Protein–RNA interactions for Protein: O75056

SDC3, Syndecan-3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3O75056 MTCO2P11-201ENST00000431069 680 ntBASIC2.21□□□□□ -2.06
SDC3O75056 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC2.21□□□□□ -2.06
SDC3O75056 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC2.21□□□□□ -2.06
SDC3O75056 AL360221.1-201ENST00000445989 335 ntBASIC2.21□□□□□ -2.06
SDC3O75056 AC011753.1-201ENST00000451001 220 ntBASIC2.21□□□□□ -2.06
SDC3O75056 snoU13.23-201ENST00000458863 104 ntBASIC2.21□□□□□ -2.06
SDC3O75056 AC112771.1-201ENST00000463581 102 ntBASIC2.21□□□□□ -2.06
SDC3O75056 AC108210.2-201ENST00000503681 201 ntBASIC2.21□□□□□ -2.06
SDC3O75056 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC2.21□□□□□ -2.06
SDC3O75056 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC2.21□□□□□ -2.06
SDC3O75056 AC079140.3-201ENST00000511111 550 ntBASIC2.21□□□□□ -2.06
SDC3O75056 RNU5B-3P-201ENST00000516601 115 ntBASIC2.21□□□□□ -2.06
SDC3O75056 FAM92A1P1-201ENST00000528023 890 ntBASIC2.21□□□□□ -2.06
SDC3O75056 AP002963.1-201ENST00000530590 184 ntBASIC2.21□□□□□ -2.06
SDC3O75056 CBX3P7-201ENST00000532876 502 ntBASIC2.21□□□□□ -2.06
SDC3O75056 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.21□□□□□ -2.06
SDC3O75056 AC121758.2-201ENST00000553271 193 ntBASIC2.21□□□□□ -2.06
SDC3O75056 AP005136.1-201ENST00000579765 429 ntBASIC2.21□□□□□ -2.06
SDC3O75056 MIR5692A1-201ENST00000580523 69 ntBASIC2.21□□□□□ -2.06
SDC3O75056 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC2.21□□□□□ -2.06
SDC3O75056 PIGPP4-201ENST00000584447 307 ntBASIC2.21□□□□□ -2.06
SDC3O75056 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC2.21□□□□□ -2.06
SDC3O75056 AL670379.4-201ENST00000605279 254 ntBASIC2.21□□□□□ -2.06
SDC3O75056 AC245008.1-201ENST00000608123 476 ntBASIC2.21□□□□□ -2.06
SDC3O75056 AC024581.2-201ENST00000619986 252 ntBASIC2.21□□□□□ -2.06
SDC3O75056 AC244517.12-201ENST00000623581 663 ntBASIC2.21□□□□□ -2.06
SDC3O75056 AC092656.1-203ENST00000624134 423 ntBASIC2.21□□□□□ -2.06
SDC3O75056 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC2.21□□□□□ -2.06
SDC3O75056 SEPT14P19-203ENST00000633205 211 ntBASIC2.21□□□□□ -2.06
SDC3O75056 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC2.21□□□□□ -2.06
SDC3O75056 AC090582.1-201ENST00000636321 199 ntBASIC2.21□□□□□ -2.06
SDC3O75056 U6.114-201ENST00000636407 96 ntBASIC2.21□□□□□ -2.06
SDC3O75056 AC241585.2-209ENST00000638217 143 ntBASIC2.21□□□□□ -2.06
SDC3O75056 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
SDC3O75056 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
SDC3O75056 RNU6-858P-201ENST00000362436 107 ntBASIC2.2□□□□□ -2.06
SDC3O75056 SNORA62.1-201ENST00000364287 154 ntBASIC2.2□□□□□ -2.06
SDC3O75056 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
SDC3O75056 SNORD116-2-201ENST00000384274 95 ntBASIC2.2□□□□□ -2.06
SDC3O75056 RNU6-72P-201ENST00000384285 79 ntBASIC2.2□□□□□ -2.06
SDC3O75056 RNU6-456P-201ENST00000384493 107 ntBASIC2.2□□□□□ -2.06
SDC3O75056 RNU6-1179P-201ENST00000384667 107 ntBASIC2.2□□□□□ -2.06
SDC3O75056 SNORD116-6-201ENST00000384711 96 ntBASIC2.2□□□□□ -2.06
SDC3O75056 RNU6-606P-201ENST00000384721 111 ntBASIC2.2□□□□□ -2.06
SDC3O75056 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
SDC3O75056 RN7SKP158-201ENST00000410453 326 ntBASIC2.2□□□□□ -2.06
SDC3O75056 RNU2-63P-201ENST00000410792 194 ntBASIC2.2□□□□□ -2.06
SDC3O75056 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC2.2□□□□□ -2.06
SDC3O75056 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.2□□□□□ -2.06
SDC3O75056 AC016831.2-201ENST00000417179 352 ntBASIC2.2□□□□□ -2.06
SDC3O75056 AL353621.1-201ENST00000418219 243 ntBASIC2.2□□□□□ -2.06
SDC3O75056 USP9YP27-201ENST00000418455 438 ntBASIC2.2□□□□□ -2.06
SDC3O75056 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC2.2□□□□□ -2.06
SDC3O75056 MTCO2P34-201ENST00000421994 607 ntBASIC2.2□□□□□ -2.06
SDC3O75056 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC2.2□□□□□ -2.06
SDC3O75056 MTND4P32-201ENST00000437189 1237 ntBASIC2.2□□□□□ -2.06
SDC3O75056 AC018634.1-201ENST00000437554 401 ntBASIC2.2□□□□□ -2.06
SDC3O75056 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC2.2□□□□□ -2.06
SDC3O75056 OFD1P4Y-201ENST00000455273 1179 ntBASIC2.2□□□□□ -2.06
SDC3O75056 AC018437.1-201ENST00000492214 406 ntBASIC2.2□□□□□ -2.06
SDC3O75056 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.2□□□□□ -2.06
SDC3O75056 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.2□□□□□ -2.06
SDC3O75056 AC015712.3-201ENST00000559380 164 ntBASIC2.2□□□□□ -2.06
SDC3O75056 RSL24D1P11-201ENST00000591045 491 ntBASIC2.2□□□□□ -2.06
SDC3O75056 AL670379.10-201ENST00000604330 253 ntBASIC2.2□□□□□ -2.06
SDC3O75056 AL670379.9-201ENST00000605428 253 ntBASIC2.2□□□□□ -2.06
SDC3O75056 AC098614.4-201ENST00000607601 462 ntBASIC2.2□□□□□ -2.06
SDC3O75056 AC091834.1-201ENST00000614543 472 ntBASIC2.2□□□□□ -2.06
SDC3O75056 AC245884.12-201ENST00000615364 59 ntBASIC2.2□□□□□ -2.06
SDC3O75056 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.2□□□□□ -2.06
SDC3O75056 AC136475.10-201ENST00000620253 385 ntBASIC2.2□□□□□ -2.06
SDC3O75056 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC2.2□□□□□ -2.06
SDC3O75056 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
SDC3O75056 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
SDC3O75056 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
SDC3O75056 AC005336.3-201ENST00000623833 2679 ntBASIC2.2□□□□□ -2.06
SDC3O75056 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.2□□□□□ -2.06
SDC3O75056 AC138393.1-203ENST00000327086 343 ntBASIC2.19□□□□□ -2.06
SDC3O75056 SNORA3A-201ENST00000364113 130 ntBASIC2.19□□□□□ -2.06
SDC3O75056 RNU6-384P-201ENST00000364900 104 ntBASIC2.19□□□□□ -2.06
SDC3O75056 RNU6-550P-201ENST00000391057 101 ntBASIC2.19□□□□□ -2.06
SDC3O75056 AL023284.1-201ENST00000403956 276 ntBASIC2.19□□□□□ -2.06
SDC3O75056 GSTA9P-201ENST00000406231 611 ntBASIC2.19□□□□□ -2.06
SDC3O75056 FTH1P15-201ENST00000406984 280 ntBASIC2.19□□□□□ -2.06
SDC3O75056 SNORA11.4-201ENST00000408823 129 ntBASIC2.19□□□□□ -2.06
SDC3O75056 MORF4L1P6-201ENST00000418771 268 ntBASIC2.19□□□□□ -2.06
SDC3O75056 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC2.19□□□□□ -2.06
SDC3O75056 AL358934.1-201ENST00000432346 324 ntBASIC2.19□□□□□ -2.06
SDC3O75056 AL596276.1-201ENST00000434465 418 ntBASIC2.19□□□□□ -2.06
SDC3O75056 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC2.19□□□□□ -2.06
SDC3O75056 AC090515.1-201ENST00000465295 476 ntBASIC2.19□□□□□ -2.06
SDC3O75056 GMFBP1-201ENST00000467831 427 ntBASIC2.19□□□□□ -2.06
SDC3O75056 RPL7P43-201ENST00000478876 753 ntBASIC2.19□□□□□ -2.06
SDC3O75056 RPL21P99-201ENST00000480369 423 ntBASIC2.19□□□□□ -2.06
SDC3O75056 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.19□□□□□ -2.06
SDC3O75056 MTAPP1-201ENST00000489154 819 ntBASIC2.19□□□□□ -2.06
SDC3O75056 AC140059.1-201ENST00000489238 361 ntBASIC2.19□□□□□ -2.06
SDC3O75056 HMGB1P30-201ENST00000492455 606 ntBASIC2.19□□□□□ -2.06
SDC3O75056 AF213884.2-201ENST00000510417 903 ntBASIC2.19□□□□□ -2.06
SDC3O75056 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.19□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 129.1 ms