Protein–RNA interactions for Protein: O75379

VAMP4, Vesicle-associated membrane protein 4, humanhuman

Predictions only

Length 141 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4O75379 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
VAMP4O75379 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC4.2□□□□□ -1.74
VAMP4O75379 RPL9P7-201ENST00000330965 580 ntBASIC4.2□□□□□ -1.74
VAMP4O75379 Y_RNA.152-201ENST00000363578 100 ntBASIC4.2□□□□□ -1.74
VAMP4O75379 SNORD14B-201ENST00000364533 90 ntBASIC4.2□□□□□ -1.74
VAMP4O75379 Y_RNA.314-201ENST00000365114 102 ntBASIC4.2□□□□□ -1.74
VAMP4O75379 RNU6-741P-201ENST00000383889 107 ntBASIC4.2□□□□□ -1.74
VAMP4O75379 AL591034.2-201ENST00000402839 359 ntBASIC4.2□□□□□ -1.74
VAMP4O75379 RNA5SP31-201ENST00000411144 127 ntBASIC4.2□□□□□ -1.74
VAMP4O75379 RPS15AP10-201ENST00000432472 382 ntBASIC4.2□□□□□ -1.74
VAMP4O75379 SETP5-201ENST00000437270 562 ntBASIC4.2□□□□□ -1.74
VAMP4O75379 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC4.2□□□□□ -1.74
VAMP4O75379 AL513043.1-201ENST00000439124 535 ntBASIC4.2□□□□□ -1.74
VAMP4O75379 RPL9P9-202ENST00000466501 579 ntBASIC4.2□□□□□ -1.74
VAMP4O75379 RNA5SP291-201ENST00000517222 105 ntBASIC4.2□□□□□ -1.74
VAMP4O75379 AC009812.2-201ENST00000517657 457 ntBASIC4.2□□□□□ -1.74
VAMP4O75379 AC025755.1-201ENST00000521306 278 ntBASIC4.2□□□□□ -1.74
VAMP4O75379 Z98751.3-201ENST00000604447 521 ntBASIC4.2□□□□□ -1.74
VAMP4O75379 AC007179.3-201ENST00000604976 235 ntBASIC4.2□□□□□ -1.74
VAMP4O75379 YPEL5P2-201ENST00000605553 359 ntBASIC4.2□□□□□ -1.74
VAMP4O75379 AL021879.1-201ENST00000611756 288 ntBASIC4.2□□□□□ -1.74
VAMP4O75379 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
VAMP4O75379 AL355596.1-201ENST00000565399 3996 ntBASIC4.2□□□□□ -1.74
VAMP4O75379 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC4.19□□□□□ -1.74
VAMP4O75379 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC4.19□□□□□ -1.74
VAMP4O75379 RNU6-37P-201ENST00000362692 107 ntBASIC4.19□□□□□ -1.74
VAMP4O75379 RNY1P16-201ENST00000363063 111 ntBASIC4.19□□□□□ -1.74
VAMP4O75379 RNU6-11P-201ENST00000364234 107 ntBASIC4.19□□□□□ -1.74
VAMP4O75379 RNU6-99P-201ENST00000364721 107 ntBASIC4.19□□□□□ -1.74
VAMP4O75379 RNU6-7-201ENST00000364784 107 ntBASIC4.19□□□□□ -1.74
VAMP4O75379 RNU6-8-201ENST00000365467 107 ntBASIC4.19□□□□□ -1.74
VAMP4O75379 RNU6-25P-201ENST00000383873 107 ntBASIC4.19□□□□□ -1.74
VAMP4O75379 RNU6-1-201ENST00000383898 107 ntBASIC4.19□□□□□ -1.74
VAMP4O75379 RNU6-48P-201ENST00000384161 107 ntBASIC4.19□□□□□ -1.74
VAMP4O75379 RNU6-36P-201ENST00000384172 107 ntBASIC4.19□□□□□ -1.74
VAMP4O75379 RNU6-4P-201ENST00000384205 107 ntBASIC4.19□□□□□ -1.74
VAMP4O75379 RNU6-5P-201ENST00000384238 107 ntBASIC4.19□□□□□ -1.74
VAMP4O75379 RNU6-3P-201ENST00000384314 107 ntBASIC4.19□□□□□ -1.74
VAMP4O75379 RNU6-16P-201ENST00000384385 107 ntBASIC4.19□□□□□ -1.74
VAMP4O75379 RNU6-15P-201ENST00000384534 107 ntBASIC4.19□□□□□ -1.74
VAMP4O75379 RNU6-2-201ENST00000384627 107 ntBASIC4.19□□□□□ -1.74
VAMP4O75379 RNU6-29P-201ENST00000384637 107 ntBASIC4.19□□□□□ -1.74
VAMP4O75379 RNU6-9-201ENST00000384776 107 ntBASIC4.19□□□□□ -1.74
VAMP4O75379 RNU6-33P-201ENST00000384793 107 ntBASIC4.19□□□□□ -1.74
VAMP4O75379 MIR591-201ENST00000385290 95 ntBASIC4.19□□□□□ -1.74
VAMP4O75379 RNU6-907P-201ENST00000390924 102 ntBASIC4.19□□□□□ -1.74
VAMP4O75379 Z98941.1-201ENST00000407764 100 ntBASIC4.19□□□□□ -1.74
VAMP4O75379 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC4.19□□□□□ -1.74
VAMP4O75379 NUP35P1-201ENST00000422734 947 ntBASIC4.19□□□□□ -1.74
VAMP4O75379 AL590383.1-201ENST00000428602 75 ntBASIC4.19□□□□□ -1.74
VAMP4O75379 CBX3P6-201ENST00000430257 527 ntBASIC4.19□□□□□ -1.74
VAMP4O75379 AL353705.1-201ENST00000433468 480 ntBASIC4.19□□□□□ -1.74
VAMP4O75379 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC4.19□□□□□ -1.74
VAMP4O75379 AL136097.1-201ENST00000456945 913 ntBASIC4.19□□□□□ -1.74
VAMP4O75379 AC133134.1-201ENST00000466800 359 ntBASIC4.19□□□□□ -1.74
VAMP4O75379 AC093852.1-201ENST00000503587 266 ntBASIC4.19□□□□□ -1.74
VAMP4O75379 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC4.19□□□□□ -1.74
VAMP4O75379 RN7SKP289-201ENST00000517244 295 ntBASIC4.19□□□□□ -1.74
VAMP4O75379 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC4.19□□□□□ -1.74
VAMP4O75379 CBX3P8-201ENST00000532412 525 ntBASIC4.19□□□□□ -1.74
VAMP4O75379 HIGD1AP1-201ENST00000550979 275 ntBASIC4.19□□□□□ -1.74
VAMP4O75379 IGKV1OR2-6-201ENST00000603485 277 ntBASIC4.19□□□□□ -1.74
VAMP4O75379 AC073657.2-201ENST00000605661 303 ntBASIC4.19□□□□□ -1.74
VAMP4O75379 RNU6-6P-201ENST00000606623 107 ntBASIC4.19□□□□□ -1.74
VAMP4O75379 5S_rRNA.12-201ENST00000617631 107 ntBASIC4.19□□□□□ -1.74
VAMP4O75379 MIR4272-201ENST00000635924 64 ntBASIC4.19□□□□□ -1.74
VAMP4O75379 AC008669.1-201ENST00000565823 2178 ntBASIC4.19□□□□□ -1.74
VAMP4O75379 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
VAMP4O75379 SNORA70.4-201ENST00000365509 134 ntBASIC4.18□□□□□ -1.74
VAMP4O75379 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
VAMP4O75379 SNORA40C-201ENST00000391285 128 ntBASIC4.18□□□□□ -1.74
VAMP4O75379 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC4.18□□□□□ -1.74
VAMP4O75379 AC006946.1-201ENST00000429106 328 ntBASIC4.18□□□□□ -1.74
VAMP4O75379 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC4.18□□□□□ -1.74
VAMP4O75379 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC4.18□□□□□ -1.74
VAMP4O75379 RN7SL601P-201ENST00000471221 293 ntBASIC4.18□□□□□ -1.74
VAMP4O75379 AC010655.3-201ENST00000478818 450 ntBASIC4.18□□□□□ -1.74
VAMP4O75379 AC105758.1-201ENST00000506038 399 ntBASIC4.18□□□□□ -1.74
VAMP4O75379 AC109479.2-201ENST00000517842 174 ntBASIC4.18□□□□□ -1.74
VAMP4O75379 HSBP1P1-201ENST00000555205 166 ntBASIC4.18□□□□□ -1.74
VAMP4O75379 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC4.18□□□□□ -1.74
VAMP4O75379 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC4.18□□□□□ -1.74
VAMP4O75379 MIR3944-201ENST00000581277 108 ntBASIC4.18□□□□□ -1.74
VAMP4O75379 MIR3976-201ENST00000606807 139 ntBASIC4.18□□□□□ -1.74
VAMP4O75379 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC4.18□□□□□ -1.74
VAMP4O75379 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
VAMP4O75379 AC008568.2-201ENST00000623862 2313 ntBASIC4.18□□□□□ -1.74
VAMP4O75379 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
VAMP4O75379 AL672296.1-201ENST00000427780 2158 ntBASIC4.17□□□□□ -1.74
VAMP4O75379 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC4.17□□□□□ -1.74
VAMP4O75379 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.17□□□□□ -1.74
VAMP4O75379 RNU6-50P-201ENST00000362356 103 ntBASIC4.17□□□□□ -1.74
VAMP4O75379 Y_RNA.188-201ENST00000363952 111 ntBASIC4.17□□□□□ -1.74
VAMP4O75379 SNORD46.1-201ENST00000364139 104 ntBASIC4.17□□□□□ -1.74
VAMP4O75379 RNU6-1317P-201ENST00000364582 104 ntBASIC4.17□□□□□ -1.74
VAMP4O75379 SNORD14.1-201ENST00000365609 90 ntBASIC4.17□□□□□ -1.74
VAMP4O75379 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
VAMP4O75379 MIR1252-201ENST00000408861 65 ntBASIC4.17□□□□□ -1.74
VAMP4O75379 EIF4EP2-201ENST00000422816 654 ntBASIC4.17□□□□□ -1.74
VAMP4O75379 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms