Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CNGA1P29973 RNU6-428P-201ENST00000362942 107 ntBASIC3.78□□□□□ -1.8
CNGA1P29973 RNU4-73P-201ENST00000363164 141 ntBASIC3.78□□□□□ -1.8
CNGA1P29973 MIR767-201ENST00000390228 109 ntBASIC3.78□□□□□ -1.8
CNGA1P29973 RPS29P13-201ENST00000402041 169 ntBASIC3.78□□□□□ -1.8
CNGA1P29973 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.78□□□□□ -1.8
CNGA1P29973 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.78□□□□□ -1.8
CNGA1P29973 RPS3AP52-201ENST00000435639 297 ntBASIC3.78□□□□□ -1.8
CNGA1P29973 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC3.78□□□□□ -1.8
CNGA1P29973 RPS27P27-201ENST00000498779 255 ntBASIC3.78□□□□□ -1.8
CNGA1P29973 RPL39P5-202ENST00000512505 151 ntBASIC3.78□□□□□ -1.8
CNGA1P29973 AC010265.1-201ENST00000513509 211 ntBASIC3.78□□□□□ -1.8
CNGA1P29973 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC3.78□□□□□ -1.8
CNGA1P29973 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC3.78□□□□□ -1.8
CNGA1P29973 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.78□□□□□ -1.8
CNGA1P29973 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC3.78□□□□□ -1.8
CNGA1P29973 AC103996.1-201ENST00000555468 102 ntBASIC3.78□□□□□ -1.8
CNGA1P29973 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.78□□□□□ -1.8
CNGA1P29973 AC110079.1-202ENST00000635213 138 ntBASIC3.78□□□□□ -1.8
CNGA1P29973 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.78□□□□□ -1.8
CNGA1P29973 AC004944.1-201ENST00000517807 3059 ntBASIC3.78□□□□□ -1.8
CNGA1P29973 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CNGA1P29973 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CNGA1P29973 RNU6-105P-201ENST00000363909 104 ntBASIC3.77□□□□□ -1.81
CNGA1P29973 RNU6-336P-201ENST00000364891 107 ntBASIC3.77□□□□□ -1.81
CNGA1P29973 CD24P4-201ENST00000382840 243 ntBASIC3.77□□□□□ -1.81
CNGA1P29973 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
CNGA1P29973 RNU6-1106P-201ENST00000390845 107 ntBASIC3.77□□□□□ -1.81
CNGA1P29973 PTGES3P4-201ENST00000426243 356 ntBASIC3.77□□□□□ -1.81
CNGA1P29973 MTND3P23-201ENST00000431980 347 ntBASIC3.77□□□□□ -1.81
CNGA1P29973 RPS15AP10-201ENST00000432472 382 ntBASIC3.77□□□□□ -1.81
CNGA1P29973 FABP5P14-201ENST00000437273 393 ntBASIC3.77□□□□□ -1.81
CNGA1P29973 RNU7-187P-201ENST00000458985 68 ntBASIC3.77□□□□□ -1.81
CNGA1P29973 RNU6-1037P-201ENST00000459571 107 ntBASIC3.77□□□□□ -1.81
CNGA1P29973 MED28P2-201ENST00000475771 317 ntBASIC3.77□□□□□ -1.81
CNGA1P29973 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC3.77□□□□□ -1.81
CNGA1P29973 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.77□□□□□ -1.81
CNGA1P29973 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.77□□□□□ -1.81
CNGA1P29973 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC3.77□□□□□ -1.81
CNGA1P29973 RN7SKP24-201ENST00000515888 284 ntBASIC3.77□□□□□ -1.81
CNGA1P29973 IMMP1LP2-201ENST00000552954 492 ntBASIC3.77□□□□□ -1.81
CNGA1P29973 AC005476.1-201ENST00000554427 397 ntBASIC3.77□□□□□ -1.81
CNGA1P29973 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.77□□□□□ -1.81
CNGA1P29973 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.77□□□□□ -1.81
CNGA1P29973 AC009163.5-201ENST00000575421 637 ntBASIC3.77□□□□□ -1.81
CNGA1P29973 AC009314.1-201ENST00000603871 304 ntBASIC3.77□□□□□ -1.81
CNGA1P29973 AC113139.1-201ENST00000605049 239 ntBASIC3.77□□□□□ -1.81
CNGA1P29973 AC005046.1-201ENST00000608515 625 ntBASIC3.77□□□□□ -1.81
CNGA1P29973 AC099778.2-201ENST00000610904 211 ntBASIC3.77□□□□□ -1.81
CNGA1P29973 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.77□□□□□ -1.81
CNGA1P29973 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CNGA1P29973 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CNGA1P29973 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.76□□□□□ -1.81
CNGA1P29973 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.76□□□□□ -1.81
CNGA1P29973 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.76□□□□□ -1.81
CNGA1P29973 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.76□□□□□ -1.81
CNGA1P29973 SNORD62.1-201ENST00000362541 86 ntBASIC3.76□□□□□ -1.81
CNGA1P29973 Y_RNA.61-201ENST00000362835 102 ntBASIC3.76□□□□□ -1.81
CNGA1P29973 RNU1-140P-201ENST00000365040 165 ntBASIC3.76□□□□□ -1.81
CNGA1P29973 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CNGA1P29973 SNORD116-20-201ENST00000384529 92 ntBASIC3.76□□□□□ -1.81
CNGA1P29973 AL030996.1-201ENST00000411430 235 ntBASIC3.76□□□□□ -1.81
CNGA1P29973 RPL37P10-201ENST00000412884 288 ntBASIC3.76□□□□□ -1.81
CNGA1P29973 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.76□□□□□ -1.81
CNGA1P29973 Y_RNA.635-201ENST00000459041 101 ntBASIC3.76□□□□□ -1.81
CNGA1P29973 AC109925.1-201ENST00000478069 331 ntBASIC3.76□□□□□ -1.81
CNGA1P29973 AC097462.2-201ENST00000504623 481 ntBASIC3.76□□□□□ -1.81
CNGA1P29973 AKIRIN2P1-201ENST00000505898 352 ntBASIC3.76□□□□□ -1.81
CNGA1P29973 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.76□□□□□ -1.81
CNGA1P29973 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.76□□□□□ -1.81
CNGA1P29973 SNORA70.19-201ENST00000516717 90 ntBASIC3.76□□□□□ -1.81
CNGA1P29973 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.76□□□□□ -1.81
CNGA1P29973 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC3.76□□□□□ -1.81
CNGA1P29973 AL355375.2-201ENST00000574825 175 ntBASIC3.76□□□□□ -1.81
CNGA1P29973 VN1R107P-201ENST00000601784 209 ntBASIC3.76□□□□□ -1.81
CNGA1P29973 AL391813.1-201ENST00000603098 260 ntBASIC3.76□□□□□ -1.81
CNGA1P29973 AC244517.12-201ENST00000623581 663 ntBASIC3.76□□□□□ -1.81
CNGA1P29973 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.76□□□□□ -1.81
CNGA1P29973 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CNGA1P29973 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.76□□□□□ -1.81
CNGA1P29973 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.76□□□□□ -1.81
CNGA1P29973 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.75□□□□□ -1.81
CNGA1P29973 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
CNGA1P29973 RNA5SP139-201ENST00000364340 117 ntBASIC3.75□□□□□ -1.81
CNGA1P29973 Y_RNA.509-201ENST00000384506 99 ntBASIC3.75□□□□□ -1.81
CNGA1P29973 ATG3P1-201ENST00000419507 911 ntBASIC3.75□□□□□ -1.81
CNGA1P29973 AC009414.1-201ENST00000427200 443 ntBASIC3.75□□□□□ -1.81
CNGA1P29973 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.75□□□□□ -1.81
CNGA1P29973 AK3P2-201ENST00000507976 429 ntBASIC3.75□□□□□ -1.81
CNGA1P29973 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.75□□□□□ -1.81
CNGA1P29973 AC093027.1-201ENST00000546698 429 ntBASIC3.75□□□□□ -1.81
CNGA1P29973 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.75□□□□□ -1.81
CNGA1P29973 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC3.75□□□□□ -1.81
CNGA1P29973 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC3.75□□□□□ -1.81
CNGA1P29973 AC073657.2-201ENST00000605661 303 ntBASIC3.75□□□□□ -1.81
CNGA1P29973 AL161423.1-201ENST00000613700 262 ntBASIC3.75□□□□□ -1.81
CNGA1P29973 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
CNGA1P29973 MTND4P23-201ENST00000447723 1363 ntBASIC3.75□□□□□ -1.81
CNGA1P29973 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.74□□□□□ -1.81
CNGA1P29973 AL356274.2-201ENST00000624379 3752 ntBASIC3.74□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 144.6 ms