Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 MIR3199-2-201ENST00000636243 86 ntBASIC3.32□□□□□ -1.88
COPAP53621 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
COPAP53621 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
COPAP53621 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
COPAP53621 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.32□□□□□ -1.88
COPAP53621 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.31□□□□□ -1.88
COPAP53621 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
COPAP53621 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
COPAP53621 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC3.31□□□□□ -1.88
COPAP53621 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
COPAP53621 Y_RNA.67-201ENST00000362870 100 ntBASIC3.31□□□□□ -1.88
COPAP53621 Y_RNA.135-201ENST00000363439 95 ntBASIC3.31□□□□□ -1.88
COPAP53621 Y_RNA.387-201ENST00000383918 102 ntBASIC3.31□□□□□ -1.88
COPAP53621 Y_RNA.474-201ENST00000384341 102 ntBASIC3.31□□□□□ -1.88
COPAP53621 MIR548K-201ENST00000408406 116 ntBASIC3.31□□□□□ -1.88
COPAP53621 MORN2-203ENST00000409131 544 ntTSL 5 BASIC3.31□□□□□ -1.88
COPAP53621 RPL37P10-201ENST00000412884 288 ntBASIC3.31□□□□□ -1.88
COPAP53621 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC3.31□□□□□ -1.88
COPAP53621 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC3.31□□□□□ -1.88
COPAP53621 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.31□□□□□ -1.88
COPAP53621 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.31□□□□□ -1.88
COPAP53621 AC233279.1-201ENST00000455300 423 ntBASIC3.31□□□□□ -1.88
COPAP53621 MTND4P17-201ENST00000470444 350 ntBASIC3.31□□□□□ -1.88
COPAP53621 Y_RNA.687-201ENST00000516558 91 ntBASIC3.31□□□□□ -1.88
COPAP53621 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC3.31□□□□□ -1.88
COPAP53621 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC3.31□□□□□ -1.88
COPAP53621 AC026371.1-201ENST00000551867 419 ntBASIC3.31□□□□□ -1.88
COPAP53621 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.31□□□□□ -1.88
COPAP53621 AC078899.3-201ENST00000599065 212 ntBASIC3.31□□□□□ -1.88
COPAP53621 AC008121.1-201ENST00000603244 268 ntBASIC3.31□□□□□ -1.88
COPAP53621 AC123912.5-201ENST00000605470 343 ntBASIC3.31□□□□□ -1.88
COPAP53621 ATP5A1P2-202ENST00000616464 443 ntBASIC3.31□□□□□ -1.88
COPAP53621 AC110079.1-202ENST00000635213 138 ntBASIC3.31□□□□□ -1.88
COPAP53621 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
COPAP53621 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.3□□□□□ -1.88
COPAP53621 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.3□□□□□ -1.88
COPAP53621 RNU4-79P-201ENST00000362764 141 ntBASIC3.3□□□□□ -1.88
COPAP53621 Y_RNA.111-201ENST00000363248 100 ntBASIC3.3□□□□□ -1.88
COPAP53621 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
COPAP53621 SNORD21-201ENST00000383953 95 ntBASIC3.3□□□□□ -1.88
COPAP53621 RNU6-72P-201ENST00000384285 79 ntBASIC3.3□□□□□ -1.88
COPAP53621 RNA5SP354-201ENST00000391247 136 ntBASIC3.3□□□□□ -1.88
COPAP53621 AL360182.1-201ENST00000397433 468 ntBASIC3.3□□□□□ -1.88
COPAP53621 AL031121.1-201ENST00000406553 254 ntBASIC3.3□□□□□ -1.88
COPAP53621 U3.37-201ENST00000408528 213 ntBASIC3.3□□□□□ -1.88
COPAP53621 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.3□□□□□ -1.88
COPAP53621 RPS15AP5-201ENST00000436276 388 ntBASIC3.3□□□□□ -1.88
COPAP53621 HMGN2P10-201ENST00000448085 265 ntBASIC3.3□□□□□ -1.88
COPAP53621 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.3□□□□□ -1.88
COPAP53621 S100A11P2-201ENST00000467589 312 ntBASIC3.3□□□□□ -1.88
COPAP53621 RPS27P27-201ENST00000498779 255 ntBASIC3.3□□□□□ -1.88
COPAP53621 LIAS-206ENST00000513731 826 ntTSL 5 BASIC3.3□□□□□ -1.88
COPAP53621 RN7SKP24-201ENST00000515888 284 ntBASIC3.3□□□□□ -1.88
COPAP53621 RNA5SP380-201ENST00000517190 98 ntBASIC3.3□□□□□ -1.88
COPAP53621 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
COPAP53621 AP005639.2-201ENST00000527592 928 ntBASIC3.3□□□□□ -1.88
COPAP53621 AC100830.2-201ENST00000581636 240 ntBASIC3.3□□□□□ -1.88
COPAP53621 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.3□□□□□ -1.88
COPAP53621 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.3□□□□□ -1.88
COPAP53621 AC135507.2-201ENST00000612443 309 ntBASIC3.3□□□□□ -1.88
COPAP53621 MIR6134-201ENST00000617606 109 ntBASIC3.3□□□□□ -1.88
COPAP53621 Z69720.2-201ENST00000624755 279 ntBASIC3.3□□□□□ -1.88
COPAP53621 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
COPAP53621 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.29□□□□□ -1.88
COPAP53621 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.29□□□□□ -1.88
COPAP53621 Y_RNA.58-201ENST00000362807 102 ntBASIC3.29□□□□□ -1.88
COPAP53621 Y_RNA.154-201ENST00000363624 102 ntBASIC3.29□□□□□ -1.88
COPAP53621 RNY3P1-201ENST00000365085 102 ntBASIC3.29□□□□□ -1.88
COPAP53621 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.29□□□□□ -1.88
COPAP53621 Y_RNA.339-201ENST00000365325 102 ntBASIC3.29□□□□□ -1.88
COPAP53621 RNY3-201ENST00000365484 102 ntBASIC3.29□□□□□ -1.88
COPAP53621 Y_RNA.490-201ENST00000384413 102 ntBASIC3.29□□□□□ -1.88
COPAP53621 UBA52P6-201ENST00000399822 382 ntBASIC3.29□□□□□ -1.88
COPAP53621 RPS20P15-201ENST00000412792 311 ntBASIC3.29□□□□□ -1.88
COPAP53621 AL096701.2-201ENST00000416920 238 ntBASIC3.29□□□□□ -1.88
COPAP53621 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC3.29□□□□□ -1.88
COPAP53621 AC093151.1-201ENST00000427711 313 ntBASIC3.29□□□□□ -1.88
COPAP53621 AC236972.2-201ENST00000434979 310 ntBASIC3.29□□□□□ -1.88
COPAP53621 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC3.29□□□□□ -1.88
COPAP53621 RPS3AP52-201ENST00000435639 297 ntBASIC3.29□□□□□ -1.88
COPAP53621 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC3.29□□□□□ -1.88
COPAP53621 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC3.29□□□□□ -1.88
COPAP53621 HIGD1AP2-201ENST00000446367 280 ntBASIC3.29□□□□□ -1.88
COPAP53621 MTND1P17-201ENST00000448961 204 ntBASIC3.29□□□□□ -1.88
COPAP53621 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC3.29□□□□□ -1.88
COPAP53621 RPL27AP5-201ENST00000469428 449 ntBASIC3.29□□□□□ -1.88
COPAP53621 AL049873.1-201ENST00000480540 376 ntBASIC3.29□□□□□ -1.88
COPAP53621 MTND5P5-201ENST00000503764 376 ntBASIC3.29□□□□□ -1.88
COPAP53621 AC113155.1-201ENST00000511141 769 ntBASIC3.29□□□□□ -1.88
COPAP53621 RNA5SP341-201ENST00000516261 117 ntBASIC3.29□□□□□ -1.88
COPAP53621 RNU1-143P-201ENST00000516296 146 ntBASIC3.29□□□□□ -1.88
COPAP53621 SCARNA20.6-201ENST00000517251 106 ntBASIC3.29□□□□□ -1.88
COPAP53621 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
COPAP53621 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.29□□□□□ -1.88
COPAP53621 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.29□□□□□ -1.88
COPAP53621 AC021739.1-201ENST00000559631 174 ntBASIC3.29□□□□□ -1.88
COPAP53621 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC3.29□□□□□ -1.88
COPAP53621 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.29□□□□□ -1.88
COPAP53621 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.29□□□□□ -1.88
COPAP53621 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 117.2 ms