Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 RNA5SP100-201ENST00000410903 110 ntBASIC1.15□□□□□ -2.23
HLA-DQB2P05538 RNA5SP59-201ENST00000410922 110 ntBASIC1.15□□□□□ -2.23
HLA-DQB2P05538 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.15□□□□□ -2.23
HLA-DQB2P05538 VPS26BP1-201ENST00000417155 755 ntBASIC1.15□□□□□ -2.23
HLA-DQB2P05538 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC1.15□□□□□ -2.23
HLA-DQB2P05538 AL591704.2-201ENST00000421658 181 ntBASIC1.15□□□□□ -2.23
HLA-DQB2P05538 USP9YP18-201ENST00000425912 695 ntBASIC1.15□□□□□ -2.23
HLA-DQB2P05538 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC1.15□□□□□ -2.23
HLA-DQB2P05538 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC1.15□□□□□ -2.23
HLA-DQB2P05538 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC1.15□□□□□ -2.23
HLA-DQB2P05538 TIMM9P1-201ENST00000436122 256 ntBASIC1.15□□□□□ -2.23
HLA-DQB2P05538 SNRPFP4-201ENST00000456366 242 ntBASIC1.15□□□□□ -2.23
HLA-DQB2P05538 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.15□□□□□ -2.23
HLA-DQB2P05538 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.15□□□□□ -2.23
HLA-DQB2P05538 RN7SKP256-201ENST00000517201 314 ntBASIC1.15□□□□□ -2.23
HLA-DQB2P05538 AP003168.1-201ENST00000530091 307 ntBASIC1.15□□□□□ -2.23
HLA-DQB2P05538 AP000907.2-201ENST00000530827 353 ntBASIC1.15□□□□□ -2.23
HLA-DQB2P05538 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC1.15□□□□□ -2.23
HLA-DQB2P05538 MIR1273C-201ENST00000578669 77 ntBASIC1.15□□□□□ -2.23
HLA-DQB2P05538 AL670379.6-201ENST00000603753 252 ntBASIC1.15□□□□□ -2.23
HLA-DQB2P05538 AL670379.11-201ENST00000604059 253 ntBASIC1.15□□□□□ -2.23
HLA-DQB2P05538 AC008162.1-201ENST00000604718 254 ntBASIC1.15□□□□□ -2.23
HLA-DQB2P05538 AL670379.1-201ENST00000604752 252 ntBASIC1.15□□□□□ -2.23
HLA-DQB2P05538 AL670379.5-201ENST00000605253 252 ntBASIC1.15□□□□□ -2.23
HLA-DQB2P05538 AL670379.12-201ENST00000605291 253 ntBASIC1.15□□□□□ -2.23
HLA-DQB2P05538 AL670379.8-201ENST00000605353 252 ntBASIC1.15□□□□□ -2.23
HLA-DQB2P05538 AL670379.7-201ENST00000605823 252 ntBASIC1.15□□□□□ -2.23
HLA-DQB2P05538 MIR6078-201ENST00000611069 100 ntBASIC1.15□□□□□ -2.23
HLA-DQB2P05538 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.15□□□□□ -2.23
HLA-DQB2P05538 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.15□□□□□ -2.23
HLA-DQB2P05538 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
HLA-DQB2P05538 Y_RNA.33-201ENST00000362591 102 ntBASIC1.14□□□□□ -2.23
HLA-DQB2P05538 Y_RNA.192-201ENST00000363977 102 ntBASIC1.14□□□□□ -2.23
HLA-DQB2P05538 RNU6-944P-201ENST00000364023 107 ntBASIC1.14□□□□□ -2.23
HLA-DQB2P05538 RNU6-53P-201ENST00000365367 106 ntBASIC1.14□□□□□ -2.23
HLA-DQB2P05538 SMIM11P1-201ENST00000369586 178 ntBASIC1.14□□□□□ -2.23
HLA-DQB2P05538 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC1.14□□□□□ -2.23
HLA-DQB2P05538 RNU6-769P-201ENST00000384407 104 ntBASIC1.14□□□□□ -2.23
HLA-DQB2P05538 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.14□□□□□ -2.23
HLA-DQB2P05538 MIR1285-1-201ENST00000408593 84 ntBASIC1.14□□□□□ -2.23
HLA-DQB2P05538 AC069282.1-201ENST00000411911 526 ntBASIC1.14□□□□□ -2.23
HLA-DQB2P05538 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC1.14□□□□□ -2.23
HLA-DQB2P05538 AL591212.2-201ENST00000433923 257 ntBASIC1.14□□□□□ -2.23
HLA-DQB2P05538 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC1.14□□□□□ -2.23
HLA-DQB2P05538 AL163540.1-201ENST00000485382 386 ntBASIC1.14□□□□□ -2.23
HLA-DQB2P05538 AP001025.1-201ENST00000486139 332 ntBASIC1.14□□□□□ -2.23
HLA-DQB2P05538 RN7SKP179-201ENST00000516126 217 ntBASIC1.14□□□□□ -2.23
HLA-DQB2P05538 MTND4LP25-201ENST00000570218 163 ntBASIC1.14□□□□□ -2.23
HLA-DQB2P05538 MTCYBP33-201ENST00000575007 1130 ntBASIC1.14□□□□□ -2.23
HLA-DQB2P05538 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC1.14□□□□□ -2.23
HLA-DQB2P05538 CYP2C61P-201ENST00000604072 290 ntBASIC1.14□□□□□ -2.23
HLA-DQB2P05538 AL670379.2-201ENST00000604983 252 ntBASIC1.14□□□□□ -2.23
HLA-DQB2P05538 AL670379.4-201ENST00000605279 254 ntBASIC1.14□□□□□ -2.23
HLA-DQB2P05538 AL022345.1-201ENST00000607292 135 ntBASIC1.14□□□□□ -2.23
HLA-DQB2P05538 AC022893.3-201ENST00000607665 437 ntBASIC1.14□□□□□ -2.23
HLA-DQB2P05538 AC097468.3-201ENST00000607956 456 ntBASIC1.14□□□□□ -2.23
HLA-DQB2P05538 AL589994.2-201ENST00000621124 579 ntBASIC1.14□□□□□ -2.23
HLA-DQB2P05538 AC093648.1-201ENST00000623546 606 ntBASIC1.14□□□□□ -2.23
HLA-DQB2P05538 AP003476.1-201ENST00000623984 516 ntBASIC1.14□□□□□ -2.23
HLA-DQB2P05538 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC1.14□□□□□ -2.23
HLA-DQB2P05538 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.13□□□□□ -2.23
HLA-DQB2P05538 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.13□□□□□ -2.23
HLA-DQB2P05538 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
HLA-DQB2P05538 RNU6-655P-201ENST00000362858 107 ntBASIC1.13□□□□□ -2.23
HLA-DQB2P05538 RNU6-743P-201ENST00000364151 106 ntBASIC1.13□□□□□ -2.23
HLA-DQB2P05538 Y_RNA.327-201ENST00000365201 102 ntBASIC1.13□□□□□ -2.23
HLA-DQB2P05538 SNORD116-12-201ENST00000384468 92 ntBASIC1.13□□□□□ -2.23
HLA-DQB2P05538 MIR150-201ENST00000385048 84 ntBASIC1.13□□□□□ -2.23
HLA-DQB2P05538 CBX3P9-201ENST00000402326 552 ntBASIC1.13□□□□□ -2.23
HLA-DQB2P05538 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.13□□□□□ -2.23
HLA-DQB2P05538 UBE2V1P10-201ENST00000414685 269 ntBASIC1.13□□□□□ -2.23
HLA-DQB2P05538 RPL30P13-201ENST00000418873 348 ntBASIC1.13□□□□□ -2.23
HLA-DQB2P05538 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC1.13□□□□□ -2.23
HLA-DQB2P05538 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.13□□□□□ -2.23
HLA-DQB2P05538 snoU13.14-201ENST00000459372 104 ntBASIC1.13□□□□□ -2.23
HLA-DQB2P05538 AC005908.1-201ENST00000468701 347 ntBASIC1.13□□□□□ -2.23
HLA-DQB2P05538 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
HLA-DQB2P05538 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.13□□□□□ -2.23
HLA-DQB2P05538 RNU6-965P-201ENST00000516721 96 ntBASIC1.13□□□□□ -2.23
HLA-DQB2P05538 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC1.13□□□□□ -2.23
HLA-DQB2P05538 AC092325.1-201ENST00000566449 554 ntBASIC1.13□□□□□ -2.23
HLA-DQB2P05538 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.13□□□□□ -2.23
HLA-DQB2P05538 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC1.13□□□□□ -2.23
HLA-DQB2P05538 VN1R82P-201ENST00000601481 356 ntBASIC1.13□□□□□ -2.23
HLA-DQB2P05538 AP001485.1-201ENST00000604799 199 ntBASIC1.13□□□□□ -2.23
HLA-DQB2P05538 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.13□□□□□ -2.23
HLA-DQB2P05538 CBX3P1-201ENST00000325243 554 ntBASIC1.12□□□□□ -2.23
HLA-DQB2P05538 MIR26B-201ENST00000362251 77 ntBASIC1.12□□□□□ -2.23
HLA-DQB2P05538 RNU6-439P-201ENST00000384188 106 ntBASIC1.12□□□□□ -2.23
HLA-DQB2P05538 RNU2-36P-201ENST00000410361 191 ntBASIC1.12□□□□□ -2.23
HLA-DQB2P05538 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1.12□□□□□ -2.23
HLA-DQB2P05538 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC1.12□□□□□ -2.23
HLA-DQB2P05538 HMGN2P18-201ENST00000450680 270 ntBASIC1.12□□□□□ -2.23
HLA-DQB2P05538 AC012308.1-201ENST00000451232 178 ntBASIC1.12□□□□□ -2.23
HLA-DQB2P05538 HMGB1P30-201ENST00000492455 606 ntBASIC1.12□□□□□ -2.23
HLA-DQB2P05538 AC116353.3-201ENST00000511215 249 ntBASIC1.12□□□□□ -2.23
HLA-DQB2P05538 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.12□□□□□ -2.23
HLA-DQB2P05538 RNVU1-2-201ENST00000516326 135 ntBASIC1.12□□□□□ -2.23
HLA-DQB2P05538 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1.12□□□□□ -2.23
HLA-DQB2P05538 AC010376.1-201ENST00000522101 334 ntBASIC1.12□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms