Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 OR52A4P-202ENST00000481634 799 ntBASIC-0.07□□□□□ -2.42
USH2AO75445 RN7SKP277-201ENST00000516895 283 ntBASIC-0.07□□□□□ -2.42
USH2AO75445 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC-0.07□□□□□ -2.42
USH2AO75445 LARP7P1-201ENST00000605576 316 ntBASIC-0.07□□□□□ -2.42
USH2AO75445 AC004852.3-201ENST00000614131 326 ntBASIC-0.07□□□□□ -2.42
USH2AO75445 AL590396.4-201ENST00000636779 956 ntBASIC-0.07□□□□□ -2.42
USH2AO75445 AC138393.1-203ENST00000327086 343 ntBASIC-0.08□□□□□ -2.42
USH2AO75445 AL138880.1-201ENST00000405824 642 ntBASIC-0.08□□□□□ -2.42
USH2AO75445 MTND4P20-201ENST00000424125 869 ntBASIC-0.08□□□□□ -2.42
USH2AO75445 AL353777.1-201ENST00000425552 326 ntBASIC-0.08□□□□□ -2.42
USH2AO75445 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC-0.08□□□□□ -2.42
USH2AO75445 GAPDHP17-201ENST00000449858 1001 ntBASIC-0.08□□□□□ -2.42
USH2AO75445 HMGB1P36-201ENST00000487709 576 ntBASIC-0.08□□□□□ -2.42
USH2AO75445 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC-0.08□□□□□ -2.42
USH2AO75445 AL513185.3-201ENST00000433335 1300 ntBASIC-0.08□□□□□ -2.42
USH2AO75445 Y_RNA.121-201ENST00000363309 113 ntBASIC-0.08□□□□□ -2.42
USH2AO75445 Y_RNA.186-201ENST00000363899 92 ntBASIC-0.08□□□□□ -2.42
USH2AO75445 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC-0.08□□□□□ -2.42
USH2AO75445 MIR644A-201ENST00000385262 94 ntBASIC-0.08□□□□□ -2.42
USH2AO75445 RNU6-284P-201ENST00000411105 106 ntBASIC-0.08□□□□□ -2.42
USH2AO75445 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC-0.08□□□□□ -2.42
USH2AO75445 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC-0.08□□□□□ -2.42
USH2AO75445 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC-0.08□□□□□ -2.42
USH2AO75445 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC-0.08□□□□□ -2.42
USH2AO75445 MTCYBP34-201ENST00000439552 670 ntBASIC-0.08□□□□□ -2.42
USH2AO75445 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC-0.08□□□□□ -2.42
USH2AO75445 snoU13.9-201ENST00000458927 103 ntBASIC-0.08□□□□□ -2.42
USH2AO75445 AC107297.1-201ENST00000459991 176 ntBASIC-0.08□□□□□ -2.42
USH2AO75445 HMGN1P12-201ENST00000499125 195 ntBASIC-0.08□□□□□ -2.42
USH2AO75445 AC026782.1-201ENST00000512952 449 ntBASIC-0.08□□□□□ -2.42
USH2AO75445 CYB5AP5-201ENST00000549779 389 ntBASIC-0.08□□□□□ -2.42
USH2AO75445 AC093913.1-201ENST00000614178 329 ntBASIC-0.08□□□□□ -2.42
USH2AO75445 AC010809.3-201ENST00000621310 641 ntBASIC-0.08□□□□□ -2.42
USH2AO75445 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC-0.08□□□□□ -2.42
USH2AO75445 AC110792.3-201ENST00000595906 1614 ntBASIC-0.08□□□□□ -2.42
USH2AO75445 SNORD44.1-201ENST00000363202 61 ntBASIC-0.08□□□□□ -2.42
USH2AO75445 SNORD18A-201ENST00000363753 72 ntBASIC-0.08□□□□□ -2.42
USH2AO75445 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.08□□□□□ -2.42
USH2AO75445 AL034374.1-201ENST00000406329 351 ntBASIC-0.08□□□□□ -2.42
USH2AO75445 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC-0.08□□□□□ -2.42
USH2AO75445 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC-0.08□□□□□ -2.42
USH2AO75445 AC090888.2-201ENST00000559765 1144 ntBASIC-0.08□□□□□ -2.42
USH2AO75445 MIR3126-201ENST00000577443 74 ntBASIC-0.08□□□□□ -2.42
USH2AO75445 AC006157.1-201ENST00000611750 366 ntBASIC-0.08□□□□□ -2.42
USH2AO75445 AL078595.3-201ENST00000623815 1166 ntBASIC-0.08□□□□□ -2.42
USH2AO75445 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC-0.08□□□□□ -2.42
USH2AO75445 AL596211.1-201ENST00000569873 2277 ntBASIC-0.08□□□□□ -2.42
USH2AO75445 RNU6-858P-201ENST00000362436 107 ntBASIC-0.08□□□□□ -2.42
USH2AO75445 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC-0.08□□□□□ -2.42
USH2AO75445 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC-0.08□□□□□ -2.42
USH2AO75445 AL353691.1-201ENST00000451332 387 ntBASIC-0.08□□□□□ -2.42
USH2AO75445 AC112492.4-201ENST00000456549 352 ntBASIC-0.08□□□□□ -2.42
USH2AO75445 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC-0.08□□□□□ -2.42
USH2AO75445 AC023632.1-201ENST00000518463 375 ntBASIC-0.08□□□□□ -2.42
USH2AO75445 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC-0.08□□□□□ -2.42
USH2AO75445 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC-0.09□□□□□ -2.42
USH2AO75445 Y_RNA.232-201ENST00000364369 96 ntBASIC-0.09□□□□□ -2.42
USH2AO75445 SNORD14C-201ENST00000365382 88 ntBASIC-0.09□□□□□ -2.42
USH2AO75445 RNU6-1207P-201ENST00000384343 107 ntBASIC-0.09□□□□□ -2.42
USH2AO75445 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC-0.09□□□□□ -2.42
USH2AO75445 AC244098.2-201ENST00000422068 99 ntBASIC-0.09□□□□□ -2.42
USH2AO75445 RPS15AP9-201ENST00000439856 381 ntBASIC-0.09□□□□□ -2.42
USH2AO75445 MRPL42P4-201ENST00000453267 443 ntBASIC-0.09□□□□□ -2.42
USH2AO75445 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC-0.09□□□□□ -2.42
USH2AO75445 RNU6-320P-201ENST00000516511 106 ntBASIC-0.09□□□□□ -2.42
USH2AO75445 AP003716.2-201ENST00000528260 108 ntBASIC-0.09□□□□□ -2.42
USH2AO75445 MIR4315-1-201ENST00000636800 73 ntBASIC-0.09□□□□□ -2.42
USH2AO75445 MIR4315-2-201ENST00000640925 73 ntBASIC-0.09□□□□□ -2.42
USH2AO75445 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC-0.09□□□□□ -2.42
USH2AO75445 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC-0.09□□□□□ -2.42
USH2AO75445 RNU6-945P-201ENST00000383947 107 ntBASIC-0.09□□□□□ -2.42
USH2AO75445 MIR19B1-201ENST00000384829 87 ntBASIC-0.09□□□□□ -2.42
USH2AO75445 MIR153-1-201ENST00000384914 90 ntBASIC-0.09□□□□□ -2.42
USH2AO75445 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC-0.09□□□□□ -2.42
USH2AO75445 OFD1P3Y-201ENST00000453312 783 ntBASIC-0.09□□□□□ -2.42
USH2AO75445 RN7SKP164-201ENST00000516138 266 ntBASIC-0.09□□□□□ -2.42
USH2AO75445 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC-0.09□□□□□ -2.42
USH2AO75445 AC092325.1-201ENST00000566449 554 ntBASIC-0.09□□□□□ -2.42
USH2AO75445 TMF1P1-201ENST00000576058 373 ntBASIC-0.09□□□□□ -2.42
USH2AO75445 Y_RNA.480-201ENST00000384364 102 ntBASIC-0.09□□□□□ -2.42
USH2AO75445 RNU6-1297P-201ENST00000384415 104 ntBASIC-0.09□□□□□ -2.42
USH2AO75445 MIR196A1-201ENST00000388006 70 ntBASIC-0.09□□□□□ -2.42
USH2AO75445 UBE2D3P2-201ENST00000424409 445 ntBASIC-0.09□□□□□ -2.42
USH2AO75445 UBE2V1P4-201ENST00000425374 344 ntBASIC-0.09□□□□□ -2.42
USH2AO75445 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC-0.09□□□□□ -2.42
USH2AO75445 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC-0.09□□□□□ -2.42
USH2AO75445 PCNAP1-202ENST00000595299 752 ntBASIC-0.09□□□□□ -2.42
USH2AO75445 AC073544.2-201ENST00000601155 540 ntBASIC-0.09□□□□□ -2.42
USH2AO75445 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC-0.09□□□□□ -2.42
USH2AO75445 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC-0.09□□□□□ -2.42
USH2AO75445 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC-0.09□□□□□ -2.42
USH2AO75445 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC-0.09□□□□□ -2.42
USH2AO75445 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC-0.09□□□□□ -2.42
USH2AO75445 SUMO2P14-201ENST00000604488 293 ntBASIC-0.09□□□□□ -2.42
USH2AO75445 AC113194.1-201ENST00000606037 500 ntBASIC-0.09□□□□□ -2.42
USH2AO75445 MIR3666-201ENST00000607845 111 ntBASIC-0.09□□□□□ -2.42
USH2AO75445 FTX_3.1-201ENST00000610451 147 ntBASIC-0.09□□□□□ -2.42
USH2AO75445 MIR1295B-201ENST00000636144 60 ntBASIC-0.09□□□□□ -2.42
USH2AO75445 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC-0.1□□□□□ -2.42
USH2AO75445 RNU6-271P-201ENST00000363858 105 ntBASIC-0.1□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 128.4 ms