Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 RNU1-48P-201ENST00000516400 162 ntBASIC1.69□□□□□ -2.14
HLA-DPB1P04440 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC1.69□□□□□ -2.14
HLA-DPB1P04440 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC1.69□□□□□ -2.14
HLA-DPB1P04440 MIR3122-201ENST00000577243 73 ntBASIC1.69□□□□□ -2.14
HLA-DPB1P04440 AC073539.2-201ENST00000597113 165 ntBASIC1.69□□□□□ -2.14
HLA-DPB1P04440 AC064872.1-201ENST00000604823 1072 ntBASIC1.69□□□□□ -2.14
HLA-DPB1P04440 AC068276.1-201ENST00000605793 379 ntBASIC1.69□□□□□ -2.14
HLA-DPB1P04440 RNU6-91P-201ENST00000607774 107 ntBASIC1.69□□□□□ -2.14
HLA-DPB1P04440 AC022202.1-201ENST00000613515 211 ntBASIC1.69□□□□□ -2.14
HLA-DPB1P04440 AP001506.1-201ENST00000615444 211 ntBASIC1.69□□□□□ -2.14
HLA-DPB1P04440 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC1.69□□□□□ -2.14
HLA-DPB1P04440 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.69□□□□□ -2.14
HLA-DPB1P04440 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
HLA-DPB1P04440 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
HLA-DPB1P04440 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.68□□□□□ -2.14
HLA-DPB1P04440 FGF7P2-201ENST00000332473 296 ntBASIC1.68□□□□□ -2.14
HLA-DPB1P04440 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
HLA-DPB1P04440 U3.4-201ENST00000363352 213 ntBASIC1.68□□□□□ -2.14
HLA-DPB1P04440 SNORA16.1-201ENST00000364597 132 ntBASIC1.68□□□□□ -2.14
HLA-DPB1P04440 SNORA16B-201ENST00000364674 135 ntBASIC1.68□□□□□ -2.14
HLA-DPB1P04440 RNU6-74P-201ENST00000384235 107 ntBASIC1.68□□□□□ -2.14
HLA-DPB1P04440 RNU6-843P-201ENST00000384454 104 ntBASIC1.68□□□□□ -2.14
HLA-DPB1P04440 RNY3P10-201ENST00000384764 102 ntBASIC1.68□□□□□ -2.14
HLA-DPB1P04440 RNU2-20P-201ENST00000410425 191 ntBASIC1.68□□□□□ -2.14
HLA-DPB1P04440 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC1.68□□□□□ -2.14
HLA-DPB1P04440 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC1.68□□□□□ -2.14
HLA-DPB1P04440 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC1.68□□□□□ -2.14
HLA-DPB1P04440 MTCYBP5-201ENST00000423752 1135 ntBASIC1.68□□□□□ -2.14
HLA-DPB1P04440 AIMP1P2-201ENST00000425294 312 ntBASIC1.68□□□□□ -2.14
HLA-DPB1P04440 AC092447.3-201ENST00000426027 686 ntBASIC1.68□□□□□ -2.14
HLA-DPB1P04440 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC1.68□□□□□ -2.14
HLA-DPB1P04440 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC1.68□□□□□ -2.14
HLA-DPB1P04440 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC1.68□□□□□ -2.14
HLA-DPB1P04440 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.68□□□□□ -2.14
HLA-DPB1P04440 AL136380.1-201ENST00000447970 162 ntBASIC1.68□□□□□ -2.14
HLA-DPB1P04440 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.68□□□□□ -2.14
HLA-DPB1P04440 RPS27AP8-201ENST00000452665 445 ntBASIC1.68□□□□□ -2.14
HLA-DPB1P04440 AL162395.1-201ENST00000457882 422 ntBASIC1.68□□□□□ -2.14
HLA-DPB1P04440 SNORD42A-201ENST00000459584 64 ntBASIC1.68□□□□□ -2.14
HLA-DPB1P04440 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC1.68□□□□□ -2.14
HLA-DPB1P04440 AP001025.1-201ENST00000486139 332 ntBASIC1.68□□□□□ -2.14
HLA-DPB1P04440 HMGB1P30-201ENST00000492455 606 ntBASIC1.68□□□□□ -2.14
HLA-DPB1P04440 MTND3P25-201ENST00000509243 135 ntBASIC1.68□□□□□ -2.14
HLA-DPB1P04440 SNORA18.6-201ENST00000516792 115 ntBASIC1.68□□□□□ -2.14
HLA-DPB1P04440 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC1.68□□□□□ -2.14
HLA-DPB1P04440 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.68□□□□□ -2.14
HLA-DPB1P04440 AP004607.1-201ENST00000524456 203 ntBASIC1.68□□□□□ -2.14
HLA-DPB1P04440 RANP3-201ENST00000530970 276 ntBASIC1.68□□□□□ -2.14
HLA-DPB1P04440 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC1.68□□□□□ -2.14
HLA-DPB1P04440 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC1.68□□□□□ -2.14
HLA-DPB1P04440 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC1.68□□□□□ -2.14
HLA-DPB1P04440 AC137800.2-201ENST00000574375 120 ntBASIC1.68□□□□□ -2.14
HLA-DPB1P04440 AC098848.2-201ENST00000588023 330 ntBASIC1.68□□□□□ -2.14
HLA-DPB1P04440 AC021646.1-201ENST00000605469 484 ntBASIC1.68□□□□□ -2.14
HLA-DPB1P04440 U6.42-201ENST00000618440 107 ntBASIC1.68□□□□□ -2.14
HLA-DPB1P04440 YWHAEP7-203ENST00000622054 312 ntBASIC1.68□□□□□ -2.14
HLA-DPB1P04440 AP000770.2-201ENST00000623694 100 ntBASIC1.68□□□□□ -2.14
HLA-DPB1P04440 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC1.68□□□□□ -2.14
HLA-DPB1P04440 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC1.68□□□□□ -2.14
HLA-DPB1P04440 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.68□□□□□ -2.14
HLA-DPB1P04440 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC1.68□□□□□ -2.14
HLA-DPB1P04440 KPNA2P1-201ENST00000458289 1591 ntBASIC1.68□□□□□ -2.14
HLA-DPB1P04440 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC1.67□□□□□ -2.14
HLA-DPB1P04440 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC1.67□□□□□ -2.14
HLA-DPB1P04440 AC138393.1-203ENST00000327086 343 ntBASIC1.67□□□□□ -2.14
HLA-DPB1P04440 RNU1-23P-201ENST00000363361 144 ntBASIC1.67□□□□□ -2.14
HLA-DPB1P04440 SNORA62.1-201ENST00000364287 154 ntBASIC1.67□□□□□ -2.14
HLA-DPB1P04440 RNU6-282P-201ENST00000365357 103 ntBASIC1.67□□□□□ -2.14
HLA-DPB1P04440 RNU6-116P-201ENST00000384042 109 ntBASIC1.67□□□□□ -2.14
HLA-DPB1P04440 SNORD116-20-201ENST00000384529 92 ntBASIC1.67□□□□□ -2.14
HLA-DPB1P04440 MIR1-2-201ENST00000384961 85 ntBASIC1.67□□□□□ -2.14
HLA-DPB1P04440 GSTA9P-201ENST00000406231 611 ntBASIC1.67□□□□□ -2.14
HLA-DPB1P04440 MIR1302-8-201ENST00000408342 128 ntBASIC1.67□□□□□ -2.14
HLA-DPB1P04440 MORN2-203ENST00000409131 544 ntTSL 5 BASIC1.67□□□□□ -2.14
HLA-DPB1P04440 RNU4-26P-201ENST00000410270 107 ntBASIC1.67□□□□□ -2.14
HLA-DPB1P04440 UBE2V1P10-201ENST00000414685 269 ntBASIC1.67□□□□□ -2.14
HLA-DPB1P04440 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC1.67□□□□□ -2.14
HLA-DPB1P04440 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC1.67□□□□□ -2.14
HLA-DPB1P04440 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC1.67□□□□□ -2.14
HLA-DPB1P04440 RPS6P15-201ENST00000431996 751 ntBASIC1.67□□□□□ -2.14
HLA-DPB1P04440 AC104058.1-201ENST00000448028 297 ntBASIC1.67□□□□□ -2.14
HLA-DPB1P04440 snoU109.1-201ENST00000459339 135 ntBASIC1.67□□□□□ -2.14
HLA-DPB1P04440 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC1.67□□□□□ -2.14
HLA-DPB1P04440 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC1.67□□□□□ -2.14
HLA-DPB1P04440 AC092436.1-201ENST00000506450 503 ntBASIC1.67□□□□□ -2.14
HLA-DPB1P04440 AC104806.1-201ENST00000508720 308 ntBASIC1.67□□□□□ -2.14
HLA-DPB1P04440 AC091965.2-201ENST00000512324 613 ntBASIC1.67□□□□□ -2.14
HLA-DPB1P04440 MTCO3P28-201ENST00000513351 515 ntBASIC1.67□□□□□ -2.14
HLA-DPB1P04440 SNORA31.23-201ENST00000517219 133 ntBASIC1.67□□□□□ -2.14
HLA-DPB1P04440 OR5AL2P-201ENST00000532185 920 ntBASIC1.67□□□□□ -2.14
HLA-DPB1P04440 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC1.67□□□□□ -2.14
HLA-DPB1P04440 BNIP3P6-201ENST00000549284 499 ntBASIC1.67□□□□□ -2.14
HLA-DPB1P04440 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC1.67□□□□□ -2.14
HLA-DPB1P04440 MIR3682-201ENST00000581338 84 ntBASIC1.67□□□□□ -2.14
HLA-DPB1P04440 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
HLA-DPB1P04440 SEPT7P9-203ENST00000604116 343 ntBASIC1.67□□□□□ -2.14
HLA-DPB1P04440 Z94722.1-201ENST00000604328 474 ntBASIC1.67□□□□□ -2.14
HLA-DPB1P04440 AL355297.2-201ENST00000604792 129 ntBASIC1.67□□□□□ -2.14
HLA-DPB1P04440 MIR98-201ENST00000606724 119 ntBASIC1.67□□□□□ -2.14
HLA-DPB1P04440 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms