Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC1.02□□□□□ -2.25
COL4A5P29400 AP003355.1-201ENST00000518956 587 ntBASIC1.02□□□□□ -2.25
COL4A5P29400 UTP23-205ENST00000520733 369 ntTSL 3 BASIC1.02□□□□□ -2.25
COL4A5P29400 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC1.02□□□□□ -2.25
COL4A5P29400 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC1.02□□□□□ -2.25
COL4A5P29400 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC1.02□□□□□ -2.25
COL4A5P29400 MIR4299-201ENST00000577899 72 ntBASIC1.02□□□□□ -2.25
COL4A5P29400 BNIP3P25-201ENST00000596023 559 ntBASIC1.02□□□□□ -2.25
COL4A5P29400 AC096720.1-201ENST00000604441 183 ntBASIC1.02□□□□□ -2.25
COL4A5P29400 ELOCP5-201ENST00000604924 333 ntBASIC1.02□□□□□ -2.25
COL4A5P29400 U6.99-201ENST00000637524 83 ntBASIC1.02□□□□□ -2.25
COL4A5P29400 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC1.02□□□□□ -2.25
COL4A5P29400 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.02□□□□□ -2.25
COL4A5P29400 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
COL4A5P29400 CISD1P1-201ENST00000393907 327 ntBASIC1.01□□□□□ -2.25
COL4A5P29400 MIR934-201ENST00000401241 83 ntBASIC1.01□□□□□ -2.25
COL4A5P29400 AL603865.2-201ENST00000401679 213 ntBASIC1.01□□□□□ -2.25
COL4A5P29400 MIR320C1-201ENST00000408566 88 ntBASIC1.01□□□□□ -2.25
COL4A5P29400 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC1.01□□□□□ -2.25
COL4A5P29400 BTF3P15-201ENST00000455606 336 ntBASIC1.01□□□□□ -2.25
COL4A5P29400 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC1.01□□□□□ -2.25
COL4A5P29400 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC1.01□□□□□ -2.25
COL4A5P29400 AC021451.1-201ENST00000523498 1129 ntBASIC1.01□□□□□ -2.25
COL4A5P29400 AP005639.2-201ENST00000527592 928 ntBASIC1.01□□□□□ -2.25
COL4A5P29400 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC1.01□□□□□ -2.25
COL4A5P29400 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC1.01□□□□□ -2.25
COL4A5P29400 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.01□□□□□ -2.25
COL4A5P29400 AC060771.1-201ENST00000582031 164 ntBASIC1.01□□□□□ -2.25
COL4A5P29400 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC1.01□□□□□ -2.25
COL4A5P29400 AC018926.1-201ENST00000616335 435 ntBASIC1.01□□□□□ -2.25
COL4A5P29400 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
COL4A5P29400 AL356094.1-201ENST00000624663 1212 ntBASIC1.01□□□□□ -2.25
COL4A5P29400 AC017037.3-201ENST00000625016 472 ntBASIC1.01□□□□□ -2.25
COL4A5P29400 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
COL4A5P29400 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.01□□□□□ -2.25
COL4A5P29400 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
COL4A5P29400 RNU6-289P-201ENST00000364093 107 ntBASIC1□□□□□ -2.25
COL4A5P29400 MIR1197-201ENST00000408818 88 ntBASIC1□□□□□ -2.25
COL4A5P29400 RNA5SP193-201ENST00000410353 107 ntBASIC1□□□□□ -2.25
COL4A5P29400 RNA5SP127-201ENST00000411051 133 ntBASIC1□□□□□ -2.25
COL4A5P29400 RNA5SP450-201ENST00000411206 102 ntBASIC1□□□□□ -2.25
COL4A5P29400 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1□□□□□ -2.25
COL4A5P29400 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC1□□□□□ -2.25
COL4A5P29400 snoU109.1-201ENST00000459339 135 ntBASIC1□□□□□ -2.25
COL4A5P29400 AP001324.2-201ENST00000461163 319 ntBASIC1□□□□□ -2.25
COL4A5P29400 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC1□□□□□ -2.25
COL4A5P29400 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC1□□□□□ -2.25
COL4A5P29400 AC109927.2-201ENST00000506416 303 ntBASIC1□□□□□ -2.25
COL4A5P29400 AC116655.1-201ENST00000508324 901 ntBASIC1□□□□□ -2.25
COL4A5P29400 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1□□□□□ -2.25
COL4A5P29400 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC1□□□□□ -2.25
COL4A5P29400 RNU6-572P-201ENST00000516724 80 ntBASIC1□□□□□ -2.25
COL4A5P29400 MIR3198-2-201ENST00000577868 80 ntBASIC1□□□□□ -2.25
COL4A5P29400 AC008749.1-201ENST00000597650 306 ntBASIC1□□□□□ -2.25
COL4A5P29400 MTATP6P2-201ENST00000603319 678 ntBASIC1□□□□□ -2.25
COL4A5P29400 RPL21P136-201ENST00000605378 396 ntBASIC1□□□□□ -2.25
COL4A5P29400 AL022345.1-201ENST00000607292 135 ntBASIC1□□□□□ -2.25
COL4A5P29400 AC104985.3-201ENST00000623479 597 ntBASIC1□□□□□ -2.25
COL4A5P29400 AC092192.1-201ENST00000633154 1018 ntBASIC1□□□□□ -2.25
COL4A5P29400 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1□□□□□ -2.25
COL4A5P29400 AC245060.5-201ENST00000610778 3293 ntBASIC1□□□□□ -2.25
COL4A5P29400 Y_RNA.274-201ENST00000364714 101 ntBASIC1□□□□□ -2.25
COL4A5P29400 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC1□□□□□ -2.25
COL4A5P29400 AC068050.1-201ENST00000394891 380 ntBASIC1□□□□□ -2.25
COL4A5P29400 AC138623.1-201ENST00000418060 216 ntBASIC1□□□□□ -2.25
COL4A5P29400 USP9YP21-201ENST00000420603 432 ntBASIC1□□□□□ -2.25
COL4A5P29400 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC1□□□□□ -2.25
COL4A5P29400 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC1□□□□□ -2.25
COL4A5P29400 AC104651.1-201ENST00000427559 735 ntBASIC1□□□□□ -2.25
COL4A5P29400 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC1□□□□□ -2.25
COL4A5P29400 COX7BP2-201ENST00000437976 242 ntBASIC1□□□□□ -2.25
COL4A5P29400 MTND4P25-201ENST00000441039 533 ntBASIC1□□□□□ -2.25
COL4A5P29400 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC1□□□□□ -2.25
COL4A5P29400 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC1□□□□□ -2.25
COL4A5P29400 MEMO1P3-201ENST00000459811 302 ntBASIC1□□□□□ -2.25
COL4A5P29400 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC1□□□□□ -2.25
COL4A5P29400 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC1□□□□□ -2.25
COL4A5P29400 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC1□□□□□ -2.25
COL4A5P29400 AC020699.1-201ENST00000505161 445 ntBASIC1□□□□□ -2.25
COL4A5P29400 RNU6-678P-201ENST00000516832 109 ntBASIC1□□□□□ -2.25
COL4A5P29400 NAP1L1P1-201ENST00000524793 1063 ntBASIC1□□□□□ -2.25
COL4A5P29400 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC1□□□□□ -2.25
COL4A5P29400 VN1R83P-201ENST00000595685 445 ntBASIC1□□□□□ -2.25
COL4A5P29400 AC005776.1-201ENST00000603164 290 ntBASIC1□□□□□ -2.25
COL4A5P29400 AL133445.2-201ENST00000611191 527 ntBASIC1□□□□□ -2.25
COL4A5P29400 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.99□□□□□ -2.25
COL4A5P29400 AP000776.1-201ENST00000530032 1663 ntBASIC0.99□□□□□ -2.25
COL4A5P29400 RNU6-1284P-201ENST00000363701 100 ntBASIC0.99□□□□□ -2.25
COL4A5P29400 RNU6-744P-201ENST00000365557 107 ntBASIC0.99□□□□□ -2.25
COL4A5P29400 RNU6-1316P-201ENST00000384242 108 ntBASIC0.99□□□□□ -2.25
COL4A5P29400 AC013262.1-201ENST00000426710 252 ntBASIC0.99□□□□□ -2.25
COL4A5P29400 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC0.99□□□□□ -2.25
COL4A5P29400 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC0.99□□□□□ -2.25
COL4A5P29400 ZNF736P11Y-201ENST00000442535 1213 ntBASIC0.99□□□□□ -2.25
COL4A5P29400 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC0.99□□□□□ -2.25
COL4A5P29400 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC0.99□□□□□ -2.25
COL4A5P29400 AKIRIN2P1-201ENST00000505898 352 ntBASIC0.99□□□□□ -2.25
COL4A5P29400 FAM206BP-201ENST00000510179 541 ntBASIC0.99□□□□□ -2.25
COL4A5P29400 LRRC34P2-201ENST00000514850 553 ntBASIC0.99□□□□□ -2.25
COL4A5P29400 SNORA4.4-201ENST00000515921 135 ntBASIC0.99□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 113 ms