Protein–RNA interactions for Protein: P48764

SLC9A3, Sodium/hydrogen exchanger 3, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3P48764 SCARNA4-202ENST00000625402 129 ntBASIC2.56□□□□□ -2
SLC9A3P48764 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC2.56□□□□□ -2
SLC9A3P48764 AC135776.4-201ENST00000624300 1904 ntBASIC2.56□□□□□ -2
SLC9A3P48764 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.55□□□□□ -2
SLC9A3P48764 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.55□□□□□ -2
SLC9A3P48764 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
SLC9A3P48764 MIR422A-201ENST00000362286 90 ntBASIC2.55□□□□□ -2
SLC9A3P48764 RNU6-78P-201ENST00000362897 107 ntBASIC2.55□□□□□ -2
SLC9A3P48764 RNU6-525P-201ENST00000363685 104 ntBASIC2.55□□□□□ -2
SLC9A3P48764 Y_RNA.231-201ENST00000364358 102 ntBASIC2.55□□□□□ -2
SLC9A3P48764 Y_RNA.256-201ENST00000364594 104 ntBASIC2.55□□□□□ -2
SLC9A3P48764 Y_RNA.295-201ENST00000364918 102 ntBASIC2.55□□□□□ -2
SLC9A3P48764 SET-203ENST00000372688 801 ntTSL 2 BASIC2.55□□□□□ -2
SLC9A3P48764 DEFA7P-201ENST00000382676 285 ntBASIC2.55□□□□□ -2
SLC9A3P48764 SNORA9-201ENST00000384215 133 ntBASIC2.55□□□□□ -2
SLC9A3P48764 RNU6-748P-201ENST00000384648 107 ntBASIC2.55□□□□□ -2
SLC9A3P48764 AL513475.1-201ENST00000406602 315 ntBASIC2.55□□□□□ -2
SLC9A3P48764 Y_RNA.615-201ENST00000410769 117 ntBASIC2.55□□□□□ -2
SLC9A3P48764 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC2.55□□□□□ -2
SLC9A3P48764 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC2.55□□□□□ -2
SLC9A3P48764 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.55□□□□□ -2
SLC9A3P48764 EIF1P1-201ENST00000421436 341 ntBASIC2.55□□□□□ -2
SLC9A3P48764 MTND4P5-201ENST00000435821 1374 ntBASIC2.55□□□□□ -2
SLC9A3P48764 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.55□□□□□ -2
SLC9A3P48764 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC2.55□□□□□ -2
SLC9A3P48764 FABP5P14-201ENST00000437273 393 ntBASIC2.55□□□□□ -2
SLC9A3P48764 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC2.55□□□□□ -2
SLC9A3P48764 IGKV1OR-3-201ENST00000446944 348 ntBASIC2.55□□□□□ -2
SLC9A3P48764 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.55□□□□□ -2
SLC9A3P48764 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.55□□□□□ -2
SLC9A3P48764 AC003982.1-202ENST00000469928 248 ntBASIC2.55□□□□□ -2
SLC9A3P48764 AC117503.1-201ENST00000472241 394 ntBASIC2.55□□□□□ -2
SLC9A3P48764 RPL23AP45-201ENST00000476406 468 ntBASIC2.55□□□□□ -2
SLC9A3P48764 AC092593.1-201ENST00000515413 1815 ntBASIC2.55□□□□□ -2
SLC9A3P48764 RNU6-189P-201ENST00000516120 101 ntBASIC2.55□□□□□ -2
SLC9A3P48764 SNORA74D-201ENST00000516404 141 ntBASIC2.55□□□□□ -2
SLC9A3P48764 SCARNA13-201ENST00000516672 275 ntBASIC2.55□□□□□ -2
SLC9A3P48764 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.55□□□□□ -2
SLC9A3P48764 AC078814.3-201ENST00000553036 491 ntBASIC2.55□□□□□ -2
SLC9A3P48764 AC090616.3-201ENST00000582184 217 ntBASIC2.55□□□□□ -2
SLC9A3P48764 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.55□□□□□ -2
SLC9A3P48764 AC024153.1-201ENST00000603103 365 ntBASIC2.55□□□□□ -2
SLC9A3P48764 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.55□□□□□ -2
SLC9A3P48764 AC104237.2-201ENST00000612456 443 ntBASIC2.55□□□□□ -2
SLC9A3P48764 AL442067.2-201ENST00000614033 363 ntBASIC2.55□□□□□ -2
SLC9A3P48764 ATP5A1P2-202ENST00000616464 443 ntBASIC2.55□□□□□ -2
SLC9A3P48764 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.55□□□□□ -2
SLC9A3P48764 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
SLC9A3P48764 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.55□□□□□ -2
SLC9A3P48764 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.55□□□□□ -2
SLC9A3P48764 AC138393.1-203ENST00000327086 343 ntBASIC2.54□□□□□ -2
SLC9A3P48764 Y_RNA.167-201ENST00000363735 109 ntBASIC2.54□□□□□ -2
SLC9A3P48764 RNU6-534P-201ENST00000364877 106 ntBASIC2.54□□□□□ -2
SLC9A3P48764 RNU5E-7P-201ENST00000365290 117 ntBASIC2.54□□□□□ -2
SLC9A3P48764 RNU6-1083P-201ENST00000384022 107 ntBASIC2.54□□□□□ -2
SLC9A3P48764 SNORA48.5-201ENST00000391143 135 ntBASIC2.54□□□□□ -2
SLC9A3P48764 AL138885.1-201ENST00000405921 675 ntBASIC2.54□□□□□ -2
SLC9A3P48764 RNU6-1140P-201ENST00000410517 106 ntBASIC2.54□□□□□ -2
SLC9A3P48764 RPLP0P7-201ENST00000416050 667 ntBASIC2.54□□□□□ -2
SLC9A3P48764 NUP35P1-201ENST00000422734 947 ntBASIC2.54□□□□□ -2
SLC9A3P48764 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC2.54□□□□□ -2
SLC9A3P48764 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC2.54□□□□□ -2
SLC9A3P48764 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC2.54□□□□□ -2
SLC9A3P48764 ERLEC1P1-201ENST00000433806 578 ntBASIC2.54□□□□□ -2
SLC9A3P48764 AL671855.1-201ENST00000446875 1203 ntBASIC2.54□□□□□ -2
SLC9A3P48764 AL441985.1-201ENST00000457727 251 ntBASIC2.54□□□□□ -2
SLC9A3P48764 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC2.54□□□□□ -2
SLC9A3P48764 AC083904.1-201ENST00000487828 231 ntBASIC2.54□□□□□ -2
SLC9A3P48764 RPL38P4-201ENST00000502376 214 ntBASIC2.54□□□□□ -2
SLC9A3P48764 AC091885.1-201ENST00000506658 268 ntBASIC2.54□□□□□ -2
SLC9A3P48764 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC2.54□□□□□ -2
SLC9A3P48764 HIGD1AP13-201ENST00000509878 289 ntBASIC2.54□□□□□ -2
SLC9A3P48764 MTND4LP26-201ENST00000518144 282 ntBASIC2.54□□□□□ -2
SLC9A3P48764 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC2.54□□□□□ -2
SLC9A3P48764 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.54□□□□□ -2
SLC9A3P48764 COX6CP5-201ENST00000527162 228 ntBASIC2.54□□□□□ -2
SLC9A3P48764 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC2.54□□□□□ -2
SLC9A3P48764 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC2.54□□□□□ -2
SLC9A3P48764 AC023050.3-201ENST00000541142 333 ntBASIC2.54□□□□□ -2
SLC9A3P48764 CR383656.8-201ENST00000549046 145 ntBASIC2.54□□□□□ -2
SLC9A3P48764 ZNF861P-201ENST00000588126 639 ntBASIC2.54□□□□□ -2
SLC9A3P48764 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.54□□□□□ -2
SLC9A3P48764 AP000907.4-201ENST00000604143 237 ntBASIC2.54□□□□□ -2
SLC9A3P48764 AL121757.2-201ENST00000611223 313 ntBASIC2.54□□□□□ -2
SLC9A3P48764 uc_338.14-201ENST00000613162 166 ntBASIC2.54□□□□□ -2
SLC9A3P48764 AC007014.2-201ENST00000615581 479 ntBASIC2.54□□□□□ -2
SLC9A3P48764 AC103705.1-201ENST00000619013 241 ntBASIC2.54□□□□□ -2
SLC9A3P48764 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC2.54□□□□□ -2
SLC9A3P48764 AC138627.2-201ENST00000624202 601 ntBASIC2.54□□□□□ -2
SLC9A3P48764 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.54□□□□□ -2
SLC9A3P48764 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.54□□□□□ -2
SLC9A3P48764 RBBP8P1-201ENST00000449447 1844 ntBASIC2.54□□□□□ -2
SLC9A3P48764 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC2.54□□□□□ -2
SLC9A3P48764 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
SLC9A3P48764 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.53□□□□□ -2
SLC9A3P48764 AL109809.4-201ENST00000603520 2185 ntBASIC2.53□□□□□ -2
SLC9A3P48764 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.53□□□□□ -2
SLC9A3P48764 RNU6-82P-201ENST00000363970 107 ntBASIC2.53□□□□□ -2
SLC9A3P48764 RNU6-461P-201ENST00000364195 107 ntBASIC2.53□□□□□ -2
SLC9A3P48764 RNU6-522P-201ENST00000364497 107 ntBASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms