Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC1.49□□□□□ -2.17
CD28P10747 SNRPFP4-201ENST00000456366 242 ntBASIC1.49□□□□□ -2.17
CD28P10747 AP001025.1-201ENST00000486139 332 ntBASIC1.49□□□□□ -2.17
CD28P10747 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC1.49□□□□□ -2.17
CD28P10747 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.49□□□□□ -2.17
CD28P10747 AC117522.1-201ENST00000509821 380 ntBASIC1.49□□□□□ -2.17
CD28P10747 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC1.49□□□□□ -2.17
CD28P10747 SNORA25.11-201ENST00000515935 105 ntBASIC1.49□□□□□ -2.17
CD28P10747 MIR514B-201ENST00000516774 80 ntBASIC1.49□□□□□ -2.17
CD28P10747 RNU6-685P-201ENST00000517088 95 ntBASIC1.49□□□□□ -2.17
CD28P10747 RNU2-19P-201ENST00000517288 84 ntBASIC1.49□□□□□ -2.17
CD28P10747 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC1.49□□□□□ -2.17
CD28P10747 AC106038.2-201ENST00000520706 568 ntBASIC1.49□□□□□ -2.17
CD28P10747 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.49□□□□□ -2.17
CD28P10747 ADI1P3-201ENST00000549509 470 ntBASIC1.49□□□□□ -2.17
CD28P10747 ZNF321P-202ENST00000550843 495 ntBASIC1.49□□□□□ -2.17
CD28P10747 AC233702.2-202ENST00000562547 291 ntBASIC1.49□□□□□ -2.17
CD28P10747 AC008749.1-201ENST00000597650 306 ntBASIC1.49□□□□□ -2.17
CD28P10747 AC012065.4-201ENST00000602445 679 ntBASIC1.49□□□□□ -2.17
CD28P10747 AL355297.2-201ENST00000604792 129 ntBASIC1.49□□□□□ -2.17
CD28P10747 AC093424.1-201ENST00000604999 338 ntBASIC1.49□□□□□ -2.17
CD28P10747 AC021646.1-201ENST00000605469 484 ntBASIC1.49□□□□□ -2.17
CD28P10747 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC1.49□□□□□ -2.17
CD28P10747 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC1.49□□□□□ -2.17
CD28P10747 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC1.49□□□□□ -2.17
CD28P10747 SCARNA4-202ENST00000625402 129 ntBASIC1.49□□□□□ -2.17
CD28P10747 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
CD28P10747 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.48□□□□□ -2.17
CD28P10747 SNORD114-19-201ENST00000363072 75 ntBASIC1.48□□□□□ -2.17
CD28P10747 RNU6-553P-201ENST00000364047 96 ntBASIC1.48□□□□□ -2.17
CD28P10747 RNU6-371P-201ENST00000364283 108 ntBASIC1.48□□□□□ -2.17
CD28P10747 MIR578-201ENST00000384828 96 ntBASIC1.48□□□□□ -2.17
CD28P10747 AL031577.2-201ENST00000404133 280 ntBASIC1.48□□□□□ -2.17
CD28P10747 Y_RNA.598-201ENST00000410480 95 ntBASIC1.48□□□□□ -2.17
CD28P10747 RNU2-8P-201ENST00000410727 190 ntBASIC1.48□□□□□ -2.17
CD28P10747 RNU6-387P-201ENST00000411331 105 ntBASIC1.48□□□□□ -2.17
CD28P10747 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC1.48□□□□□ -2.17
CD28P10747 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC1.48□□□□□ -2.17
CD28P10747 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC1.48□□□□□ -2.17
CD28P10747 AC009238.1-201ENST00000442165 424 ntBASIC1.48□□□□□ -2.17
CD28P10747 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC1.48□□□□□ -2.17
CD28P10747 AC009237.6-201ENST00000446969 424 ntBASIC1.48□□□□□ -2.17
CD28P10747 snoU13.14-201ENST00000459372 104 ntBASIC1.48□□□□□ -2.17
CD28P10747 HMGB1P30-201ENST00000492455 606 ntBASIC1.48□□□□□ -2.17
CD28P10747 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC1.48□□□□□ -2.17
CD28P10747 RNU6-123P-201ENST00000516163 102 ntBASIC1.48□□□□□ -2.17
CD28P10747 NDUFA5P6-201ENST00000542110 379 ntBASIC1.48□□□□□ -2.17
CD28P10747 IMMP1LP2-201ENST00000552954 492 ntBASIC1.48□□□□□ -2.17
CD28P10747 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC1.48□□□□□ -2.17
CD28P10747 OR11H5P-201ENST00000554039 926 ntBASIC1.48□□□□□ -2.17
CD28P10747 AC008521.1-201ENST00000587471 187 ntBASIC1.48□□□□□ -2.17
CD28P10747 BNIP3P30-201ENST00000601184 574 ntBASIC1.48□□□□□ -2.17
CD28P10747 NDUFA8P1-201ENST00000605525 367 ntBASIC1.48□□□□□ -2.17
CD28P10747 RMST_4.1-201ENST00000616886 107 ntBASIC1.48□□□□□ -2.17
CD28P10747 AC138649.3-201ENST00000622154 254 ntBASIC1.48□□□□□ -2.17
CD28P10747 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.48□□□□□ -2.17
CD28P10747 ATM-228ENST00000639240 498 ntTSL 5 BASIC1.48□□□□□ -2.17
CD28P10747 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
CD28P10747 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
CD28P10747 KPNA2P1-201ENST00000458289 1591 ntBASIC1.47□□□□□ -2.17
CD28P10747 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.47□□□□□ -2.17
CD28P10747 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
CD28P10747 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC1.47□□□□□ -2.17
CD28P10747 RNU6-529P-201ENST00000363383 104 ntBASIC1.47□□□□□ -2.17
CD28P10747 RNU6-169P-201ENST00000365336 107 ntBASIC1.47□□□□□ -2.17
CD28P10747 SNORA25B-201ENST00000365507 128 ntBASIC1.47□□□□□ -2.17
CD28P10747 CISD1P1-201ENST00000393907 327 ntBASIC1.47□□□□□ -2.17
CD28P10747 AL591034.2-201ENST00000402839 359 ntBASIC1.47□□□□□ -2.17
CD28P10747 RNA5SP270-201ENST00000411361 118 ntBASIC1.47□□□□□ -2.17
CD28P10747 ELOCP4-201ENST00000420090 333 ntBASIC1.47□□□□□ -2.17
CD28P10747 MTND2P9-201ENST00000422293 931 ntBASIC1.47□□□□□ -2.17
CD28P10747 MTND4P20-201ENST00000424125 869 ntBASIC1.47□□□□□ -2.17
CD28P10747 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC1.47□□□□□ -2.17
CD28P10747 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC1.47□□□□□ -2.17
CD28P10747 UBE2D3P4-201ENST00000441973 436 ntBASIC1.47□□□□□ -2.17
CD28P10747 CALM1P1-201ENST00000442082 433 ntBASIC1.47□□□□□ -2.17
CD28P10747 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC1.47□□□□□ -2.17
CD28P10747 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC1.47□□□□□ -2.17
CD28P10747 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC1.47□□□□□ -2.17
CD28P10747 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC1.47□□□□□ -2.17
CD28P10747 RNU2-46P-201ENST00000517038 113 ntBASIC1.47□□□□□ -2.17
CD28P10747 RNU6-232P-201ENST00000517144 64 ntBASIC1.47□□□□□ -2.17
CD28P10747 SNORA31.23-201ENST00000517219 133 ntBASIC1.47□□□□□ -2.17
CD28P10747 AC090572.1-201ENST00000519251 160 ntBASIC1.47□□□□□ -2.17
CD28P10747 AC034114.1-201ENST00000520293 285 ntBASIC1.47□□□□□ -2.17
CD28P10747 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC1.47□□□□□ -2.17
CD28P10747 POC1B-211ENST00000549504 581 ntTSL 5 BASIC1.47□□□□□ -2.17
CD28P10747 AC008015.1-201ENST00000555505 465 ntBASIC1.47□□□□□ -2.17
CD28P10747 ANP32BP3-201ENST00000559213 706 ntBASIC1.47□□□□□ -2.17
CD28P10747 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC1.47□□□□□ -2.17
CD28P10747 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC1.47□□□□□ -2.17
CD28P10747 AC073410.2-201ENST00000603240 332 ntBASIC1.47□□□□□ -2.17
CD28P10747 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC1.47□□□□□ -2.17
CD28P10747 AC012360.2-201ENST00000609349 391 ntBASIC1.47□□□□□ -2.17
CD28P10747 MIR8081-201ENST00000611533 95 ntBASIC1.47□□□□□ -2.17
CD28P10747 AC008121.3-201ENST00000618726 433 ntBASIC1.47□□□□□ -2.17
CD28P10747 AL603839.4-201ENST00000624658 1005 ntBASIC1.47□□□□□ -2.17
CD28P10747 AL157786.1-207ENST00000627771 695 ntBASIC1.47□□□□□ -2.17
CD28P10747 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC1.47□□□□□ -2.17
CD28P10747 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.47□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms