -2.03
HMGCS2P54868 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.35□□□□□ -2.03
HMGCS2P54868 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC2.35□□□□□ -2.03
HMGCS2P54868 AP005435.4-201ENST00000529514 284 ntBASIC2.35□□□□□ -2.03
HMGCS2P54868 OR4R1P-201ENST00000529879 463 ntBASIC2.35□□□□□ -2.03
HMGCS2P54868 AC016957.1-201ENST00000534895 309 ntBASIC2.35□□□□□ -2.03
HMGCS2P54868 ADI1P3-201ENST00000549509 470 ntBASIC2.35□□□□□ -2.03
HMGCS2P54868 AC110588.1-201ENST00000559699 137 ntBASIC2.35□□□□□ -2.03
HMGCS2P54868 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC2.35□□□□□ -2.03
HMGCS2P54868 AP001330.5-201ENST00000607176 411 ntBASIC2.35□□□□□ -2.03
HMGCS2P54868 AC126118.1-201ENST00000607744 628 ntBASIC2.35□□□□□ -2.03
HMGCS2P54868 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC2.35□□□□□ -2.03
HMGCS2P54868 AC013562.2-201ENST00000611632 603 ntBASIC2.35□□□□□ -2.03
HMGCS2P54868 AC084782.3-201ENST00000612282 578 ntBASIC2.35□□□□□ -2.03
HMGCS2P54868 DUSP12P1-201ENST00000612874 516 ntBASIC2.35□□□□□ -2.03
HMGCS2P54868 AL359547.2-201ENST00000615810 418 ntBASIC2.35□□□□□ -2.03
HMGCS2P54868 AL359880.1-201ENST00000621879 266 ntBASIC2.35□□□□□ -2.03
HMGCS2P54868 ATM-228ENST00000639240 498 ntTSL 5 BASIC2.35□□□□□ -2.03
HMGCS2P54868 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
HMGCS2P54868 ZNF355P-201ENST00000427301 3216 ntBASIC2.34□□□□□ -2.03
HMGCS2P54868 AL139276.1-201ENST00000311910 1001 ntBASIC2.34□□□□□ -2.03
HMGCS2P54868 RNU6-1029P-201ENST00000384109 107 ntBASIC2.34□□□□□ -2.03
HMGCS2P54868 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
HMGCS2P54868 RNU6-780P-201ENST00000391030 104 ntBASIC2.34□□□□□ -2.03
HMGCS2P54868 CISD1P1-201ENST00000393907 327 ntBASIC2.34□□□□□ -2.03
HMGCS2P54868 MIR888-201ENST00000401186 77 ntBASIC2.34□□□□□ -2.03
HMGCS2P54868 RNA5SP181-201ENST00000410246 98 ntBASIC2.34□□□□□ -2.03
HMGCS2P54868 RNU2-68P-201ENST00000410878 191 ntBASIC2.34□□□□□ -2.03
HMGCS2P54868 EEF1A1P40-201ENST00000412883 573 ntBASIC2.34□□□□□ -2.03
HMGCS2P54868 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC2.34□□□□□ -2.03
HMGCS2P54868 AL160275.3-201ENST00000423876 471 ntBASIC2.34□□□□□ -2.03
HMGCS2P54868 AC027124.2-201ENST00000428249 105 ntBASIC2.34□□□□□ -2.03
HMGCS2P54868 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC2.34□□□□□ -2.03
HMGCS2P54868 AL356010.1-201ENST00000456364 102 ntBASIC2.34□□□□□ -2.03
HMGCS2P54868 RNU7-182P-201ENST00000459009 62 ntBASIC2.34□□□□□ -2.03
HMGCS2P54868 AC079382.1-201ENST00000493346 557 ntBASIC2.34□□□□□ -2.03
HMGCS2P54868 AC019235.1-201ENST00000503847 207 ntBASIC2.34□□□□□ -2.03
HMGCS2P54868 AC104806.1-201ENST00000508720 308 ntBASIC2.34□□□□□ -2.03
HMGCS2P54868 RNU6-506P-201ENST00000516553 94 ntBASIC2.34□□□□□ -2.03
HMGCS2P54868 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC2.34□□□□□ -2.03
HMGCS2P54868 AP001893.2-201ENST00000526949 202 ntBASIC2.34□□□□□ -2.03
HMGCS2P54868 AP003034.1-201ENST00000534621 422 ntBASIC2.34□□□□□ -2.03
HMGCS2P54868 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC2.34□□□□□ -2.03
HMGCS2P54868 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.34□□□□□ -2.03
HMGCS2P54868 MIR3117-201ENST00000584034 78 ntBASIC2.34□□□□□ -2.03
HMGCS2P54868 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.34□□□□□ -2.03
HMGCS2P54868 MTND4LP5-201ENST00000605152 292 ntBASIC2.34□□□□□ -2.03
HMGCS2P54868 AL158032.1-201ENST00000605401 106 ntBASIC2.34□□□□□ -2.03
HMGCS2P54868 AC012557.2-201ENST00000605919 418 ntBASIC2.34□□□□□ -2.03
HMGCS2P54868 AP001596.2-201ENST00000608410 312 ntBASIC2.34□□□□□ -2.03
HMGCS2P54868 SEPT14P19-203ENST00000633205 211 ntBASIC2.34□□□□□ -2.03
HMGCS2P54868 AL512643.1-201ENST00000635735 524 ntBASIC2.34□□□□□ -2.03
HMGCS2P54868 AC080100.1-201ENST00000624239 5356 ntBASIC2.34□□□□□ -2.04
HMGCS2P54868 CKAP2P1-201ENST00000555477 2049 ntBASIC2.34□□□□□ -2.04
HMGCS2P54868 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
HMGCS2P54868 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
HMGCS2P54868 RNU6-1215P-201ENST00000384441 102 ntBASIC2.33□□□□□ -2.04
HMGCS2P54868 SUMO1P4-201ENST00000429430 302 ntBASIC2.33□□□□□ -2.04
HMGCS2P54868 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC2.33□□□□□ -2.04
HMGCS2P54868 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.33□□□□□ -2.04
HMGCS2P54868 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.33□□□□□ -2.04
HMGCS2P54868 DPPA3P1-201ENST00000448050 469 ntBASIC2.33□□□□□ -2.04
HMGCS2P54868 MTND1P18-201ENST00000448191 573 ntBASIC2.33□□□□□ -2.04
HMGCS2P54868 PSPHP1-201ENST00000450062 261 ntBASIC2.33□□□□□ -2.04
HMGCS2P54868 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC2.33□□□□□ -2.04
HMGCS2P54868 RPL26P9-201ENST00000457466 433 ntBASIC2.33□□□□□ -2.04
HMGCS2P54868 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC2.33□□□□□ -2.04
HMGCS2P54868 AC006512.1-201ENST00000468816 291 ntBASIC2.33□□□□□ -2.04
HMGCS2P54868 RPS27AP10-201ENST00000496103 208 ntBASIC2.33□□□□□ -2.04
HMGCS2P54868 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC2.33□□□□□ -2.04
HMGCS2P54868 MTCO3P9-201ENST00000506989 781 ntBASIC2.33□□□□□ -2.04
HMGCS2P54868 RNU6-1315P-201ENST00000517187 99 ntBASIC2.33□□□□□ -2.04
HMGCS2P54868 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC2.33□□□□□ -2.04
HMGCS2P54868 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC2.33□□□□□ -2.04
HMGCS2P54868 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC2.33□□□□□ -2.04
HMGCS2P54868 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.33□□□□□ -2.04
HMGCS2P54868 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC2.33□□□□□ -2.04
HMGCS2P54868 AC104383.1-201ENST00000530297 370 ntBASIC2.33□□□□□ -2.04
HMGCS2P54868 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.33□□□□□ -2.04
HMGCS2P54868 MIR1273C-201ENST00000578669 77 ntBASIC2.33□□□□□ -2.04
HMGCS2P54868 MTATP6P3-201ENST00000581686 676 ntBASIC2.33□□□□□ -2.04
HMGCS2P54868 HMGN2P15-201ENST00000585707 270 ntBASIC2.33□□□□□ -2.04
HMGCS2P54868 AC068790.6-201ENST00000602558 258 ntBASIC2.33□□□□□ -2.04
HMGCS2P54868 AP000942.3-201ENST00000603702 160 ntBASIC2.33□□□□□ -2.04
HMGCS2P54868 AC004492.1-201ENST00000607036 742 ntBASIC2.33□□□□□ -2.04
HMGCS2P54868 AC073534.2-201ENST00000620377 381 ntBASIC2.33□□□□□ -2.04
HMGCS2P54868 AC139792.3-201ENST00000623525 224 ntBASIC2.33□□□□□ -2.04
HMGCS2P54868 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.33□□□□□ -2.04
HMGCS2P54868 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
HMGCS2P54868 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
HMGCS2P54868 RNU6-371P-201ENST00000364283 108 ntBASIC2.32□□□□□ -2.04
HMGCS2P54868 Z98749.2-208ENST00000381646 500 ntBASIC2.32□□□□□ -2.04
HMGCS2P54868 Y_RNA.505-201ENST00000384489 102 ntBASIC2.32□□□□□ -2.04
HMGCS2P54868 RNU6-550P-201ENST00000391057 101 ntBASIC2.32□□□□□ -2.04
HMGCS2P54868 RNU6-387P-201ENST00000411331 105 ntBASIC2.32□□□□□ -2.04
HMGCS2P54868 AC023141.4-201ENST00000412031 328 ntBASIC2.32□□□□□ -2.04
HMGCS2P54868 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC2.32□□□□□ -2.04
HMGCS2P54868 OR6C66P-201ENST00000414917 930 ntBASIC2.32□□□□□ -2.04
HMGCS2P54868 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms