Protein–RNA interactions for Protein: P29074

PTPN4, Tyrosine-protein phosphatase non-receptor type 4, humanhuman

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4P29074 RNU6-456P-201ENST00000384493 107 ntBASIC2.28□□□□□ -2.04
PTPN4P29074 MIR518D-201ENST00000385014 87 ntBASIC2.28□□□□□ -2.04
PTPN4P29074 CISD1P1-201ENST00000393907 327 ntBASIC2.28□□□□□ -2.04
PTPN4P29074 AL663109.1-201ENST00000411498 844 ntBASIC2.28□□□□□ -2.04
PTPN4P29074 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.28□□□□□ -2.04
PTPN4P29074 AL031779.1-201ENST00000415663 330 ntBASIC2.28□□□□□ -2.04
PTPN4P29074 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC2.28□□□□□ -2.04
PTPN4P29074 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.28□□□□□ -2.04
PTPN4P29074 AC016907.1-201ENST00000419483 435 ntBASIC2.28□□□□□ -2.04
PTPN4P29074 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC2.28□□□□□ -2.04
PTPN4P29074 MTCYBP5-201ENST00000423752 1135 ntBASIC2.28□□□□□ -2.04
PTPN4P29074 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC2.28□□□□□ -2.04
PTPN4P29074 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC2.28□□□□□ -2.04
PTPN4P29074 AC016691.1-201ENST00000441321 413 ntBASIC2.28□□□□□ -2.04
PTPN4P29074 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.28□□□□□ -2.04
PTPN4P29074 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC2.28□□□□□ -2.04
PTPN4P29074 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC2.28□□□□□ -2.04
PTPN4P29074 AL353705.4-201ENST00000449661 238 ntBASIC2.28□□□□□ -2.04
PTPN4P29074 snoU13.26-201ENST00000459452 105 ntBASIC2.28□□□□□ -2.04
PTPN4P29074 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC2.28□□□□□ -2.04
PTPN4P29074 AP001324.2-201ENST00000461163 319 ntBASIC2.28□□□□□ -2.04
PTPN4P29074 DYNLL1P5-201ENST00000467158 270 ntBASIC2.28□□□□□ -2.04
PTPN4P29074 RPL36AP48-201ENST00000485521 314 ntBASIC2.28□□□□□ -2.04
PTPN4P29074 RPS29P21-201ENST00000496272 170 ntBASIC2.28□□□□□ -2.04
PTPN4P29074 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC2.28□□□□□ -2.04
PTPN4P29074 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC2.28□□□□□ -2.04
PTPN4P29074 AP004607.1-201ENST00000524456 203 ntBASIC2.28□□□□□ -2.04
PTPN4P29074 MTND1P15-201ENST00000579262 949 ntBASIC2.28□□□□□ -2.04
PTPN4P29074 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.28□□□□□ -2.04
PTPN4P29074 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC2.28□□□□□ -2.04
PTPN4P29074 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.28□□□□□ -2.04
PTPN4P29074 Z84480.1-201ENST00000605131 311 ntBASIC2.28□□□□□ -2.04
PTPN4P29074 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC2.28□□□□□ -2.04
PTPN4P29074 MIR6895-201ENST00000613497 78 ntBASIC2.28□□□□□ -2.04
PTPN4P29074 AL161423.1-201ENST00000613700 262 ntBASIC2.28□□□□□ -2.04
PTPN4P29074 AP001486.3-201ENST00000615334 372 ntBASIC2.28□□□□□ -2.04
PTPN4P29074 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC2.28□□□□□ -2.04
PTPN4P29074 AL160394.1-201ENST00000624765 724 ntBASIC2.28□□□□□ -2.04
PTPN4P29074 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
PTPN4P29074 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
PTPN4P29074 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.28□□□□□ -2.05
PTPN4P29074 ANKRD36BP1-202ENST00000604892 1417 ntBASIC2.27□□□□□ -2.05
PTPN4P29074 AC006020.1-201ENST00000420179 1854 ntBASIC2.27□□□□□ -2.05
PTPN4P29074 SNORD115-7-201ENST00000365306 82 ntBASIC2.27□□□□□ -2.05
PTPN4P29074 SNORA75B-201ENST00000384053 137 ntBASIC2.27□□□□□ -2.05
PTPN4P29074 Y_RNA.576-201ENST00000384781 102 ntBASIC2.27□□□□□ -2.05
PTPN4P29074 MIR454-201ENST00000390180 115 ntBASIC2.27□□□□□ -2.05
PTPN4P29074 Y_RNA.582-201ENST00000391023 95 ntBASIC2.27□□□□□ -2.05
PTPN4P29074 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.27□□□□□ -2.05
PTPN4P29074 AC097463.2-201ENST00000421074 142 ntBASIC2.27□□□□□ -2.05
PTPN4P29074 USP9YP14-201ENST00000430663 563 ntBASIC2.27□□□□□ -2.05
PTPN4P29074 AL139415.2-201ENST00000431968 163 ntBASIC2.27□□□□□ -2.05
PTPN4P29074 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC2.27□□□□□ -2.05
PTPN4P29074 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC2.27□□□□□ -2.05
PTPN4P29074 CYP2C59P-201ENST00000457790 269 ntBASIC2.27□□□□□ -2.05
PTPN4P29074 UBL5P3-201ENST00000475112 231 ntBASIC2.27□□□□□ -2.05
PTPN4P29074 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.27□□□□□ -2.05
PTPN4P29074 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC2.27□□□□□ -2.05
PTPN4P29074 MTCO3P7-201ENST00000510008 774 ntBASIC2.27□□□□□ -2.05
PTPN4P29074 AC091133.4-201ENST00000511142 308 ntBASIC2.27□□□□□ -2.05
PTPN4P29074 RNU6-405P-201ENST00000516637 110 ntBASIC2.27□□□□□ -2.05
PTPN4P29074 RNU6-685P-201ENST00000517088 95 ntBASIC2.27□□□□□ -2.05
PTPN4P29074 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC2.27□□□□□ -2.05
PTPN4P29074 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC2.27□□□□□ -2.05
PTPN4P29074 AC121758.2-201ENST00000553271 193 ntBASIC2.27□□□□□ -2.05
PTPN4P29074 SUB1P2-201ENST00000556401 297 ntBASIC2.27□□□□□ -2.05
PTPN4P29074 AC078899.2-201ENST00000595282 212 ntBASIC2.27□□□□□ -2.05
PTPN4P29074 AC103810.6-201ENST00000606708 136 ntBASIC2.27□□□□□ -2.05
PTPN4P29074 AC126118.1-201ENST00000607744 628 ntBASIC2.27□□□□□ -2.05
PTPN4P29074 MIR5739-201ENST00000619803 80 ntBASIC2.27□□□□□ -2.05
PTPN4P29074 AC024581.2-201ENST00000619986 252 ntBASIC2.27□□□□□ -2.05
PTPN4P29074 AC009161.2-201ENST00000624626 138 ntBASIC2.27□□□□□ -2.05
PTPN4P29074 AP003400.5-201ENST00000624827 617 ntBASIC2.27□□□□□ -2.05
PTPN4P29074 MIR1291-201ENST00000627649 87 ntBASIC2.27□□□□□ -2.05
PTPN4P29074 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.27□□□□□ -2.05
PTPN4P29074 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
PTPN4P29074 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
PTPN4P29074 SNORA62.1-201ENST00000364287 154 ntBASIC2.26□□□□□ -2.05
PTPN4P29074 RNU6-487P-201ENST00000365430 104 ntBASIC2.26□□□□□ -2.05
PTPN4P29074 RAP1BP3-201ENST00000407180 549 ntBASIC2.26□□□□□ -2.05
PTPN4P29074 RN7SKP223-201ENST00000410582 62 ntBASIC2.26□□□□□ -2.05
PTPN4P29074 RNA5SP270-201ENST00000411361 118 ntBASIC2.26□□□□□ -2.05
PTPN4P29074 RNA5SP111-201ENST00000411386 101 ntBASIC2.26□□□□□ -2.05
PTPN4P29074 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC2.26□□□□□ -2.05
PTPN4P29074 MORF4L1P6-201ENST00000418771 268 ntBASIC2.26□□□□□ -2.05
PTPN4P29074 DPH3P2-201ENST00000422618 250 ntBASIC2.26□□□□□ -2.05
PTPN4P29074 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.26□□□□□ -2.05
PTPN4P29074 AL365400.1-201ENST00000431854 640 ntBASIC2.26□□□□□ -2.05
PTPN4P29074 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.26□□□□□ -2.05
PTPN4P29074 RPL7P12-201ENST00000446719 750 ntBASIC2.26□□□□□ -2.05
PTPN4P29074 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.26□□□□□ -2.05
PTPN4P29074 AL583843.1-201ENST00000456070 346 ntBASIC2.26□□□□□ -2.05
PTPN4P29074 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.26□□□□□ -2.05
PTPN4P29074 AC008526.1-201ENST00000509149 338 ntBASIC2.26□□□□□ -2.05
PTPN4P29074 AF213884.2-201ENST00000510417 903 ntBASIC2.26□□□□□ -2.05
PTPN4P29074 MTND3P5-201ENST00000512798 333 ntBASIC2.26□□□□□ -2.05
PTPN4P29074 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.26□□□□□ -2.05
PTPN4P29074 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.26□□□□□ -2.05
PTPN4P29074 OR5AL2P-201ENST00000532185 920 ntBASIC2.26□□□□□ -2.05
PTPN4P29074 AC079598.5-201ENST00000547460 117 ntBASIC2.26□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 139.3 ms