Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 RNA5SP361-201ENST00000362686 118 ntBASIC0.17□□□□□ -2.38
CLIP1P30622 SNORD14D-201ENST00000384390 87 ntBASIC0.17□□□□□ -2.38
CLIP1P30622 RNU2-48P-201ENST00000410694 191 ntBASIC0.17□□□□□ -2.38
CLIP1P30622 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC0.17□□□□□ -2.38
CLIP1P30622 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.17□□□□□ -2.38
CLIP1P30622 RPP40P1-201ENST00000426762 456 ntBASIC0.17□□□□□ -2.38
CLIP1P30622 FO393419.3-201ENST00000428741 282 ntBASIC0.17□□□□□ -2.38
CLIP1P30622 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC0.17□□□□□ -2.38
CLIP1P30622 AC015724.1-201ENST00000478577 156 ntBASIC0.17□□□□□ -2.38
CLIP1P30622 RPL22P13-201ENST00000493291 347 ntBASIC0.17□□□□□ -2.38
CLIP1P30622 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC0.17□□□□□ -2.38
CLIP1P30622 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC0.17□□□□□ -2.38
CLIP1P30622 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.17□□□□□ -2.38
CLIP1P30622 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC0.17□□□□□ -2.38
CLIP1P30622 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC0.17□□□□□ -2.38
CLIP1P30622 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC0.17□□□□□ -2.38
CLIP1P30622 ADAM3B-201ENST00000569937 840 ntBASIC0.17□□□□□ -2.38
CLIP1P30622 MIR4305-201ENST00000583252 102 ntBASIC0.17□□□□□ -2.38
CLIP1P30622 AL109620.1-201ENST00000618738 1197 ntBASIC0.17□□□□□ -2.38
CLIP1P30622 RNU5E-1-201ENST00000362477 120 ntBASIC0.16□□□□□ -2.38
CLIP1P30622 Y_RNA.303-201ENST00000364998 94 ntBASIC0.16□□□□□ -2.38
CLIP1P30622 SNORA4.3-201ENST00000365564 137 ntBASIC0.16□□□□□ -2.38
CLIP1P30622 RNU6-741P-201ENST00000383889 107 ntBASIC0.16□□□□□ -2.38
CLIP1P30622 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.16□□□□□ -2.38
CLIP1P30622 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC0.16□□□□□ -2.38
CLIP1P30622 OR2AQ1P-201ENST00000451972 200 ntBASIC0.16□□□□□ -2.38
CLIP1P30622 RPL36AP48-201ENST00000485521 314 ntBASIC0.16□□□□□ -2.38
CLIP1P30622 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC0.16□□□□□ -2.38
CLIP1P30622 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC0.16□□□□□ -2.38
CLIP1P30622 AL512310.8-201ENST00000550183 120 ntBASIC0.16□□□□□ -2.38
CLIP1P30622 ROCK1P1-201ENST00000573767 549 ntBASIC0.16□□□□□ -2.38
CLIP1P30622 AL671309.1-201ENST00000603750 544 ntBASIC0.16□□□□□ -2.38
CLIP1P30622 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC0.15□□□□□ -2.39
CLIP1P30622 RNU6-1151P-201ENST00000384684 107 ntBASIC0.15□□□□□ -2.39
CLIP1P30622 RNU6-700P-201ENST00000391043 107 ntBASIC0.15□□□□□ -2.39
CLIP1P30622 RPEP5-201ENST00000441137 268 ntBASIC0.15□□□□□ -2.39
CLIP1P30622 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC0.15□□□□□ -2.39
CLIP1P30622 MTND2P24-201ENST00000453434 806 ntBASIC0.15□□□□□ -2.39
CLIP1P30622 RPL26P26-201ENST00000480251 434 ntBASIC0.15□□□□□ -2.39
CLIP1P30622 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC0.15□□□□□ -2.39
CLIP1P30622 SNORD19.2-201ENST00000516978 73 ntBASIC0.15□□□□□ -2.39
CLIP1P30622 CR383656.7-201ENST00000548164 174 ntBASIC0.15□□□□□ -2.39
CLIP1P30622 AC006199.1-201ENST00000548728 219 ntBASIC0.15□□□□□ -2.39
CLIP1P30622 MIR4768-201ENST00000585270 74 ntBASIC0.15□□□□□ -2.39
CLIP1P30622 AC016542.1-201ENST00000608259 493 ntBASIC0.15□□□□□ -2.39
CLIP1P30622 FAM157A-202ENST00000615155 405 ntBASIC0.15□□□□□ -2.39
CLIP1P30622 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC0.14□□□□□ -2.39
CLIP1P30622 Y_RNA.170-201ENST00000363746 110 ntBASIC0.14□□□□□ -2.39
CLIP1P30622 RNU4-12P-201ENST00000365233 139 ntBASIC0.14□□□□□ -2.39
CLIP1P30622 MIR19B1-201ENST00000384829 87 ntBASIC0.14□□□□□ -2.39
CLIP1P30622 RPS3AP1-201ENST00000413190 320 ntBASIC0.14□□□□□ -2.39
CLIP1P30622 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC0.14□□□□□ -2.39
CLIP1P30622 BEND7P1-201ENST00000422058 457 ntBASIC0.14□□□□□ -2.39
CLIP1P30622 MTND2P9-201ENST00000422293 931 ntBASIC0.14□□□□□ -2.39
CLIP1P30622 SKA2P1-201ENST00000425592 390 ntBASIC0.14□□□□□ -2.39
CLIP1P30622 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC0.14□□□□□ -2.39
CLIP1P30622 AC245102.2-201ENST00000448956 180 ntBASIC0.14□□□□□ -2.39
CLIP1P30622 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC0.14□□□□□ -2.39
CLIP1P30622 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC0.14□□□□□ -2.39
CLIP1P30622 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC0.14□□□□□ -2.39
CLIP1P30622 RN7SKP88-201ENST00000516847 250 ntBASIC0.14□□□□□ -2.39
CLIP1P30622 AP003066.2-201ENST00000529375 555 ntBASIC0.14□□□□□ -2.39
CLIP1P30622 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC0.14□□□□□ -2.39
CLIP1P30622 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC0.14□□□□□ -2.39
CLIP1P30622 AC022432.1-201ENST00000595739 310 ntBASIC0.14□□□□□ -2.39
CLIP1P30622 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.14□□□□□ -2.39
CLIP1P30622 CLIC4P2-201ENST00000601934 717 ntBASIC0.14□□□□□ -2.39
CLIP1P30622 AP003465.2-201ENST00000602571 373 ntBASIC0.14□□□□□ -2.39
CLIP1P30622 7SK.8-201ENST00000612110 250 ntBASIC0.14□□□□□ -2.39
CLIP1P30622 7SK.11-201ENST00000615477 250 ntBASIC0.14□□□□□ -2.39
CLIP1P30622 7SK.13-201ENST00000622040 250 ntBASIC0.14□□□□□ -2.39
CLIP1P30622 AC068205.3-201ENST00000636385 468 ntBASIC0.14□□□□□ -2.39
CLIP1P30622 FARSBP1-201ENST00000435808 1778 ntBASIC0.14□□□□□ -2.39
CLIP1P30622 SNORD114-24-201ENST00000365029 72 ntBASIC0.13□□□□□ -2.39
CLIP1P30622 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC0.13□□□□□ -2.39
CLIP1P30622 AC084024.2-201ENST00000503480 791 ntBASIC0.13□□□□□ -2.39
CLIP1P30622 PTP4A1P4-201ENST00000512479 322 ntBASIC0.13□□□□□ -2.39
CLIP1P30622 RNU4-18P-201ENST00000516751 149 ntBASIC0.13□□□□□ -2.39
CLIP1P30622 MDM2-232ENST00000544561 213 ntTSL 5 BASIC0.13□□□□□ -2.39
CLIP1P30622 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC0.13□□□□□ -2.39
CLIP1P30622 AC136619.2-201ENST00000563361 631 ntBASIC0.13□□□□□ -2.39
CLIP1P30622 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.13□□□□□ -2.39
CLIP1P30622 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC0.13□□□□□ -2.39
CLIP1P30622 RPL30P11-203ENST00000598995 310 ntBASIC0.13□□□□□ -2.39
CLIP1P30622 Z82243.1-201ENST00000609432 473 ntBASIC0.13□□□□□ -2.39
CLIP1P30622 AC104465.1-201ENST00000611365 139 ntBASIC0.13□□□□□ -2.39
CLIP1P30622 MIR6134-201ENST00000617606 109 ntBASIC0.13□□□□□ -2.39
CLIP1P30622 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC0.13□□□□□ -2.39
CLIP1P30622 RNU6-945P-201ENST00000383947 107 ntBASIC0.13□□□□□ -2.39
CLIP1P30622 NDUFS5P4-201ENST00000412983 318 ntBASIC0.13□□□□□ -2.39
CLIP1P30622 AL161935.2-201ENST00000414627 60 ntBASIC0.13□□□□□ -2.39
CLIP1P30622 MTCO2P12-201ENST00000427426 682 ntBASIC0.13□□□□□ -2.39
CLIP1P30622 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC0.13□□□□□ -2.39
CLIP1P30622 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC0.13□□□□□ -2.39
CLIP1P30622 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC0.13□□□□□ -2.39
CLIP1P30622 AC112771.1-201ENST00000463581 102 ntBASIC0.13□□□□□ -2.39
CLIP1P30622 HMGN1P13-201ENST00000505795 138 ntBASIC0.13□□□□□ -2.39
CLIP1P30622 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC0.13□□□□□ -2.39
CLIP1P30622 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC0.13□□□□□ -2.39
CLIP1P30622 AC012213.3-201ENST00000577199 777 ntBASIC0.13□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 158.9 ms