Protein–RNA interactions for Protein: O95983

MBD3, Methyl-CpG-binding domain protein 3, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3O95983 AC090578.1-201ENST00000604955 591 ntBASIC2.07□□□□□ -2.08
MBD3O95983 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC2.07□□□□□ -2.08
MBD3O95983 uc_338.15-201ENST00000615470 191 ntBASIC2.07□□□□□ -2.08
MBD3O95983 AC009159.2-201ENST00000617603 606 ntBASIC2.07□□□□□ -2.08
MBD3O95983 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.07□□□□□ -2.08
MBD3O95983 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.06□□□□□ -2.08
MBD3O95983 RNU6-1097P-201ENST00000363586 107 ntBASIC2.06□□□□□ -2.08
MBD3O95983 RNU6-234P-201ENST00000365229 104 ntBASIC2.06□□□□□ -2.08
MBD3O95983 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC2.06□□□□□ -2.08
MBD3O95983 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC2.06□□□□□ -2.08
MBD3O95983 SNORA67.3-201ENST00000384366 140 ntBASIC2.06□□□□□ -2.08
MBD3O95983 RNU6-1179P-201ENST00000384667 107 ntBASIC2.06□□□□□ -2.08
MBD3O95983 SNORA11.2-201ENST00000408318 127 ntBASIC2.06□□□□□ -2.08
MBD3O95983 HMGN1P14-201ENST00000412459 517 ntBASIC2.06□□□□□ -2.08
MBD3O95983 EDDM3CP-201ENST00000415977 425 ntBASIC2.06□□□□□ -2.08
MBD3O95983 MTND3P17-201ENST00000416968 344 ntBASIC2.06□□□□□ -2.08
MBD3O95983 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC2.06□□□□□ -2.08
MBD3O95983 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.06□□□□□ -2.08
MBD3O95983 AL365400.1-201ENST00000431854 640 ntBASIC2.06□□□□□ -2.08
MBD3O95983 CALM1P1-201ENST00000442082 433 ntBASIC2.06□□□□□ -2.08
MBD3O95983 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC2.06□□□□□ -2.08
MBD3O95983 ART2BP-201ENST00000453501 499 ntBASIC2.06□□□□□ -2.08
MBD3O95983 snoU13.14-201ENST00000459372 104 ntBASIC2.06□□□□□ -2.08
MBD3O95983 AC055731.1-201ENST00000474387 401 ntBASIC2.06□□□□□ -2.08
MBD3O95983 AP001025.1-201ENST00000486139 332 ntBASIC2.06□□□□□ -2.08
MBD3O95983 SNORA31.23-201ENST00000517219 133 ntBASIC2.06□□□□□ -2.08
MBD3O95983 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.06□□□□□ -2.08
MBD3O95983 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.06□□□□□ -2.08
MBD3O95983 AC135279.1-201ENST00000543493 504 ntBASIC2.06□□□□□ -2.08
MBD3O95983 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC2.06□□□□□ -2.08
MBD3O95983 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.06□□□□□ -2.08
MBD3O95983 AC090897.2-201ENST00000581715 130 ntBASIC2.06□□□□□ -2.08
MBD3O95983 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC2.05□□□□□ -2.08
MBD3O95983 RNU6-108P-201ENST00000365558 107 ntBASIC2.05□□□□□ -2.08
MBD3O95983 SNORA40.19-201ENST00000390846 128 ntBASIC2.05□□□□□ -2.08
MBD3O95983 AL356379.1-201ENST00000414105 126 ntBASIC2.05□□□□□ -2.08
MBD3O95983 AC008267.5-201ENST00000424928 265 ntBASIC2.05□□□□□ -2.08
MBD3O95983 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC2.05□□□□□ -2.08
MBD3O95983 GAPDHP17-201ENST00000449858 1001 ntBASIC2.05□□□□□ -2.08
MBD3O95983 AC140059.1-201ENST00000489238 361 ntBASIC2.05□□□□□ -2.08
MBD3O95983 RBBP4P6-201ENST00000508098 202 ntBASIC2.05□□□□□ -2.08
MBD3O95983 RNU6-410P-201ENST00000517006 107 ntBASIC2.05□□□□□ -2.08
MBD3O95983 NDUFA5P6-201ENST00000542110 379 ntBASIC2.05□□□□□ -2.08
MBD3O95983 IMMP1LP2-201ENST00000552954 492 ntBASIC2.05□□□□□ -2.08
MBD3O95983 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC2.05□□□□□ -2.08
MBD3O95983 MIR1273D-201ENST00000577266 86 ntBASIC2.05□□□□□ -2.08
MBD3O95983 MIR3126-201ENST00000577443 74 ntBASIC2.05□□□□□ -2.08
MBD3O95983 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC2.05□□□□□ -2.08
MBD3O95983 MIR548AB-201ENST00000584917 84 ntBASIC2.05□□□□□ -2.08
MBD3O95983 RPL30P11-203ENST00000598995 310 ntBASIC2.05□□□□□ -2.08
MBD3O95983 DEFB131E-202ENST00000602581 683 ntBASIC2.05□□□□□ -2.08
MBD3O95983 RMST_7.1-201ENST00000621935 268 ntBASIC2.05□□□□□ -2.08
MBD3O95983 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.05□□□□□ -2.08
MBD3O95983 SNORD115-7-201ENST00000365306 82 ntBASIC2.04□□□□□ -2.08
MBD3O95983 MIR186-201ENST00000384988 86 ntBASIC2.04□□□□□ -2.08
MBD3O95983 RNU2-23P-201ENST00000410545 195 ntBASIC2.04□□□□□ -2.08
MBD3O95983 UBE2V1P10-201ENST00000414685 269 ntBASIC2.04□□□□□ -2.08
MBD3O95983 AC074117.2-201ENST00000417130 397 ntBASIC2.04□□□□□ -2.08
MBD3O95983 AC138623.1-201ENST00000418060 216 ntBASIC2.04□□□□□ -2.08
MBD3O95983 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC2.04□□□□□ -2.08
MBD3O95983 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC2.04□□□□□ -2.08
MBD3O95983 AL445567.1-201ENST00000439121 144 ntBASIC2.04□□□□□ -2.08
MBD3O95983 AC104058.1-201ENST00000448028 297 ntBASIC2.04□□□□□ -2.08
MBD3O95983 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.04□□□□□ -2.08
MBD3O95983 snoU109.2-201ENST00000459316 135 ntBASIC2.04□□□□□ -2.08
MBD3O95983 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC2.04□□□□□ -2.08
MBD3O95983 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC2.04□□□□□ -2.08
MBD3O95983 AC091965.2-201ENST00000512324 613 ntBASIC2.04□□□□□ -2.08
MBD3O95983 AC104136.1-201ENST00000512969 394 ntBASIC2.04□□□□□ -2.08
MBD3O95983 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC2.04□□□□□ -2.08
MBD3O95983 RNU2-53P-201ENST00000516257 147 ntBASIC2.04□□□□□ -2.08
MBD3O95983 SNORA43.2-201ENST00000516652 128 ntBASIC2.04□□□□□ -2.08
MBD3O95983 Y_RNA.717-201ENST00000517106 92 ntBASIC2.04□□□□□ -2.08
MBD3O95983 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC2.04□□□□□ -2.08
MBD3O95983 Z99289.3-201ENST00000605586 594 ntBASIC2.04□□□□□ -2.08
MBD3O95983 AL121992.2-201ENST00000606262 256 ntBASIC2.04□□□□□ -2.08
MBD3O95983 AC093788.1-201ENST00000609356 927 ntBASIC2.04□□□□□ -2.08
MBD3O95983 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC2.04□□□□□ -2.08
MBD3O95983 uc_338.11-201ENST00000619132 160 ntBASIC2.04□□□□□ -2.08
MBD3O95983 AC093648.1-201ENST00000623546 606 ntBASIC2.04□□□□□ -2.08
MBD3O95983 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC2.04□□□□□ -2.08
MBD3O95983 AL354685.2-201ENST00000448218 1447 ntBASIC2.03□□□□□ -2.08
MBD3O95983 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
MBD3O95983 SNORA25B-201ENST00000365507 128 ntBASIC2.03□□□□□ -2.08
MBD3O95983 Y_RNA.576-201ENST00000384781 102 ntBASIC2.03□□□□□ -2.08
MBD3O95983 SNORA40.3-201ENST00000390964 122 ntBASIC2.03□□□□□ -2.08
MBD3O95983 SNORA46.1-201ENST00000391069 153 ntBASIC2.03□□□□□ -2.08
MBD3O95983 CASP3-203ENST00000393588 677 ntTSL 4 BASIC2.03□□□□□ -2.08
MBD3O95983 MORN2-203ENST00000409131 544 ntTSL 5 BASIC2.03□□□□□ -2.08
MBD3O95983 RNU6-607P-201ENST00000411283 108 ntBASIC2.03□□□□□ -2.08
MBD3O95983 RNA5SP111-201ENST00000411386 101 ntBASIC2.03□□□□□ -2.08
MBD3O95983 RPL21P90-201ENST00000415692 466 ntBASIC2.03□□□□□ -2.08
MBD3O95983 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.03□□□□□ -2.08
MBD3O95983 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC2.03□□□□□ -2.08
MBD3O95983 AIMP1P2-201ENST00000425294 312 ntBASIC2.03□□□□□ -2.08
MBD3O95983 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC2.03□□□□□ -2.08
MBD3O95983 GPR143P-201ENST00000434155 205 ntBASIC2.03□□□□□ -2.08
MBD3O95983 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC2.03□□□□□ -2.08
MBD3O95983 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC2.03□□□□□ -2.08
MBD3O95983 UBE2DNL-203ENST00000474922 222 ntBASIC2.03□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 127.5 ms