Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC0.19□□□□□ -2.38
SPTA1P02549 AL109659.3-201ENST00000624985 950 ntBASIC0.19□□□□□ -2.38
SPTA1P02549 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC0.19□□□□□ -2.38
SPTA1P02549 AC138393.1-203ENST00000327086 343 ntBASIC0.19□□□□□ -2.38
SPTA1P02549 MIR101-1-201ENST00000362265 75 ntBASIC0.19□□□□□ -2.38
SPTA1P02549 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC0.19□□□□□ -2.38
SPTA1P02549 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC0.19□□□□□ -2.38
SPTA1P02549 AL589872.1-201ENST00000426602 288 ntBASIC0.19□□□□□ -2.38
SPTA1P02549 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC0.19□□□□□ -2.38
SPTA1P02549 AL590383.1-201ENST00000428602 75 ntBASIC0.19□□□□□ -2.38
SPTA1P02549 snoU13.9-201ENST00000458927 103 ntBASIC0.19□□□□□ -2.38
SPTA1P02549 MEMO1P3-201ENST00000459811 302 ntBASIC0.19□□□□□ -2.38
SPTA1P02549 AC114982.2-201ENST00000461396 358 ntBASIC0.19□□□□□ -2.38
SPTA1P02549 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC0.19□□□□□ -2.38
SPTA1P02549 SNORA25.11-201ENST00000515935 105 ntBASIC0.19□□□□□ -2.38
SPTA1P02549 RNU6-581P-201ENST00000516214 105 ntBASIC0.19□□□□□ -2.38
SPTA1P02549 SNORA31.22-201ENST00000517204 135 ntBASIC0.19□□□□□ -2.38
SPTA1P02549 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC0.19□□□□□ -2.38
SPTA1P02549 AL391813.1-201ENST00000603098 260 ntBASIC0.19□□□□□ -2.38
SPTA1P02549 AC010900.2-201ENST00000604508 210 ntBASIC0.19□□□□□ -2.38
SPTA1P02549 AC016252.1-201ENST00000609721 474 ntBASIC0.19□□□□□ -2.38
SPTA1P02549 AL590396.2-201ENST00000636511 1041 ntBASIC0.19□□□□□ -2.38
SPTA1P02549 FARSBP1-201ENST00000435808 1778 ntBASIC0.19□□□□□ -2.38
SPTA1P02549 RNU6-46P-201ENST00000383860 107 ntBASIC0.18□□□□□ -2.38
SPTA1P02549 NDUFS5P4-201ENST00000412983 318 ntBASIC0.18□□□□□ -2.38
SPTA1P02549 AC015724.1-201ENST00000478577 156 ntBASIC0.18□□□□□ -2.38
SPTA1P02549 PSMC1P5-201ENST00000512850 177 ntBASIC0.18□□□□□ -2.38
SPTA1P02549 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC0.18□□□□□ -2.38
SPTA1P02549 AC091489.2-201ENST00000566263 604 ntBASIC0.18□□□□□ -2.38
SPTA1P02549 MIR4645-201ENST00000583158 77 ntBASIC0.18□□□□□ -2.38
SPTA1P02549 SNRPGP20-201ENST00000604477 205 ntBASIC0.18□□□□□ -2.38
SPTA1P02549 AL031176.1-201ENST00000604554 466 ntBASIC0.18□□□□□ -2.38
SPTA1P02549 AL365204.3-201ENST00000612448 685 ntBASIC0.18□□□□□ -2.38
SPTA1P02549 RNA5SP361-201ENST00000362686 118 ntBASIC0.18□□□□□ -2.38
SPTA1P02549 RNU6-233P-201ENST00000410845 141 ntBASIC0.18□□□□□ -2.38
SPTA1P02549 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC0.18□□□□□ -2.38
SPTA1P02549 C1DP1-201ENST00000426049 402 ntBASIC0.18□□□□□ -2.38
SPTA1P02549 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC0.18□□□□□ -2.38
SPTA1P02549 AC068135.1-201ENST00000446164 246 ntBASIC0.18□□□□□ -2.38
SPTA1P02549 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC0.18□□□□□ -2.38
SPTA1P02549 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC0.18□□□□□ -2.38
SPTA1P02549 RNU6-488P-201ENST00000515918 99 ntBASIC0.18□□□□□ -2.38
SPTA1P02549 RNU6-965P-201ENST00000516721 96 ntBASIC0.18□□□□□ -2.38
SPTA1P02549 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC0.18□□□□□ -2.38
SPTA1P02549 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC0.18□□□□□ -2.38
SPTA1P02549 uc_338.6-201ENST00000613544 171 ntBASIC0.18□□□□□ -2.38
SPTA1P02549 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC0.18□□□□□ -2.38
SPTA1P02549 AC079416.3-201ENST00000624479 549 ntBASIC0.18□□□□□ -2.38
SPTA1P02549 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC0.18□□□□□ -2.38
SPTA1P02549 MTND4P14-201ENST00000435799 1354 ntBASIC0.18□□□□□ -2.38
SPTA1P02549 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC0.17□□□□□ -2.38
SPTA1P02549 MIR424-201ENST00000362227 98 ntBASIC0.17□□□□□ -2.38
SPTA1P02549 SNORD1A-201ENST00000364968 72 ntBASIC0.17□□□□□ -2.38
SPTA1P02549 RNU4-12P-201ENST00000365233 139 ntBASIC0.17□□□□□ -2.38
SPTA1P02549 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC0.17□□□□□ -2.38
SPTA1P02549 MIR224-201ENST00000384889 81 ntBASIC0.17□□□□□ -2.38
SPTA1P02549 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC0.17□□□□□ -2.38
SPTA1P02549 AC244023.1-201ENST00000426884 112 ntBASIC0.17□□□□□ -2.38
SPTA1P02549 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC0.17□□□□□ -2.38
SPTA1P02549 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC0.17□□□□□ -2.38
SPTA1P02549 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC0.17□□□□□ -2.38
SPTA1P02549 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC0.17□□□□□ -2.38
SPTA1P02549 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC0.17□□□□□ -2.38
SPTA1P02549 AC006199.1-201ENST00000548728 219 ntBASIC0.17□□□□□ -2.38
SPTA1P02549 BNIP3P27-201ENST00000599991 412 ntBASIC0.17□□□□□ -2.38
SPTA1P02549 AC012065.4-201ENST00000602445 679 ntBASIC0.17□□□□□ -2.38
SPTA1P02549 MTCYBP22-201ENST00000603788 447 ntBASIC0.17□□□□□ -2.38
SPTA1P02549 AC242498.1-201ENST00000604134 111 ntBASIC0.17□□□□□ -2.38
SPTA1P02549 UBE2Q2P6-201ENST00000612666 153 ntBASIC0.17□□□□□ -2.38
SPTA1P02549 uc_338.34-201ENST00000617467 174 ntBASIC0.17□□□□□ -2.38
SPTA1P02549 AC243994.1-201ENST00000618627 109 ntBASIC0.17□□□□□ -2.38
SPTA1P02549 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC0.17□□□□□ -2.38
SPTA1P02549 MTND2P41-201ENST00000637599 773 ntBASIC0.17□□□□□ -2.38
SPTA1P02549 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC0.17□□□□□ -2.38
SPTA1P02549 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC0.17□□□□□ -2.38
SPTA1P02549 Y_RNA.559-201ENST00000384686 107 ntBASIC0.17□□□□□ -2.38
SPTA1P02549 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC0.17□□□□□ -2.38
SPTA1P02549 NDUFS5P1-201ENST00000405668 289 ntBASIC0.17□□□□□ -2.38
SPTA1P02549 AC010385.1-201ENST00000412374 256 ntBASIC0.17□□□□□ -2.38
SPTA1P02549 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC0.17□□□□□ -2.38
SPTA1P02549 AKIRIN2P1-201ENST00000505898 352 ntBASIC0.17□□□□□ -2.38
SPTA1P02549 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC0.17□□□□□ -2.38
SPTA1P02549 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC0.17□□□□□ -2.38
SPTA1P02549 RNU6-202P-201ENST00000515998 96 ntBASIC0.17□□□□□ -2.38
SPTA1P02549 RNA5SP255-201ENST00000516370 107 ntBASIC0.17□□□□□ -2.38
SPTA1P02549 NRON-201ENST00000517270 370 ntBASIC0.17□□□□□ -2.38
SPTA1P02549 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.17□□□□□ -2.38
SPTA1P02549 AC124947.2-202ENST00000552735 133 ntBASIC0.17□□□□□ -2.38
SPTA1P02549 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC0.17□□□□□ -2.38
SPTA1P02549 AP001596.2-201ENST00000608410 312 ntBASIC0.17□□□□□ -2.38
SPTA1P02549 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.17□□□□□ -2.38
SPTA1P02549 AC008443.7-201ENST00000622195 246 ntBASIC0.17□□□□□ -2.38
SPTA1P02549 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC0.16□□□□□ -2.38
SPTA1P02549 RNU6-486P-201ENST00000363116 107 ntBASIC0.16□□□□□ -2.38
SPTA1P02549 Y_RNA.288-201ENST00000364854 92 ntBASIC0.16□□□□□ -2.38
SPTA1P02549 SNORA25B-201ENST00000365507 128 ntBASIC0.16□□□□□ -2.38
SPTA1P02549 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC0.16□□□□□ -2.38
SPTA1P02549 SNORD14D-201ENST00000384390 87 ntBASIC0.16□□□□□ -2.38
SPTA1P02549 MIR19B1-201ENST00000384829 87 ntBASIC0.16□□□□□ -2.38
SPTA1P02549 AL591034.2-201ENST00000402839 359 ntBASIC0.16□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms