Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.6□□□□□ -1.83
HLA-DOAP06340 RPL37P6-201ENST00000460682 294 ntBASIC3.6□□□□□ -1.83
HLA-DOAP06340 AC087588.1-201ENST00000462203 316 ntBASIC3.6□□□□□ -1.83
HLA-DOAP06340 SCARNA15.2-201ENST00000516409 127 ntBASIC3.6□□□□□ -1.83
HLA-DOAP06340 SCARNA20.6-201ENST00000517251 106 ntBASIC3.6□□□□□ -1.83
HLA-DOAP06340 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC3.6□□□□□ -1.83
HLA-DOAP06340 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.6□□□□□ -1.83
HLA-DOAP06340 AC109446.1-201ENST00000566172 220 ntBASIC3.6□□□□□ -1.83
HLA-DOAP06340 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.6□□□□□ -1.83
HLA-DOAP06340 LRRC37A5P-203ENST00000580181 585 ntBASIC3.6□□□□□ -1.83
HLA-DOAP06340 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC3.6□□□□□ -1.83
HLA-DOAP06340 MIR5692A1-201ENST00000580523 69 ntBASIC3.6□□□□□ -1.83
HLA-DOAP06340 AC092447.9-201ENST00000603395 144 ntBASIC3.6□□□□□ -1.83
HLA-DOAP06340 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.6□□□□□ -1.83
HLA-DOAP06340 SNORD58B-201ENST00000607313 66 ntBASIC3.6□□□□□ -1.83
HLA-DOAP06340 AP002826.1-201ENST00000608835 315 ntBASIC3.6□□□□□ -1.83
HLA-DOAP06340 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
HLA-DOAP06340 AC009487.2-201ENST00000420969 6821 ntBASIC3.6□□□□□ -1.83
HLA-DOAP06340 SDAD1P2-201ENST00000441308 2028 ntBASIC3.6□□□□□ -1.83
HLA-DOAP06340 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.59□□□□□ -1.83
HLA-DOAP06340 RNU1-75P-201ENST00000347264 129 ntBASIC3.59□□□□□ -1.83
HLA-DOAP06340 RNU6-490P-201ENST00000362985 107 ntBASIC3.59□□□□□ -1.83
HLA-DOAP06340 RNU6-238P-201ENST00000363313 106 ntBASIC3.59□□□□□ -1.83
HLA-DOAP06340 RNY3P11-201ENST00000364153 102 ntBASIC3.59□□□□□ -1.83
HLA-DOAP06340 SNORA7.2-201ENST00000364446 145 ntBASIC3.59□□□□□ -1.83
HLA-DOAP06340 SET-203ENST00000372688 801 ntTSL 2 BASIC3.59□□□□□ -1.83
HLA-DOAP06340 RNU6-907P-201ENST00000390924 102 ntBASIC3.59□□□□□ -1.83
HLA-DOAP06340 EEF1A1P41-201ENST00000414667 207 ntBASIC3.59□□□□□ -1.83
HLA-DOAP06340 RPL32P35-201ENST00000415214 394 ntBASIC3.59□□□□□ -1.83
HLA-DOAP06340 UBE2D3P2-201ENST00000424409 445 ntBASIC3.59□□□□□ -1.83
HLA-DOAP06340 AL353997.1-201ENST00000432936 108 ntBASIC3.59□□□□□ -1.83
HLA-DOAP06340 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC3.59□□□□□ -1.83
HLA-DOAP06340 U8.20-201ENST00000459445 131 ntBASIC3.59□□□□□ -1.83
HLA-DOAP06340 AC128713.1-201ENST00000471495 306 ntBASIC3.59□□□□□ -1.83
HLA-DOAP06340 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC3.59□□□□□ -1.83
HLA-DOAP06340 RPS15AP34-201ENST00000487776 387 ntBASIC3.59□□□□□ -1.83
HLA-DOAP06340 AC105758.1-201ENST00000506038 399 ntBASIC3.59□□□□□ -1.83
HLA-DOAP06340 RNA5SP217-201ENST00000515959 91 ntBASIC3.59□□□□□ -1.83
HLA-DOAP06340 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.59□□□□□ -1.83
HLA-DOAP06340 AC113195.1-201ENST00000579952 141 ntBASIC3.59□□□□□ -1.83
HLA-DOAP06340 OR1M4P-201ENST00000589199 287 ntBASIC3.59□□□□□ -1.83
HLA-DOAP06340 AL355598.1-201ENST00000604169 202 ntBASIC3.59□□□□□ -1.83
HLA-DOAP06340 AF117829.1-206ENST00000621883 3802 ntBASIC3.59□□□□□ -1.83
HLA-DOAP06340 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.59□□□□□ -1.83
HLA-DOAP06340 ZNF72P-201ENST00000425869 1908 ntBASIC3.59□□□□□ -1.83
HLA-DOAP06340 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC3.59□□□□□ -1.83
HLA-DOAP06340 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
HLA-DOAP06340 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
HLA-DOAP06340 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
HLA-DOAP06340 MIR423-201ENST00000362201 94 ntBASIC3.58□□□□□ -1.84
HLA-DOAP06340 Y_RNA.324-201ENST00000365165 102 ntBASIC3.58□□□□□ -1.84
HLA-DOAP06340 AC117470.1-201ENST00000381974 330 ntBASIC3.58□□□□□ -1.84
HLA-DOAP06340 Y_RNA.452-201ENST00000384202 108 ntBASIC3.58□□□□□ -1.84
HLA-DOAP06340 Y_RNA.480-201ENST00000384364 102 ntBASIC3.58□□□□□ -1.84
HLA-DOAP06340 Z98941.1-201ENST00000407764 100 ntBASIC3.58□□□□□ -1.84
HLA-DOAP06340 RHEBP3-201ENST00000411920 351 ntBASIC3.58□□□□□ -1.84
HLA-DOAP06340 HNRNPDLP1-201ENST00000412834 550 ntBASIC3.58□□□□□ -1.84
HLA-DOAP06340 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC3.58□□□□□ -1.84
HLA-DOAP06340 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.58□□□□□ -1.84
HLA-DOAP06340 AL353621.1-201ENST00000418219 243 ntBASIC3.58□□□□□ -1.84
HLA-DOAP06340 UBE2V1P4-201ENST00000425374 344 ntBASIC3.58□□□□□ -1.84
HLA-DOAP06340 AL645568.3-201ENST00000433683 316 ntBASIC3.58□□□□□ -1.84
HLA-DOAP06340 VDAC1P3-201ENST00000434069 851 ntBASIC3.58□□□□□ -1.84
HLA-DOAP06340 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.58□□□□□ -1.84
HLA-DOAP06340 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC3.58□□□□□ -1.84
HLA-DOAP06340 CHEK2P4-201ENST00000450340 246 ntBASIC3.58□□□□□ -1.84
HLA-DOAP06340 AL353752.1-201ENST00000454946 260 ntBASIC3.58□□□□□ -1.84
HLA-DOAP06340 AC117440.1-201ENST00000474107 571 ntBASIC3.58□□□□□ -1.84
HLA-DOAP06340 FO393415.2-201ENST00000480085 343 ntBASIC3.58□□□□□ -1.84
HLA-DOAP06340 AC113155.1-201ENST00000511141 769 ntBASIC3.58□□□□□ -1.84
HLA-DOAP06340 RNU4-77P-201ENST00000516692 156 ntBASIC3.58□□□□□ -1.84
HLA-DOAP06340 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.58□□□□□ -1.84
HLA-DOAP06340 AC110588.1-201ENST00000559699 137 ntBASIC3.58□□□□□ -1.84
HLA-DOAP06340 MIR3921-201ENST00000577308 85 ntBASIC3.58□□□□□ -1.84
HLA-DOAP06340 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC3.58□□□□□ -1.84
HLA-DOAP06340 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.58□□□□□ -1.84
HLA-DOAP06340 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.58□□□□□ -1.84
HLA-DOAP06340 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
HLA-DOAP06340 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
HLA-DOAP06340 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.58□□□□□ -1.84
HLA-DOAP06340 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
HLA-DOAP06340 RNU6-384P-201ENST00000364900 104 ntBASIC3.57□□□□□ -1.84
HLA-DOAP06340 Y_RNA.455-201ENST00000384230 98 ntBASIC3.57□□□□□ -1.84
HLA-DOAP06340 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
HLA-DOAP06340 AC114482.1-201ENST00000418010 247 ntBASIC3.57□□□□□ -1.84
HLA-DOAP06340 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC3.57□□□□□ -1.84
HLA-DOAP06340 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.57□□□□□ -1.84
HLA-DOAP06340 SETP5-201ENST00000437270 562 ntBASIC3.57□□□□□ -1.84
HLA-DOAP06340 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.57□□□□□ -1.84
HLA-DOAP06340 PIGFP3-201ENST00000441918 722 ntBASIC3.57□□□□□ -1.84
HLA-DOAP06340 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.57□□□□□ -1.84
HLA-DOAP06340 CECR9-201ENST00000453421 199 ntBASIC3.57□□□□□ -1.84
HLA-DOAP06340 AC006539.3-201ENST00000454258 129 ntBASIC3.57□□□□□ -1.84
HLA-DOAP06340 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.57□□□□□ -1.84
HLA-DOAP06340 RPL9P32-201ENST00000464118 620 ntBASIC3.57□□□□□ -1.84
HLA-DOAP06340 RPS23P3-201ENST00000470993 430 ntBASIC3.57□□□□□ -1.84
HLA-DOAP06340 KC877373.1-201ENST00000479066 408 ntBASIC3.57□□□□□ -1.84
HLA-DOAP06340 RPS4XP13-201ENST00000483219 789 ntBASIC3.57□□□□□ -1.84
HLA-DOAP06340 AC083906.5-201ENST00000503722 328 ntBASIC3.57□□□□□ -1.84
HLA-DOAP06340 RNU6-143P-201ENST00000516942 93 ntBASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms