Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CSB-PGBD3P0DP91 AL512844.2-201ENST00000433990 593 ntBASIC5.22□□□□□ -1.57
CSB-PGBD3P0DP91 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC5.22□□□□□ -1.57
CSB-PGBD3P0DP91 RPL21P39-201ENST00000463605 483 ntBASIC5.22□□□□□ -1.57
CSB-PGBD3P0DP91 AC109925.1-201ENST00000478069 331 ntBASIC5.22□□□□□ -1.57
CSB-PGBD3P0DP91 AC132942.1-201ENST00000486753 483 ntBASIC5.22□□□□□ -1.57
CSB-PGBD3P0DP91 RPL30P10-201ENST00000488148 337 ntBASIC5.22□□□□□ -1.57
CSB-PGBD3P0DP91 AC093591.1-201ENST00000491435 481 ntBASIC5.22□□□□□ -1.57
CSB-PGBD3P0DP91 RPL21P16-201ENST00000495531 483 ntBASIC5.22□□□□□ -1.57
CSB-PGBD3P0DP91 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CSB-PGBD3P0DP91 RNU2-58P-201ENST00000516403 183 ntBASIC5.22□□□□□ -1.57
CSB-PGBD3P0DP91 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC5.22□□□□□ -1.57
CSB-PGBD3P0DP91 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC5.22□□□□□ -1.57
CSB-PGBD3P0DP91 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC5.22□□□□□ -1.57
CSB-PGBD3P0DP91 AC008121.1-201ENST00000603244 268 ntBASIC5.22□□□□□ -1.57
CSB-PGBD3P0DP91 CENPF-206ENST00000614578 528 ntTSL 5 BASIC5.22□□□□□ -1.57
CSB-PGBD3P0DP91 SMCR2_2.1-201ENST00000619783 161 ntBASIC5.22□□□□□ -1.57
CSB-PGBD3P0DP91 AL365265.1-201ENST00000621045 234 ntBASIC5.22□□□□□ -1.57
CSB-PGBD3P0DP91 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC5.22□□□□□ -1.57
CSB-PGBD3P0DP91 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CSB-PGBD3P0DP91 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC5.22□□□□□ -1.57
CSB-PGBD3P0DP91 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC5.22□□□□□ -1.57
CSB-PGBD3P0DP91 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC5.22□□□□□ -1.57
CSB-PGBD3P0DP91 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
CSB-PGBD3P0DP91 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CSB-PGBD3P0DP91 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CSB-PGBD3P0DP91 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC5.21□□□□□ -1.58
CSB-PGBD3P0DP91 RNU6-827P-201ENST00000365553 106 ntBASIC5.21□□□□□ -1.58
CSB-PGBD3P0DP91 MIR195-201ENST00000385194 87 ntBASIC5.21□□□□□ -1.58
CSB-PGBD3P0DP91 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
CSB-PGBD3P0DP91 PTMAP5-201ENST00000393073 333 ntBASIC5.21□□□□□ -1.58
CSB-PGBD3P0DP91 TMEM167AP1-201ENST00000423409 219 ntBASIC5.21□□□□□ -1.58
CSB-PGBD3P0DP91 BX679664.1-201ENST00000434429 253 ntBASIC5.21□□□□□ -1.58
CSB-PGBD3P0DP91 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC5.21□□□□□ -1.58
CSB-PGBD3P0DP91 RN7SL293P-201ENST00000481765 281 ntBASIC5.21□□□□□ -1.58
CSB-PGBD3P0DP91 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC5.21□□□□□ -1.58
CSB-PGBD3P0DP91 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC5.21□□□□□ -1.58
CSB-PGBD3P0DP91 ZNF192P1-203ENST00000565888 810 ntBASIC5.21□□□□□ -1.58
CSB-PGBD3P0DP91 AC009314.1-201ENST00000603871 304 ntBASIC5.21□□□□□ -1.58
CSB-PGBD3P0DP91 AC006077.1-201ENST00000604746 343 ntBASIC5.21□□□□□ -1.58
CSB-PGBD3P0DP91 AL161629.2-201ENST00000615347 275 ntBASIC5.21□□□□□ -1.58
CSB-PGBD3P0DP91 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC5.21□□□□□ -1.58
CSB-PGBD3P0DP91 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CSB-PGBD3P0DP91 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
CSB-PGBD3P0DP91 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CSB-PGBD3P0DP91 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC5.21□□□□□ -1.58
CSB-PGBD3P0DP91 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CSB-PGBD3P0DP91 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CSB-PGBD3P0DP91 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CSB-PGBD3P0DP91 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC5.2□□□□□ -1.58
CSB-PGBD3P0DP91 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CSB-PGBD3P0DP91 SNORD50.1-201ENST00000362987 71 ntBASIC5.2□□□□□ -1.58
CSB-PGBD3P0DP91 U3.13-201ENST00000364804 214 ntBASIC5.2□□□□□ -1.58
CSB-PGBD3P0DP91 SNORD50.2-201ENST00000365465 70 ntBASIC5.2□□□□□ -1.58
CSB-PGBD3P0DP91 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
CSB-PGBD3P0DP91 AL079342.1-201ENST00000401460 267 ntBASIC5.2□□□□□ -1.58
CSB-PGBD3P0DP91 EIF4EBP2P3-201ENST00000403144 334 ntBASIC5.2□□□□□ -1.58
CSB-PGBD3P0DP91 UBE2Q2P12-201ENST00000414573 204 ntBASIC5.2□□□□□ -1.58
CSB-PGBD3P0DP91 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC5.2□□□□□ -1.58
CSB-PGBD3P0DP91 RPL21P104-201ENST00000464143 478 ntBASIC5.2□□□□□ -1.58
CSB-PGBD3P0DP91 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC5.2□□□□□ -1.58
CSB-PGBD3P0DP91 RNU6-496P-201ENST00000516145 99 ntBASIC5.2□□□□□ -1.58
CSB-PGBD3P0DP91 AC022695.1-201ENST00000522089 237 ntBASIC5.2□□□□□ -1.58
CSB-PGBD3P0DP91 CASP1P1-201ENST00000526345 212 ntBASIC5.2□□□□□ -1.58
CSB-PGBD3P0DP91 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC5.2□□□□□ -1.58
CSB-PGBD3P0DP91 Z83818.1-201ENST00000603584 150 ntBASIC5.2□□□□□ -1.58
CSB-PGBD3P0DP91 AL590240.4-201ENST00000616908 390 ntBASIC5.2□□□□□ -1.58
CSB-PGBD3P0DP91 AC243829.7-201ENST00000633081 225 ntBASIC5.2□□□□□ -1.58
CSB-PGBD3P0DP91 U6.99-201ENST00000637524 83 ntBASIC5.2□□□□□ -1.58
CSB-PGBD3P0DP91 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC5.2□□□□□ -1.58
CSB-PGBD3P0DP91 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC5.2□□□□□ -1.58
CSB-PGBD3P0DP91 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
CSB-PGBD3P0DP91 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CSB-PGBD3P0DP91 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC5.2□□□□□ -1.58
CSB-PGBD3P0DP91 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CSB-PGBD3P0DP91 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC5.19□□□□□ -1.58
CSB-PGBD3P0DP91 AC007685.1-201ENST00000329806 452 ntBASIC5.19□□□□□ -1.58
CSB-PGBD3P0DP91 FTLP6-201ENST00000355274 422 ntBASIC5.19□□□□□ -1.58
CSB-PGBD3P0DP91 SNORD113-8-201ENST00000363497 74 ntBASIC5.19□□□□□ -1.58
CSB-PGBD3P0DP91 RNY4P28-201ENST00000365281 93 ntBASIC5.19□□□□□ -1.58
CSB-PGBD3P0DP91 RNU6-804P-201ENST00000384286 107 ntBASIC5.19□□□□□ -1.58
CSB-PGBD3P0DP91 RNVU1-14-201ENST00000384770 164 ntBASIC5.19□□□□□ -1.58
CSB-PGBD3P0DP91 MIR190B-201ENST00000401119 79 ntBASIC5.19□□□□□ -1.58
CSB-PGBD3P0DP91 RNA5SP239-201ENST00000410218 129 ntBASIC5.19□□□□□ -1.58
CSB-PGBD3P0DP91 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC5.19□□□□□ -1.58
CSB-PGBD3P0DP91 HIGD1AP2-201ENST00000446367 280 ntBASIC5.19□□□□□ -1.58
CSB-PGBD3P0DP91 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC5.19□□□□□ -1.58
CSB-PGBD3P0DP91 U8.22-201ENST00000459141 133 ntBASIC5.19□□□□□ -1.58
CSB-PGBD3P0DP91 AC106707.2-201ENST00000484182 374 ntBASIC5.19□□□□□ -1.58
CSB-PGBD3P0DP91 SNORD116-28-201ENST00000516123 91 ntBASIC5.19□□□□□ -1.58
CSB-PGBD3P0DP91 RNU6-1282P-201ENST00000516735 96 ntBASIC5.19□□□□□ -1.58
CSB-PGBD3P0DP91 AC109479.2-201ENST00000517842 174 ntBASIC5.19□□□□□ -1.58
CSB-PGBD3P0DP91 AC244505.7-201ENST00000599675 272 ntBASIC5.19□□□□□ -1.58
CSB-PGBD3P0DP91 AC009318.2-201ENST00000610917 651 ntBASIC5.19□□□□□ -1.58
CSB-PGBD3P0DP91 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC5.19□□□□□ -1.58
CSB-PGBD3P0DP91 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
CSB-PGBD3P0DP91 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC5.19□□□□□ -1.58
CSB-PGBD3P0DP91 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CSB-PGBD3P0DP91 HSP90AA4P-202ENST00000506915 2228 ntBASIC5.19□□□□□ -1.58
CSB-PGBD3P0DP91 AC118273.1-201ENST00000525324 3006 ntBASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 112.1 ms