Protein–RNA interactions for Protein: P08100

RHO, Rhodopsin, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOP08100 Y_RNA.623-201ENST00000411128 95 ntBASIC3.37□□□□□ -1.87
RHOP08100 AL356968.1-201ENST00000416622 474 ntBASIC3.37□□□□□ -1.87
RHOP08100 YPEL5P1-201ENST00000419731 367 ntBASIC3.37□□□□□ -1.87
RHOP08100 AC243428.1-201ENST00000421099 264 ntBASIC3.37□□□□□ -1.87
RHOP08100 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.37□□□□□ -1.87
RHOP08100 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
RHOP08100 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.37□□□□□ -1.87
RHOP08100 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
RHOP08100 RPS4XP2-201ENST00000458402 793 ntBASIC3.37□□□□□ -1.87
RHOP08100 AC113155.1-201ENST00000511141 769 ntBASIC3.37□□□□□ -1.87
RHOP08100 SCARNA16.2-201ENST00000516520 172 ntBASIC3.37□□□□□ -1.87
RHOP08100 RNA5SP384-201ENST00000516615 116 ntBASIC3.37□□□□□ -1.87
RHOP08100 Y_RNA.720-201ENST00000517166 92 ntBASIC3.37□□□□□ -1.87
RHOP08100 DNAJC8P1-201ENST00000554535 372 ntBASIC3.37□□□□□ -1.87
RHOP08100 AL645944.1-201ENST00000603857 493 ntBASIC3.37□□□□□ -1.87
RHOP08100 AC136601.2-201ENST00000604356 474 ntBASIC3.37□□□□□ -1.87
RHOP08100 AC106900.2-201ENST00000604994 317 ntBASIC3.37□□□□□ -1.87
RHOP08100 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.37□□□□□ -1.87
RHOP08100 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
RHOP08100 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC3.37□□□□□ -1.87
RHOP08100 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
RHOP08100 MTND5P16-201ENST00000460269 1703 ntBASIC3.36□□□□□ -1.87
RHOP08100 AC022336.2-201ENST00000568966 2538 ntBASIC3.36□□□□□ -1.87
RHOP08100 AC091152.2-201ENST00000591628 2569 ntBASIC3.36□□□□□ -1.87
RHOP08100 RNU6-1059P-201ENST00000363752 98 ntBASIC3.36□□□□□ -1.87
RHOP08100 SNORA80A-201ENST00000363922 136 ntBASIC3.36□□□□□ -1.87
RHOP08100 RNU1-115P-201ENST00000365329 160 ntBASIC3.36□□□□□ -1.87
RHOP08100 Y_RNA.510-201ENST00000384511 114 ntBASIC3.36□□□□□ -1.87
RHOP08100 SNORA44-201ENST00000384584 132 ntBASIC3.36□□□□□ -1.87
RHOP08100 MORN2-203ENST00000409131 544 ntTSL 5 BASIC3.36□□□□□ -1.87
RHOP08100 RNU6-55P-201ENST00000411092 107 ntBASIC3.36□□□□□ -1.87
RHOP08100 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.36□□□□□ -1.87
RHOP08100 AC113618.1-201ENST00000416747 285 ntBASIC3.36□□□□□ -1.87
RHOP08100 AC092047.1-201ENST00000424997 240 ntBASIC3.36□□□□□ -1.87
RHOP08100 HMGN2P20-201ENST00000437531 273 ntBASIC3.36□□□□□ -1.87
RHOP08100 SSXP4-201ENST00000451349 245 ntBASIC3.36□□□□□ -1.87
RHOP08100 CECR9-201ENST00000453421 199 ntBASIC3.36□□□□□ -1.87
RHOP08100 PCMTD1P1-201ENST00000455560 355 ntBASIC3.36□□□□□ -1.87
RHOP08100 AL583843.1-201ENST00000456070 346 ntBASIC3.36□□□□□ -1.87
RHOP08100 AL135752.1-201ENST00000479477 471 ntBASIC3.36□□□□□ -1.87
RHOP08100 RPL30P5-201ENST00000494923 336 ntBASIC3.36□□□□□ -1.87
RHOP08100 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.36□□□□□ -1.87
RHOP08100 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC3.36□□□□□ -1.87
RHOP08100 RNU6-1046P-201ENST00000516538 107 ntBASIC3.36□□□□□ -1.87
RHOP08100 AC023442.1-201ENST00000531247 422 ntBASIC3.36□□□□□ -1.87
RHOP08100 AP002404.1-201ENST00000532005 451 ntBASIC3.36□□□□□ -1.87
RHOP08100 TRAV32-201ENST00000553993 340 ntBASIC3.36□□□□□ -1.87
RHOP08100 AC109446.1-201ENST00000566172 220 ntBASIC3.36□□□□□ -1.87
RHOP08100 MIR5047-201ENST00000579212 100 ntBASIC3.36□□□□□ -1.87
RHOP08100 CPDP1-201ENST00000579660 283 ntBASIC3.36□□□□□ -1.87
RHOP08100 MIR4680-201ENST00000580906 66 ntBASIC3.36□□□□□ -1.87
RHOP08100 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.36□□□□□ -1.87
RHOP08100 XIST_intron.1-201ENST00000619444 68 ntBASIC3.36□□□□□ -1.87
RHOP08100 AC058791.1-201ENST00000608412 3198 ntBASIC3.36□□□□□ -1.87
RHOP08100 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.35□□□□□ -1.87
RHOP08100 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.35□□□□□ -1.87
RHOP08100 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.35□□□□□ -1.87
RHOP08100 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.35□□□□□ -1.87
RHOP08100 Y_RNA.80-201ENST00000362996 102 ntBASIC3.35□□□□□ -1.87
RHOP08100 Y_RNA.133-201ENST00000363428 110 ntBASIC3.35□□□□□ -1.87
RHOP08100 Y_RNA.144-201ENST00000363521 113 ntBASIC3.35□□□□□ -1.87
RHOP08100 Y_RNA.459-201ENST00000384251 102 ntBASIC3.35□□□□□ -1.87
RHOP08100 RNY1P14-201ENST00000384426 108 ntBASIC3.35□□□□□ -1.87
RHOP08100 Y_RNA.496-201ENST00000384444 101 ntBASIC3.35□□□□□ -1.87
RHOP08100 MIR591-201ENST00000385290 95 ntBASIC3.35□□□□□ -1.87
RHOP08100 MRPL42P3-201ENST00000401492 326 ntBASIC3.35□□□□□ -1.87
RHOP08100 RNU6-174P-201ENST00000410406 106 ntBASIC3.35□□□□□ -1.87
RHOP08100 RNU2-68P-201ENST00000410878 191 ntBASIC3.35□□□□□ -1.87
RHOP08100 AC008267.5-201ENST00000424928 265 ntBASIC3.35□□□□□ -1.87
RHOP08100 AL358176.2-201ENST00000425769 204 ntBASIC3.35□□□□□ -1.87
RHOP08100 ARF4P2-201ENST00000430209 526 ntBASIC3.35□□□□□ -1.87
RHOP08100 SNRPEP4-201ENST00000435815 279 ntBASIC3.35□□□□□ -1.87
RHOP08100 NDUFB4P6-201ENST00000436819 366 ntBASIC3.35□□□□□ -1.87
RHOP08100 AC011816.1-201ENST00000441346 546 ntBASIC3.35□□□□□ -1.87
RHOP08100 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC3.35□□□□□ -1.87
RHOP08100 FTH1P25-201ENST00000447665 469 ntBASIC3.35□□□□□ -1.87
RHOP08100 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.35□□□□□ -1.87
RHOP08100 AC018437.1-201ENST00000492214 406 ntBASIC3.35□□□□□ -1.87
RHOP08100 AC097462.2-201ENST00000504623 481 ntBASIC3.35□□□□□ -1.87
RHOP08100 AC008885.1-201ENST00000514930 301 ntBASIC3.35□□□□□ -1.87
RHOP08100 SNORA25.10-201ENST00000515926 124 ntBASIC3.35□□□□□ -1.87
RHOP08100 RNU6-1137P-201ENST00000517073 99 ntBASIC3.35□□□□□ -1.87
RHOP08100 SNORA31.19-201ENST00000517079 126 ntBASIC3.35□□□□□ -1.87
RHOP08100 RNA5SP165-201ENST00000517142 115 ntBASIC3.35□□□□□ -1.87
RHOP08100 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC3.35□□□□□ -1.87
RHOP08100 AC025755.1-201ENST00000521306 278 ntBASIC3.35□□□□□ -1.87
RHOP08100 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC3.35□□□□□ -1.87
RHOP08100 MIR4738-201ENST00000579134 87 ntBASIC3.35□□□□□ -1.87
RHOP08100 UBL5P2-201ENST00000583788 219 ntBASIC3.35□□□□□ -1.87
RHOP08100 AC093732.2-201ENST00000607950 274 ntBASIC3.35□□□□□ -1.87
RHOP08100 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC3.35□□□□□ -1.87
RHOP08100 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.35□□□□□ -1.87
RHOP08100 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.35□□□□□ -1.87
RHOP08100 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
RHOP08100 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
RHOP08100 MTND4P1-201ENST00000457501 1466 ntBASIC3.35□□□□□ -1.87
RHOP08100 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
RHOP08100 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.34□□□□□ -1.87
RHOP08100 Y_RNA.2-201ENST00000362330 96 ntBASIC3.34□□□□□ -1.87
RHOP08100 SNORA7.4-201ENST00000384249 137 ntBASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms