Protein–RNA interactions for Protein: O60885

BRD4, Bromodomain-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 1,362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD4O60885 AL158042.1-201ENST00000605338 460 ntBASIC1.59□□□□□ -2.16
BRD4O60885 AC112220.3-201ENST00000605502 502 ntBASIC1.59□□□□□ -2.16
BRD4O60885 AP000676.3-201ENST00000623299 569 ntBASIC1.59□□□□□ -2.16
BRD4O60885 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC1.59□□□□□ -2.16
BRD4O60885 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
BRD4O60885 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.58□□□□□ -2.16
BRD4O60885 Y_RNA.245-201ENST00000364493 95 ntBASIC1.58□□□□□ -2.16
BRD4O60885 SNORA25B-201ENST00000365507 128 ntBASIC1.58□□□□□ -2.16
BRD4O60885 MIR29C-201ENST00000385231 88 ntBASIC1.58□□□□□ -2.16
BRD4O60885 RNU6-1242P-201ENST00000391052 103 ntBASIC1.58□□□□□ -2.16
BRD4O60885 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.58□□□□□ -2.16
BRD4O60885 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC1.58□□□□□ -2.16
BRD4O60885 SNRPEP10-201ENST00000420249 274 ntBASIC1.58□□□□□ -2.16
BRD4O60885 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC1.58□□□□□ -2.16
BRD4O60885 PTGES3P4-201ENST00000426243 356 ntBASIC1.58□□□□□ -2.16
BRD4O60885 RPL7P34-201ENST00000433316 712 ntBASIC1.58□□□□□ -2.16
BRD4O60885 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.58□□□□□ -2.16
BRD4O60885 ZNF736P11Y-201ENST00000442535 1213 ntBASIC1.58□□□□□ -2.16
BRD4O60885 RPL23AP35-201ENST00000451906 501 ntBASIC1.58□□□□□ -2.16
BRD4O60885 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC1.58□□□□□ -2.16
BRD4O60885 RNA5SP57-201ENST00000459463 123 ntBASIC1.58□□□□□ -2.16
BRD4O60885 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC1.58□□□□□ -2.16
BRD4O60885 MTCYBP43-201ENST00000513621 740 ntBASIC1.58□□□□□ -2.16
BRD4O60885 AC110760.3-202ENST00000515177 371 ntBASIC1.58□□□□□ -2.16
BRD4O60885 ROCK1P1-201ENST00000573767 549 ntBASIC1.58□□□□□ -2.16
BRD4O60885 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC1.58□□□□□ -2.16
BRD4O60885 AC016925.2-201ENST00000605108 242 ntBASIC1.58□□□□□ -2.16
BRD4O60885 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.58□□□□□ -2.16
BRD4O60885 DUSP12P1-201ENST00000612874 516 ntBASIC1.58□□□□□ -2.16
BRD4O60885 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC1.58□□□□□ -2.16
BRD4O60885 DLEU1_2.1-201ENST00000617920 342 ntBASIC1.58□□□□□ -2.16
BRD4O60885 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.57□□□□□ -2.16
BRD4O60885 ICE2P2-201ENST00000483823 2787 ntBASIC1.57□□□□□ -2.16
BRD4O60885 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
BRD4O60885 SNORA4.1-201ENST00000364263 144 ntBASIC1.57□□□□□ -2.16
BRD4O60885 RNU6-278P-201ENST00000390945 109 ntBASIC1.57□□□□□ -2.16
BRD4O60885 RNA5SP465-201ENST00000391195 109 ntBASIC1.57□□□□□ -2.16
BRD4O60885 RN7SKP266-201ENST00000410232 287 ntBASIC1.57□□□□□ -2.16
BRD4O60885 AL359704.1-201ENST00000411586 781 ntBASIC1.57□□□□□ -2.16
BRD4O60885 MTCO2P8-201ENST00000412213 658 ntBASIC1.57□□□□□ -2.16
BRD4O60885 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC1.57□□□□□ -2.16
BRD4O60885 MTCO2P20-201ENST00000437339 673 ntBASIC1.57□□□□□ -2.16
BRD4O60885 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC1.57□□□□□ -2.16
BRD4O60885 AP000542.1-201ENST00000448473 371 ntBASIC1.57□□□□□ -2.16
BRD4O60885 KATNBL1P6-201ENST00000453433 915 ntBASIC1.57□□□□□ -2.16
BRD4O60885 RPL36AP48-201ENST00000485521 314 ntBASIC1.57□□□□□ -2.16
BRD4O60885 AHI1-208ENST00000488690 712 ntTSL 5 BASIC1.57□□□□□ -2.16
BRD4O60885 AC093809.1-201ENST00000509155 340 ntBASIC1.57□□□□□ -2.16
BRD4O60885 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC1.57□□□□□ -2.16
BRD4O60885 SNORA48.11-201ENST00000517015 89 ntBASIC1.57□□□□□ -2.16
BRD4O60885 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC1.57□□□□□ -2.16
BRD4O60885 AC034114.1-201ENST00000520293 285 ntBASIC1.57□□□□□ -2.16
BRD4O60885 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC1.57□□□□□ -2.16
BRD4O60885 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.57□□□□□ -2.16
BRD4O60885 AL391001.1-201ENST00000602747 715 ntBASIC1.57□□□□□ -2.16
BRD4O60885 AC072039.2-201ENST00000608883 439 ntBASIC1.57□□□□□ -2.16
BRD4O60885 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.57□□□□□ -2.16
BRD4O60885 AL356596.1-201ENST00000624230 379 ntBASIC1.57□□□□□ -2.16
BRD4O60885 AC106754.1-201ENST00000562632 1513 ntBASIC1.57□□□□□ -2.16
BRD4O60885 PCF11-AS1-201ENST00000602322 1516 ntBASIC1.57□□□□□ -2.16
BRD4O60885 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
BRD4O60885 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.56□□□□□ -2.16
BRD4O60885 RNU6-723P-201ENST00000383973 107 ntBASIC1.56□□□□□ -2.16
BRD4O60885 MIR1305-201ENST00000408300 86 ntBASIC1.56□□□□□ -2.16
BRD4O60885 RNU6-757P-201ENST00000410334 100 ntBASIC1.56□□□□□ -2.16
BRD4O60885 RPL21P24-201ENST00000413752 448 ntBASIC1.56□□□□□ -2.16
BRD4O60885 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC1.56□□□□□ -2.16
BRD4O60885 AL591704.2-201ENST00000421658 181 ntBASIC1.56□□□□□ -2.16
BRD4O60885 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.56□□□□□ -2.16
BRD4O60885 TXNL1P1-201ENST00000429528 554 ntBASIC1.56□□□□□ -2.16
BRD4O60885 AC004854.1-201ENST00000440356 349 ntBASIC1.56□□□□□ -2.16
BRD4O60885 MTCO3P45-201ENST00000443036 613 ntBASIC1.56□□□□□ -2.16
BRD4O60885 ELOCP30-201ENST00000447108 299 ntBASIC1.56□□□□□ -2.16
BRD4O60885 AL009048.1-201ENST00000450437 298 ntBASIC1.56□□□□□ -2.16
BRD4O60885 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC1.56□□□□□ -2.16
BRD4O60885 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.56□□□□□ -2.16
BRD4O60885 AC013267.1-201ENST00000458227 267 ntBASIC1.56□□□□□ -2.16
BRD4O60885 AC021146.2-201ENST00000504736 556 ntBASIC1.56□□□□□ -2.16
BRD4O60885 ARL2BPP4-201ENST00000506854 471 ntBASIC1.56□□□□□ -2.16
BRD4O60885 RN7SKP265-201ENST00000516448 223 ntBASIC1.56□□□□□ -2.16
BRD4O60885 RNU6-113P-201ENST00000516653 101 ntBASIC1.56□□□□□ -2.16
BRD4O60885 AC019176.1-201ENST00000518519 225 ntBASIC1.56□□□□□ -2.16
BRD4O60885 MTCO2P15-201ENST00000532655 656 ntBASIC1.56□□□□□ -2.16
BRD4O60885 AC023538.1-201ENST00000534576 736 ntBASIC1.56□□□□□ -2.16
BRD4O60885 MRPS36P5-201ENST00000551909 298 ntBASIC1.56□□□□□ -2.16
BRD4O60885 MTND1P8-201ENST00000571424 950 ntBASIC1.56□□□□□ -2.16
BRD4O60885 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC1.56□□□□□ -2.16
BRD4O60885 AC013470.4-201ENST00000619978 986 ntBASIC1.56□□□□□ -2.16
BRD4O60885 AP000484.1-201ENST00000620067 1252 ntBASIC1.56□□□□□ -2.16
BRD4O60885 AC112204.3-201ENST00000623822 332 ntBASIC1.56□□□□□ -2.16
BRD4O60885 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.56□□□□□ -2.16
BRD4O60885 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
BRD4O60885 AC068700.1-201ENST00000565862 3754 ntBASIC1.55□□□□□ -2.16
BRD4O60885 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
BRD4O60885 RNU4-41P-201ENST00000364426 143 ntBASIC1.55□□□□□ -2.16
BRD4O60885 RNU1-139P-201ENST00000391307 165 ntBASIC1.55□□□□□ -2.16
BRD4O60885 RNU6-584P-201ENST00000410350 95 ntBASIC1.55□□□□□ -2.16
BRD4O60885 BTF3L4P3-201ENST00000418879 476 ntBASIC1.55□□□□□ -2.16
BRD4O60885 MTCO2P21-201ENST00000419780 677 ntBASIC1.55□□□□□ -2.16
BRD4O60885 UBE2V1P4-201ENST00000425374 344 ntBASIC1.55□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms