Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 AC124916.1-201ENST00000444020 547 ntBASIC2.41□□□□□ -2.02
PDGFBP01127 AC011753.1-201ENST00000451001 220 ntBASIC2.41□□□□□ -2.02
PDGFBP01127 AC109927.2-201ENST00000506416 303 ntBASIC2.41□□□□□ -2.02
PDGFBP01127 RNA5SP445-201ENST00000515889 115 ntBASIC2.41□□□□□ -2.02
PDGFBP01127 RNU6-581P-201ENST00000516214 105 ntBASIC2.41□□□□□ -2.02
PDGFBP01127 SNORA31.19-201ENST00000517079 126 ntBASIC2.41□□□□□ -2.02
PDGFBP01127 AC009902.1-201ENST00000519351 183 ntBASIC2.41□□□□□ -2.02
PDGFBP01127 NTS-203ENST00000551529 801 ntTSL 3 BASIC2.41□□□□□ -2.02
PDGFBP01127 AL133241.1-201ENST00000556832 487 ntBASIC2.41□□□□□ -2.02
PDGFBP01127 AL157871.3-201ENST00000557231 293 ntBASIC2.41□□□□□ -2.02
PDGFBP01127 AC025678.1-201ENST00000567861 338 ntBASIC2.41□□□□□ -2.02
PDGFBP01127 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC2.41□□□□□ -2.02
PDGFBP01127 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC2.41□□□□□ -2.02
PDGFBP01127 AC008521.1-201ENST00000587471 187 ntBASIC2.41□□□□□ -2.02
PDGFBP01127 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.41□□□□□ -2.02
PDGFBP01127 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.4□□□□□ -2.02
PDGFBP01127 AL355596.1-201ENST00000565399 3996 ntBASIC2.4□□□□□ -2.02
PDGFBP01127 SNORD115-7-201ENST00000365306 82 ntBASIC2.4□□□□□ -2.03
PDGFBP01127 RNU6-395P-201ENST00000365662 106 ntBASIC2.4□□□□□ -2.03
PDGFBP01127 RNU6-259P-201ENST00000383999 107 ntBASIC2.4□□□□□ -2.03
PDGFBP01127 Y_RNA.508-201ENST00000384502 114 ntBASIC2.4□□□□□ -2.03
PDGFBP01127 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC2.4□□□□□ -2.03
PDGFBP01127 OR51A5P-201ENST00000415429 942 ntBASIC2.4□□□□□ -2.03
PDGFBP01127 AL353621.1-201ENST00000418219 243 ntBASIC2.4□□□□□ -2.03
PDGFBP01127 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.4□□□□□ -2.03
PDGFBP01127 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC2.4□□□□□ -2.03
PDGFBP01127 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.4□□□□□ -2.03
PDGFBP01127 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.4□□□□□ -2.03
PDGFBP01127 AL109913.1-201ENST00000421173 514 ntBASIC2.4□□□□□ -2.03
PDGFBP01127 AL160275.3-201ENST00000423876 471 ntBASIC2.4□□□□□ -2.03
PDGFBP01127 AC000111.3-201ENST00000433478 193 ntBASIC2.4□□□□□ -2.03
PDGFBP01127 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC2.4□□□□□ -2.03
PDGFBP01127 AC132479.1-201ENST00000449160 144 ntBASIC2.4□□□□□ -2.03
PDGFBP01127 MTCO2P18-201ENST00000457151 658 ntBASIC2.4□□□□□ -2.03
PDGFBP01127 snoU109.2-201ENST00000459316 135 ntBASIC2.4□□□□□ -2.03
PDGFBP01127 AC079382.1-201ENST00000493346 557 ntBASIC2.4□□□□□ -2.03
PDGFBP01127 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.4□□□□□ -2.03
PDGFBP01127 AC116655.1-201ENST00000508324 901 ntBASIC2.4□□□□□ -2.03
PDGFBP01127 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.4□□□□□ -2.03
PDGFBP01127 RNU6-295P-201ENST00000516901 104 ntBASIC2.4□□□□□ -2.03
PDGFBP01127 ACA59.2-201ENST00000517061 156 ntBASIC2.4□□□□□ -2.03
PDGFBP01127 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC2.4□□□□□ -2.03
PDGFBP01127 AC012557.2-201ENST00000605919 418 ntBASIC2.4□□□□□ -2.03
PDGFBP01127 RNU6-91P-201ENST00000607774 107 ntBASIC2.4□□□□□ -2.03
PDGFBP01127 U4atac.1-201ENST00000618345 95 ntBASIC2.4□□□□□ -2.03
PDGFBP01127 AC009161.2-201ENST00000624626 138 ntBASIC2.4□□□□□ -2.03
PDGFBP01127 MIR1291-201ENST00000627649 87 ntBASIC2.4□□□□□ -2.03
PDGFBP01127 OR5AK4P-201ENST00000635912 903 ntBASIC2.4□□□□□ -2.03
PDGFBP01127 MIR6863-201ENST00000636112 90 ntBASIC2.4□□□□□ -2.03
PDGFBP01127 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
PDGFBP01127 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
PDGFBP01127 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.39□□□□□ -2.03
PDGFBP01127 AC138393.1-203ENST00000327086 343 ntBASIC2.39□□□□□ -2.03
PDGFBP01127 OR4G2P-201ENST00000328113 903 ntBASIC2.39□□□□□ -2.03
PDGFBP01127 Y_RNA.33-201ENST00000362591 102 ntBASIC2.39□□□□□ -2.03
PDGFBP01127 Y_RNA.40-201ENST00000362645 93 ntBASIC2.39□□□□□ -2.03
PDGFBP01127 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.39□□□□□ -2.03
PDGFBP01127 RNU6-1029P-201ENST00000384109 107 ntBASIC2.39□□□□□ -2.03
PDGFBP01127 RNU6-1179P-201ENST00000384667 107 ntBASIC2.39□□□□□ -2.03
PDGFBP01127 MIR181B1-201ENST00000385240 110 ntBASIC2.39□□□□□ -2.03
PDGFBP01127 Y_RNA.582-201ENST00000391023 95 ntBASIC2.39□□□□□ -2.03
PDGFBP01127 SNORA40C-201ENST00000391285 128 ntBASIC2.39□□□□□ -2.03
PDGFBP01127 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.39□□□□□ -2.03
PDGFBP01127 AL023284.1-201ENST00000403956 276 ntBASIC2.39□□□□□ -2.03
PDGFBP01127 RNU4-55P-201ENST00000410731 137 ntBASIC2.39□□□□□ -2.03
PDGFBP01127 RPL21P90-201ENST00000415692 466 ntBASIC2.39□□□□□ -2.03
PDGFBP01127 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC2.39□□□□□ -2.03
PDGFBP01127 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC2.39□□□□□ -2.03
PDGFBP01127 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC2.39□□□□□ -2.03
PDGFBP01127 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC2.39□□□□□ -2.03
PDGFBP01127 AL583843.1-201ENST00000456070 346 ntBASIC2.39□□□□□ -2.03
PDGFBP01127 AC117503.1-201ENST00000472241 394 ntBASIC2.39□□□□□ -2.03
PDGFBP01127 RPL36AP48-201ENST00000485521 314 ntBASIC2.39□□□□□ -2.03
PDGFBP01127 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC2.39□□□□□ -2.03
PDGFBP01127 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC2.39□□□□□ -2.03
PDGFBP01127 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.39□□□□□ -2.03
PDGFBP01127 RNA5SP503-201ENST00000517047 117 ntBASIC2.39□□□□□ -2.03
PDGFBP01127 AC022880.1-201ENST00000534017 973 ntBASIC2.39□□□□□ -2.03
PDGFBP01127 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC2.39□□□□□ -2.03
PDGFBP01127 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC2.39□□□□□ -2.03
PDGFBP01127 MIR1273C-201ENST00000578669 77 ntBASIC2.39□□□□□ -2.03
PDGFBP01127 AL645944.1-201ENST00000603857 493 ntBASIC2.39□□□□□ -2.03
PDGFBP01127 AL022154.1-201ENST00000604698 785 ntBASIC2.39□□□□□ -2.03
PDGFBP01127 AC245884.12-201ENST00000615364 59 ntBASIC2.39□□□□□ -2.03
PDGFBP01127 AC011155.2-201ENST00000623202 216 ntBASIC2.39□□□□□ -2.03
PDGFBP01127 CR381653.2-201ENST00000624041 768 ntBASIC2.39□□□□□ -2.03
PDGFBP01127 AP003400.5-201ENST00000624827 617 ntBASIC2.39□□□□□ -2.03
PDGFBP01127 ZNF271P-202ENST00000465539 1970 ntBASIC2.39□□□□□ -2.03
PDGFBP01127 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.39□□□□□ -2.03
PDGFBP01127 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.39□□□□□ -2.03
PDGFBP01127 MTND5P26-201ENST00000426018 1752 ntBASIC2.38□□□□□ -2.03
PDGFBP01127 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
PDGFBP01127 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.38□□□□□ -2.03
PDGFBP01127 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.38□□□□□ -2.03
PDGFBP01127 Y_RNA.1-201ENST00000352915 104 ntBASIC2.38□□□□□ -2.03
PDGFBP01127 SNORD3E-201ENST00000362899 217 ntBASIC2.38□□□□□ -2.03
PDGFBP01127 RNU6-1097P-201ENST00000363586 107 ntBASIC2.38□□□□□ -2.03
PDGFBP01127 RNA5SP456-201ENST00000364002 114 ntBASIC2.38□□□□□ -2.03
PDGFBP01127 RNU6-898P-201ENST00000365627 104 ntBASIC2.38□□□□□ -2.03
PDGFBP01127 Z98749.2-208ENST00000381646 500 ntBASIC2.38□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms